XLOC_043697 (gene) - C. hemisphaerica

Overview
NameXLOC_043697
Unique NameXLOC_043697
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_514:146172..154796+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043697 ID=XLOC_043697|Name=XLOC_043697|organism=Clytia hemisphaerica|type=gene|length=8625bp|location=Sequence derived from alignment at scaffold_514:146172..154796+ (Clytia hemisphaerica)
aggaccatttggtaacgtgatcaaaaactgagcaaatggatttttatctt ttgatattgacaaaggaaaaagctacCAGAAAGTTagaacaataagcttc cagaccagggttttttatatgGACTATGGTGTAAGAGAATATTCTGGGTT TTTTTATTCGCATGATTTGAAGGACTTCGAAGATAAAGATAACAATCCAA GACAGACGAAACTTAAACAAAGGCATATCCCTAAAGTTTTTATCAACAAT CTCGAACTCTACTTTCCGCCTGAGCAATAACAGTTAAATTTGATTTCTAA AttcaaatcaacaaaaaaatggaacttttttgtttcaaaatgatTCTATT GCCGTGTATTCTGCTGACTGGTTTTTTCTTCGGTGACATCAAAACGAACA CTATAGAAGTGAACCGAAAAAATGGTTTATCCTTTGGAGATAATTATGTT CCACCAGGTGGTATTGCAGAATGTTCGAGATACGGTGGTGTTGAGTTTTT TTCGACTTCTTGCCAATGCAAAAATGCTCAAGGGATCTTGGGAACGTTCA CAGATCAATGTGACTATGACTTGAAAGCTAGCTCAGGTATGTATTATTAG TTACACGGACTTCTTGAGGTAGGATACAGTATATCGAGTTAttaaaaacc gtattggtggtGAGGCTTGCCAAGGTTAGTGGAATTTTCATGTTCGTTGA ATCTTCAACGGACTGTGTGATCCTTTTCTCGTCCTATTTCAATTAAAGGT TaacaaaacttaaatttttattgtttttaaggGTGCGGGTGGCAGATTCA TCAAAGCAATTCACCATTTTACATGGATAGTGCGACTGACATTCTGAATC AAGTTTTTATTGGCACTGATAAAACAACATTCGTAACAAATTGCAAGGAT ATCGCATACTTAGGAGCTAAGATATTGGAAAATGGGGAATGGAATTCTTT TGCAGCTGATCATTTTGATACGGTGAAAATCGGTAATCGATACCAACTGA AGGTAAGAGCAGACAGTCACGAATACATCAATTTGTATTAaaggttaaag gttttatttttacataagtgaatccgtttcatatcagacacatatttcat atcaggacagtgtctgtctattgttatattatgctgatataagcaaaata atgtttttcttttcttctttttgaccgTTCTTGCTCCACAATCGTGTCAA TCTAATGTGAAAAAGCGTGTGAAGTAAAATTGACGAGtaggcaaacgata tcacttttatttaaaatcaaaacctttAGCGCACATTTATTCGACGTCCT ATATTcaatacgctccattattcgataatattgagaCTTATTGTCAACAG GAAAATCTCATAGACGACGCTCTTCTATATTCCACATGCTTCCTTCTCCG ATGAAAATCAAATCccctttgaaaattgaataagacAGCTTGAAATGTAT CACCCTGATTGTgactcaaatatcttaaacaATAGGAAAAGTATACTAAT ATCGATTTTCTTTCTGAGCGTTTAACCCTTATAGGATACGGATAATTTAT GCCCAAAAAAGTGTTCAACTTTTAATCGAGTGACTGTAACCATTGATCTC AAAGCGCCAGAGGGGCTAAACGCCTGGATGTGAAATGAAGTCGCTCATTT TCCATTCAGAACAGTGACCCGTGTGTTTTCCAAAGATTTCTTTAGTGCGG GGTAAACTTAACGCTTCACTTTCTCTTGCTTGAGAaaagttgaagattcc tctctagtcCCTTCGGGGCTTCAAGCTCAATGACCATAACTCAATACATT AACAGTATCAGTTGAAAGTGGGTTAGAAAGAAAGTCAGCGTACTAAAATC ACCTTAAAGAACACAATTGAGCCTGATCATATAATGTTCGTAGGGAAAAT ACAACTTGTTCTTAGAATAATGATTTTCATCCATTCTATTAAAGTGGGTA AATGGCCAGCAGCCAAATACTCAAACCTGGACTGCAAATTATGTTGGACA ATTGTTTAAGATCAATCTAGGATGTGTACCATTGGAAGGAGGTCAACCTC AACCGAGCTGTTTATTGgttaaaataaaaggaaaaagagGTACTTATTTa tatatacacccctgtgtcacagaagCGCTGAgagcccagccccactggaa aatttggcaaaagtttcatccccggtgggaaaataccctggaatttcaac cccactgggaattttgatttcatccccatggagatttcaataaaaaattt taattccaCTGAGGAAAAATTTCGACCGAGgctctgagacaggggtgtat atatAATATATCAGTCAAATTTAGGGGCAGCGGTACCAAATAGTAATTAC TAACTTTGAATATAAAGACACTCTCCTCTTGGTAATTAAACCTGTGaaca tattataataacattgtATTGCAAATTAAAGATTTGGTCATTAAATTAAT TCAGCAAAATTGCATAATATCTTTGCATCACTACAATGGGTACGGGGGCA GATTTAGCTTTTtacaattaaaattatttttcaaatatttcgaaCCGATG TACtgtgaaattttgatttctagAATATACTATTGGAGATCTACCGACCA CAACACCCATAATACCCACCACCACAACACCACAAAACACCACACCAGGA TTAACAGATCAACCAACCAGTCCAACGACAACTACACCAAAGGATGGAAC GACCCCATTTATCGACCCCCCGATTACCACAACAACGATAACCGTAAGTT TTATCATATCTTTACCGTCATTAACAATGGATAAAGCTTTTAGAAGATCT TCTTCAGGCAAAACTTGTCCAAACATTCTTGACTTTCAATCACGATTCTA CTTTTTACAGGGTgaagaagatgatgatgatCCGGCTGGCGTTGTTATTG GTGTTCTCTTTGGAATAATCTTTTTCATTATATTGGTTTTGTTAATCATA TGCTGCTTGCACAAAAAGTAAGTTTGTTATTCGATACCGTACTAACCTAC GACAATCCAAAAAGCTCCGTAAACAATCAAATTGATCTGATTGGTCTTAA TCTCAAAATTATGGTGTAATTGAGCTAAATAAACCAATCAATGCTCAGAA AAAGCGTTTGATTGTTTAGGGAACTTTTGGATTGCTATAGGTAAGTACGG TACTTTTGAGTATACTCTCGGGGTGGGGGTATTTTTCGGAACGTCTGCCA CTAacaatgaaatttttattgacACTAGAGAAAGATAAGATGTATGAAAA AACCTTTAGGTATAAAAGAAGTACCGTTATCTATCGCAAATACTTAGTAT CAAGTTTTACCTAAGCACCCTTGTATCGGAATCATTTTCACTGGCTTGAT ATCCTCCGGATCTGAGAGAAAGAAGTGCCTTCCCGGGGAATTACAAAACA GTGAGGAATTAGCACCGAAAGTGGAGCGATCTGAGGAACCAATAATAaca ctgaattttaaaaatattttttggccaTATAGGGACCAATTTAGTAGATC GTGCGCACATTTTACCAAAAGAGATCAGCTATTATTGCATTGTTACTCTT CTTTATTCTTATAGCGAGAAAATTGATGCAAGTATAATGGTCAATAAAAT ACCTGTTAAAAAAGCTCGCTTATATTTTCAAGATCATGAAACGAACAACA ATACGAAATGGTTCGGAAAGGTAAGTTTTTGAGTTTCAGGTTTTTCCCAG CTTGGTATGAAATAATGCGAAGGGCTCTTTAAAGTCAGATATGAATGAGC ACCtctgtctcgcagccccggtggaaaCTTTTCCCCATAGCTGAGAATGA AAGCttctatcaaaatcccaatgggatggaaattctattgtgTCCTTCTC AAAGAATCCAAGGTGGGATGGCTGTTACATTGAGTTTGAAACATGGGCGa aacatagatttataaagcccaaagaGCTAGATGTTGTGCTTTGACAGAAA AGTGTGctgaggttaggtaggaaatcctacctaagtcacatgacattaca ataaaatttcagcgctTCACCAAACAAGCAATATtgttttgcgatattca ctttttttgcttggaaaagtttaaagcacgatatctagcccttcgggctt tacagaaatctgtgagtgaaatcaaagtcaattttccaaaattggcTGAC GGATAATAGTAGCAGAAAATGAAATCGAGAGGGCATGCCAATCACAATAT GATTTATGAAAACAACTGTAGGAAAGTGACCCTTTTTCTCGACCTTGATT CTCGAGTCAGTAGGGGGTAAAACTAAAATCTGAATAGCTATGGAGAATTT CAATGTTACATTTAAATGGGTATAAGAGTTCAGTGTAGCTTTCCATTGAG CAATTTAAGATTATTTTCTCACATGGGATGCACGATATGATTTTCCAGTG TTTtatgatacaggggtgtattctGACTTATTTTGACTTCAGGGAGTTGA AAGGCAGCCTACAGCTCAACCTAATCATTACACCAATCCAGCCGTCACTT TGAATAGAGACACCGTGGATGCTCCCGGTAAGATTTGGTTAATTTGTTCC CATATTGTTTCTCCATTAcatttcttagtgagttccccACCTAACTACGT TAAAAAGGCCAGTATACGCTAACTCAGTAGTGTAGCCAAGAGgtgcgcaa aatttgtgtaggaaagcagatttttatgagacAGTAAtcatctttttata ttatgaatagataattcaaaaaaatctgctctcctacataAATTTTGCGC ctctcttggctacgctactgctAACTATACCGGCTAAGTTCAATTTTGTT ATCTCTTTATAACACCAAATTAGTACCTCCTTTGTTTATGGTCatactga tttttctatttgacGATTTCTAGGTAATCCGCCGAGGAAGTTGAGCTTTG TACAAAATgcgaaaaataagatttttgggAAGAAAACACAGGATACAAGC GTTGTTATCGAGAATGACAATACTTATGAGGAAGTAAGTTCTTTAATAAG ATGTGATACTCATGGGAGGCAAATCAAAGGCGAATTTCATTAAATACTAA ATTCTTAGAAATCACATTGTCACATTGGAGTCAACTGTATTTCATCTTTC CTTATTTACAGATCgaacaatttcaaaaagacAGACCATCATATGTAGAT ATTACAGAACCTCCTCGAACACCCACAAATCCATCATCACCCGGAAATGA ATTGACAGTACCAGGGCTTGGAGGTCTGAGTATTGAAGAAGACATTTACG CAACGCCAGATAAAAGCCCTGCTCTTCCCTTAAAGGTTGGTTTGAACGCT TAATTTGTCTCTGTTTCATGTACACCAGTACTTGTTTCGATTATTACTTT TGTTTTGGCAGTTTTGCCAAGTGACCGTGAGAAAGTttttgtcgatttag agtagtctgctgaaaattgctaaaaaaataatcaCATCCAGgatcagcca aattttaggtgttctaaNAAAagttaagaacgcatttaagaacattttag gttgaaaattgctaaaaaaataatcaCATCCAGgatcagccaaattttag gtgttctaatgaaagaaaaaacgtgtatcaggAAAATCAGTCAATTCTAT CCAATGACTTCTCGTGGAAACAAGACAAGATGAGCTTTCCAATgaacaaa gtttgaaaatcagcCTAAAATTCCTGATAACAAGAAGCTTGTTTTACCTA GCTAGTCACCCCCGGTctacttttttctaaaatcttttCTTGTCCAGCAT CGTATGGTAATAAATTAGCTTTGAGGCAATCTGCCTTGGTTCACCAAATA AATAATTTCTTCTGGTCTTAATATTTGTTTGAGAAAATGGAGCACATTAG AAAacagactttttttttaattcaacaaCCATTTTCTGTTTCAGGGTGAT ACACTCTCATTAGCGAATGGCCATTATAAAATTCCAACAGGGAGATATGA CGTAAGTGGGAGAATTCAAACGAGGTCAACTAATCTGACTAGGAATCGAG ACTCAAAAATGTGATTAAAACTCACACCACTGCACATAGCtcttttttgt ggtttgatgaGAATGTTTTATCCAGTGCCCAGGATCCAGTGATACCCCAG CTGTCACTAAACGTCTAAAAAACGTCCAGCAAACATCcctaacgtccaaa taacgttgtaagaacgttaaaacaacgttgagTGCCAGCTAGGACCCAGG GAGGATTCGATTCAATAATGACCTTGCGCGCAGCCCAAAACTAGGCCTTT GAAATCTGTCCCTCAcaatgcagagaaaattttagaaattttttgagaat tttgatgagaaatcgacccttacggtgcattttctttaaagttttgagCA TTTAAGACAAAATatggtcaaatttttgcatttttttactttttggctta aagtctcgctggaaagactcactttgattttttttgcttgaccatgaaac ccaatccaattcctacgagttagaccaaaaatgacgatttctaactcaaa ctgggcattacagaaGGGCTTTGTAGCCCATTTCTAGTATACTCGTCATT GGTACTTAAAGCCGATCTGACATTATGTTTTCCAaggtctgaatcgctgc ttcaaaataaaaagcaagTCATAAGTCACAATAGACTCACGAAGAgatta acaaaattttcaaattttgtatcCAATCTTTTTCCTTAGAAAGCCTCCTT GAAAAAGTCGAACAGCAATGCGTCATCTTTGGACGGATGGAGTGAAGACG AGTTTGATGACCACGAGGAAGATCTTGAagtagaagaagaaaagaaagat cGATATCTCCAAGCTGAAGGCGAAAATGATAGCTATTTAGGTTAGTATTT ATATGTTAAAAATCAATATGGGTAGAAGATGGGTGAAAAAGTGAGTTGTG AATGCGCTTCTAGAGCATCCGAAATAAAGACTTTGGAGCATTCTCTTATT CTTTCTTCGTCAAAAATTCTTGCAGGCGCAATACTAGTATGATATAACTT TTCAGTTAGATTTTCTACGCCTGCATAacttttttaaagtttgaaatata tCTAGTAAGGTTAAAAGCAAGAATATATGATTTAAATTTCGAatgtattt attgaatattgatgataataatttcttttatttagGTGATGAAGATCTGG AAGTATCTAGCCAAGAACCCATAGAGGACTGCAAACAACCAACCAACATT CCACCTCCAAAGAAACCGTCTACTGCCTCCAACGATTACAGAGAACTTGA GTTACCTCCTGTTCCTCCACAGGCCCAAGAGTCAATCCCTGGTAGTAAGC GACCATCGATAGGTGGGCTACCTCCCATCCCAGATCAAGCTCCTTCCCCA CCTCAAGGGACCAATAGACCTCCAATACCAGGAAACCGTCCAAATATACC AGCAGGCAGACAACGACCTTCCTTAGGTAGCTTACCACGCCAACAAACGC TACCAGATGGCACAAATACAAGACAACCCTCGGTACCAGATTACAAAGAT AATGAACTACCATCACCTCCAACAAGCCAGAACCAACAGCCTCGTTCTCG AAAAGCTTCTCTACCAGCCTTCCTCTCTAAAACCAAAAGCAACGAGCCAC GCTCCAGAAAGCAATCCTTACCACCTCCAGCTATAAGCAACCCAGTCAGG AAACCATCATTCCAGGATTACAAGAATAACATTGTTCCGATTCCTGAACC ACCAACAGAGGAGACAAGATATCCTGGCCAAGACATCTATATAGCAGATA GTGATATTAATAGAAGTTTGAAACAGGTGTGTATCGGTCGTTAAAGATTT TACTAAGAAATGCCTTGACCGATCAGAGTAACAAATGAAACATAGTAACA TATAGTAAAAAGCATATCGGTTAATTCCACCAGTTcgattttcaattatt ttgagagtttttaTCCTATTAGTCTGGTGCTGAAGCCGGGTAAAAAGAAC AGTTATTTTATAAATCTTGAATATTTATGTTTGAGATAAACACTGGAAAA GACAGATAAAACCCCTTTAAAGGTCCCAGGACGGCCATTGCACGACTTTC TAATGCCCTTCACATCTAAGAGAAAAGGGGTGAAGGGCAGATGTCACTTT TGTGTCACCGATAACATATTGGCCTTGGTTATTTCTTTCTCGTAGAGAAA ACTATCAACAAATAACACTCAATATACTAGAATACTTATTGGTTGCTTGT TGGGCAACCTACAACAGGtaatttcctttttatttttgttcttatagagA AAACCAGGACTGCCTGTGGTATCAACGACAGCAACTCCGAATAAGGAAGA ATCCCCGAAAGAAGACACTAATGGCGACAAAGATGATGATGtatttgaag atgaaaatgatgacAGATATCAAGAATTAGGTAATGATGGGAACAACCAA GATATATATGTGGATCTCAAAGAAGCCGGACAAGAATGATTATATAATAT CAATCTTACATAATCATTTcataacattatatataaaattttttgatatt caataagtaaaactttaaatattattaaaaatatTGGGTAAAAGTGATAA GAAAAGACTAATCTAAGCCGTTTCTGCAATTTTGTTGGTATCTGAACCCT TTCAAAAAAGAACATTATTTTCAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070166TCONS_00070166Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070166-proteinTCONS_00070166-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_514supercontigscaffold_514:146172..154796 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.01 0.01 0 0.09 0.03 0.07 0.02 0.02 0.24 0.04 0.02 26.28 19.74 0.01 0.05 0.13 0.08 53.92 71.55 0.3 0.27 0.03 0.03 0.1 0.04 0 0.02 0.04 0.01