XLOC_043597 (gene) - C. hemisphaerica

Overview
NameXLOC_043597
Unique NameXLOC_043597
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_512:295861..304508+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043597 ID=XLOC_043597|Name=XLOC_043597|organism=Clytia hemisphaerica|type=gene|length=8648bp|location=Sequence derived from alignment at scaffold_512:295861..304508+ (Clytia hemisphaerica)
TTGACGTTGAGTTCTCTTGAAGACAAGATGTCAAGTTTGGTATTCTTATT TATTCTTGTGGTTTTTACTTTAGATTTGTTGGAGGGTTCGCCTCCTAAAC ATGGTTACCAATATAAAGTGAAATCTTTAGGTTAgttgaaacttcaaaaa actttctttaactCGGATGAAAAATCATAAAGGTACATATTATGCCTGGA ATCTCGCtagtacaccttttcgaccgttgtcgcgcggtcaggcgcgtgcc acttaattatatAATCACCCCCCTTAAACTcgacccaatccttttttgac acatttttctcttgtctataggtgcgaacaAAGAACttggacggttttag tgggataaagcggacacaaaaacgcccgcgcggcaattggcggctacggt caaaaaggtgttttcgaacttctattattaaAACTAATTCTCAGTCCCGA CCTCGAATTAGTGGGAGTTAACTGTAtaagataccttatcggggaaaact ttgtcggggaaaagtgacgaaattttgaacaacgaaattttggacaagtg acgaaaattttccccggccttaatgcgtttaccaactacccaccaagtga cgaatttttccccgacgaaaatttttactgacgaaaattttccccgatga agttttccccgataaggtaataaTAATGCATCCAAAAACACATTAAAACA TATAATTTGTTAGGAAATTAGATCAAAATTATAAACGTGTAAACAGTGAC AGATCTGAGAGGAAACACTCCCTCTGGTATATAAAGTACTTGATTTAGCT AACTTTCGATGGCGATAGTAAACTTCTGTTGTCACGTTACCCTTCCTTAT CTTTGCTTGTCTTTGGAGCCTGTGAACACAATAACCATTCATTATACCTT GTGCGCCacaaaaaatttctctctttgaaactgattttttcgaaatctaa gaATTAACAAACAGCAATTCCTATTCcatcagaaagaagaaagataaact taaattttgatgggtcatttattaaattcgattcattggatcaaaagtta tgctcaattgaataaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaatcgac ctatcaaatttttattttaaaattggcaatcgcaagaggctttacatgat taagaacattttttcagtaattaaacacataaatgtCGAAACTGATGgaa cgaaagggtttaaaatgttcattaaaatcatttcaatttacttttaaaga aattttccacagatttttggttctagactggataaagtctatgtaaggca tttttttataaattttaccagattttttggcttttttcgacgaaacttct gccttttattgaaattcaatcttcctttataTGACAAACGGTCaattaga cagctaattatcatttttaatgactgaaacgaaaatactgatgcatcatg ttattatgcttctgtttaatttgaaaggtcgatttttaacgtttttgagc actttcagaaagtaacctttttattcaatagagcataactttcgatctaa tgaaccgaatttaataaattacCCATCAAAAGTTAAGTTTATATATCTTC TTTCCAAttgaataggaatggttcttttaaaatttttagatttcgggaaa attagttttaaagagagaaacctttttgtggcgcacccggtagaacTAAA AAATAATGCCCAGAATGAGCAATTTGGGGAAAGATTCATAAAATTGACTT GAGGTTGCGTGctagtaccttatcggccaaaacttagtcggccctaaaag tgactaaattttggcttggtgactaaaatcagggccgactaaaaattatt gggccaaattaaaagatTATAATTTActtattttccagtattttaagtTT TCTTCTATTTTCCATCTACTTGTCAATTTAaaaatggcccaaatttttag tcggtcttaattattagtcggcccttagtgactaaatttgacgaggtgac taaaattagggccgactaataattaaggccgactaaggtttggccgataa ggtagggTTGAAGTGCCGAAAACCAAAAGAGAAAGGTTGAAGTCTTTTTC CGGGCGGAGCATGTGACTTTATACCTTTTACATTATTCTTCCAGATCAAT GCATCAGTCATGACTTTTCACCTATTGGATGTATGAAACAAAGTGATCAT GATCGAAAGAAATCGGACTTGGTAAGGAATTGATTGGATTGATCTTTAGT CTCTTCATGAAATacacccttgtctcacagccccggtggaagtttttcct cagtggggataaaaattcctatgtgaatggttttggagtgcaattttcga gcAATCAATTTCCTAGTAGGACCGAAATTCCAGGGTTTTTTCCCATTGGG CACGAAATCCTTGCTAAATTTTCCGGTGGGGCTGGGGTCGCAGCGGGTCT GTGAAACATGTAGCTCTTTGTTTATCCAGCGTTTATCGTTTATTTATCGT AATTATATCATGTTTCTGTGAAAACCAAACGAATAAAGCGTATtgatgat atgcaccattgtaatgtcttccacggatcCAACAACTGATttggttgaaa gtgatgtattgactgattttacgtcacttacaaccaatcatcTGTGAGGT TTATTGTGTTATATGTCGAATATAATAGAGATGAAAACAGTGTAACTGgg ttaatgaaaataaaatgtgaagTTGGTACTTATAGGTGCTTTGTATATGA GTGGACAAAGACTGACATAACAGAAAAAGAATAcatctcttctttttttt agatCCTTACAGGGCGTGACCCACACAGTCCTTCATACAATGACAAAGAA CACGCCCATGTTAATGATGGGTTATGGACTGATTACGATGAATGGTTACC AAATTTTATTTGTCAGTaagtatacacgctttttttataagaatatactt tataagaatgtccatgataaaaatagccaaaagattaagaatattccaag aatatcaccattatggaatttggcaactgaagaTTAGAATGTAATTTTTA GAGCGTTTTCAGTTATAAATTACTAATTATCCCCAAGTTAGTCTCACTCC TTTTATAAAAGTGCCagtttatgcttgagacgtatgtttcaaatgttaaa tctagtttgaattagggtcttaacctaagaatgctgtaagtatagtttag gatgattttcccccaAAAGTTAAGAATCATGAAATGAagaaacaccattc ttataaaaaaagcttgtgtTCGTTTCTTTATAGGGAACACGCTTATAAga aacttgaggctgaaaatgattcAAAAGATAAGGAACTgatcaggctgaga ataagaaaacaagttaaggAACAGAGAGTTGAGCTTGAACATGCACACTA TTGCCTAGGCCTAaacaaaaagatgacaaaatatTGACGAAACAACATTC AATAAACGTCTTCTCCTGTACTGTAGTCCATTGTCATACCTATATATAAG TTACATACTTAGTAAATCCCATATTAGCAGCGAAGTAAATAAGGAACTTG ATAAGgaaatttgaggctgaaattctctgcaAAAATAAGAAACTCAAGGC TAGGAGctaagttaaggttccttacaaaaaaagcgtgtattttatGACGT AAGTATCACGAGAGGTTTTCCAGTGTAAAATTTGCAGACTCTATTACATT CTACTGAAAATACAgtagtctccataactcgaccACGCGCGGAGaacaaa gattttttcgaattatGGAAGAATTATGGAGTTATGgagtaataaaaaaa aactcttgaaGTTGAATAATCTTTTGAAATTGATAAactcgttttctttt gtttagatGTGCAAACGAGCTTTACCAGAAATATCCGAACAGTCAATCTC ATATCATTGGCATAGGTTACTATGGTAAGTCCAAATCCCGCTTCATTAGA CCACACCCAAAGGTTAGTGGAAATTTTTTACCCCCtcccctgattttcaa aaaattaacctGGTAACCACCGCCTGTATGTAGATAAAATGGAATGAACC ATTAGATTCTGAACGttaatctttttatttcatttagcGGAATGCTGGTC GATTTCAAAACAGAATTTTGAACGTCTCCTTAAAGAGAAAGGAGTAAAAG CATTTTCTCATCAATGTGTCAAAAccgattttaagaaatttttccCTCTT CGACCGAAAATAGAAAAGTGTGGAAGTTTTAGTGGTAAAGATGACACCAT GTTTGTTTACAAGGTTGCCAAGCAACAAGGTGAGCGCTtttgtctgattt ttttttctgaatttttataCCGTCATATCCTTAATTTAATGTGACCTCTA ATGAATGcagataaattattttgacaaaTTATGCTTAAATCAACTAGAGT AAAAAAATTCCAGTTTCCGTAAAACCGTAGGGACCGTAAGGACCctattt ccgaaattccgtcgATATTTACGTCAAACCCCCCCCTCTCCGTtcgaaaa aagggtcgattccACTCCTCCACCAACAGTGAACAGCGCTGtgttgaaaa attttattttcattatatCATTTTGTTACTTCAGATTCTTGCAAACAATT TTATGTTCAAAAAGGATGCAAGAAAATCGAGAACGATACCACTGGCAAAT CCCCCAAACCAAAAGGTTTACAAAAAGTGATTGTTCTTGATAAGAATGAT AAGAAATTGTTTTGTACATGTTCCAAAGAAGCCATTAAATCAGGACATCG GTATTTCTCTGTCAATCGCCAAGGTAAGCTTTTTGTTGACATCCCTTCTA GGTTGTCTGTATACAGACCCAGTcagtcggaaccactacatagaaatggc aactattgccttaacgggaaatatttcccgaacgggaaggtgaaagtaac ccaaaaaggaaactgtttccagattgaaaatttcatcacttttctgtttc ccgtttTGGTCAAGGGCTTTTCAttgttcccgaacgggaagttgaatttt gtaaacaaagcagatttttgtttcccgatcgagaagaagtttccaaatag ggaagtttttaattgggaatggGGAAATTAGAATTAAGAACGATTACCCG GTGAAAGGTATTTatttaccctcttttacaatagGCATCATTTATTTACC TTCCACGACCATTTCCGGAGTGCGCAGAAGTCacattcccgatcgggaaa ctggTTAACTTCCTGATTCGGAAACTCTAtccatttcgggaagtttttca ccttcccgttcgggaaatatttcccgttaaggcaatagttgccatttcta tgtaATGGTTCCGACTGCAAGTATCTAcgactaatttcaaaattcattgc gataaacgtgagatacactctggtacagagtactcACTAGGCTGctcggc agattttttttccttctgaAACCTGATGCAGACCTGATTTAGCGaccgaa gacctgaattaacgcTGCGCAAATCCCCTCTCCGATATGTTTTTGATATA AGGGGATGctaatcgtgtataaaattttcgtccgagagttaccccaaaAT TAGggtaacctgtttcaattttcttaaaaacgtttagaaatccaatgatt gtattaGCCTGctctagccattcaaatttttaattcaaatttaaagaTCT ATCAAGTAACTAATCAAGCtaatcaattttctaaaacTAAAAACAAAGAC GGGGGTCCCTCCCGGACAAGAATTTTATTCATGTCgcacatcccctatat caaaacatatcagtgGGGATGCGTGCAACCTACCTTCTCACAGACTGGTT GGGATCCCCGTCCAATGAAAGAAAtggctaaaaataaaaatatcgtTTTC AGTAGAAAACTATACTCCAAATATtgtcccgctgaaaataattaatttaa CAAACCCTTACTTCAAAATATTGTGCATTTTTTCCATCTccaatgaattt tctgacttgaaaacaatggaattcaaatcacAAGCCATAAAGAAAAATCG TCGGAATATCTATCTTCTTCGAGTTTCAGTCCGCTATTTTTACCGCCCGA CTGGCTAAAAAATCCTGCGGGGTCTATGCGAAGGGATTGTTTTTATGACC TTTTGTTCTTTGATTTCTTCTCTTATctaagactttttttctttctcacc CCTCTCACTGATTATTTAAAATGACTGCTCTACTGGGGGAAGTAGATTTC TCTTCTAGCCTGGGAGATGCGGTCATaggtaaatattttcaaaacatgca tatctcaaaatattttccagtacagttgacgctctctaatccgatcttca aggggaattacCGATTTTCATCGAACAAGgaagcttatcgaataagggag catcgtttatgagagtttcttaaggGAGCCtattgaatagtagaacgtca aattagagagcgtcaactgtatttatttTTCACCTCTGCAATGTGTTTTT TCTTTCTCAGGTAAATGCTTTCTATGGGATAGTTCAGTCATGGAATTGGA GCCTTCGGAGAAATGTTACGATAGTGCGTCaaaacaatgcccaaaatatc GATCCAGTTGTAAATCTTCGCCACATTGCAGTGGCCTCACATCCTTGGAC CATCAGATCTATGAAGCAGTACAAGGTATTGCatttttcctttgtttgat tttgcgATTATTATCTACCCCTCCCGTATCTCAGAACCCATTTCAATCTC CTGTCAACTGGATAAAATTCAGCTACAGTGCAAGGTACCCATGCCACAGA TTTGTGCAAAGCCCGAATGACTAGATAGAGTGCTTTAAGTTTTTCCAAGT AAAAaagaagtgaatatcgcaaaaagaATTGTTgccattattttcgaaaa tccaCCAATTTTGGATTTAACGCAGGTTAAATCGTGGTTTAACTTTATTT GATAAGCGCTACATATAATTTTAATGCCTGGGTGACCGCCCTCCGCCAAC TGAGTCTACTATATCATGTTCATAATGGCCGCTGTAACTGAAAGCTGAGA GGATAAAATANTCaaaacaatgcccaaaatatcGATCCAGTTGTAAATCT TCGCCACATTGCAGTGGCCTCACATCCTTGGACCATCAGATCTATGAAGC AGTACAAGGTATTGCatttttcctttgtttgattttgcgATTATTATCTA CCCCTCCCGTATCTCAGAACCCATTTCAATCTCCTGTCAACTGGATAAAA TTCAGCTACAGTGCAAGGTACCCATGCCACAGATTTGTGCAAAGCCCGAA TGACTAGATAGAGTGCTTTAAGTTTTTCCAAGTAAAAaagaagtgaatat cgcaaaaagaATTGTTgccattattttcgaaaatccaCCAATTTTGGATT TAACGCAGGTTAAATCGTGGTTTAACTTTATNaagtgaatatcgcaaaaa gaATTGTTgccattattttcgaaaatccaCCAATTTTGGATTTAACGCAG GTTAAATCGTGGTTTAACTTTATTTGATAAGCGCTACATATAATTTTAAT CCCTGGGTGACCGCCCTCCGCCAACTGAGTCTACTATATCATGTTCATAA TGGCCGCTGTAACTGAAAGCTGAGaggataaaataatttttacctccctc cctgcctgcagttatggttgtaggcgATCCTCGCTTATTTATGCTACTAT TGTATTTAACGgaacaaattttccccaaacttattattcgaggattagcc ataaaTTTACGCCAAAGCTATATCTACCGACTCACACTTATTTCTCAGCC GTCTGACTAATTGATTGTTTTCTAACCCTGATCTAAgtcataggcaaatg gaaagttgAATTTCTGATttgtcaagcgctgaaattctattttaaTGTCA CGTGATTAGGTAGGATTATTTACCCAATACATTCatgaataaatttattt taCCATTACAGGTCCATTTGCATGTGAAAAAAATCCATGTAAGAACAAAG GAGTATGCTCATCCAATCGACTTTTCTCTTTTAAATGTAAATGCCCGAAA GGTATTTCTGGTGATCGTTGCCAGATAGGTATAAATTGTTTTTACACGAC TcacactatttataagcatacagaAGCTTACATTTGCAAAAAGAATAAGC ACAATGCTAAGTATAGCTCGAAGCTTGGAACGTTcatcattttgactttt tcactTGCCCAAACCATAATAAGTGCTTCTTTTTGACGACATACTGCATC AGGCAGTTTTAACCTAAACTTTTGAAGTTGAGCCATTACTtatgaaattt tagaaaaaactttagttatggaaaaatggaataagattttttttataagc attccacttataagcatatctaggctcagatatggcaaGAATTTAAGCAG ATACTAAGCATTGCCTTGAGCCTATATTTTCcgattttggctgttttttg ctggaattttacggattttcggaATTCACCAAAGCTTTTTTCAGCTTTGA CATTCTATAGACCTAAGCAGTTTTTGGATttgtgtatgcttataaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070027TCONS_00070027Clytia hemisphaericatranscript
TCONS_00070028TCONS_00070028Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070028-proteinTCONS_00070028-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_512supercontigscaffold_512:295861..304508 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.05 0.12 0.03 7.44 4.75 291.2 311.38 602.85 596.26 304.18 468.8 1.89 1.14 0.02 0.07 0.16 0.15 2.36 0.06 0.08 0 0 0.06 0 0.05 0 0 0.03 0.03