XLOC_043798 (gene) - C. hemisphaerica

Overview
NameXLOC_043798
Unique NameXLOC_043798
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_53:25233..31680-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043798 ID=XLOC_043798|Name=XLOC_043798|organism=Clytia hemisphaerica|type=gene|length=6448bp|location=Sequence derived from alignment at scaffold_53:25233..31680- (Clytia hemisphaerica)
TTTTGCGCCAAGTTACACGAGTTCCCTTTTTGCCTAAATCTGCCCCAGGT TTTATATCTCAGGATTTGAAAGTGCTATTGACTTGAAATTTTGACTAGTG TTAGGTATTGGCAATACAATATACAAGCTTGCTGTCAAAATTTGAGCGAA ATCGGATAAGTGGTTATGCAGAACGTGAGCATTTTGGGTAAAATACTGAC CGGTCTGTAAAATACCAACTACGCAGGGGACAGAACTGAAATTTTGCACA CTGCCTTATATGGTTAATATCTATCACTGGTGAAAGTCTCAAGTCAAAAA CTATATTTTATTTTATAGAAATTTCGCAGGTCTATTGACCTCTATGAAAC AAGATTAAAATTTTATAATGCAGTAGCGTAGACAAGAGGGGCGCAAACTT TGTGTAGGAGAGCATGTTGAGTTCATGGAAGACATGGTAGTGGACAGCAT TGATGGAAGAAATAAATCTGGAGACAAGTTGATGTACAAGTAAATAAACT ATCTTCTTCTTACAGCAGTTTAAATCGAAGTTAGAAGCTCGCAACTGTGG TACCATTTTGGTACGGGAAAAAGAAGACTAGAGCCGAGACATGTGAGACT AAATGTCCGGTAACGACTAATATAAACAAAAGCAGAAAACGAAAGTGGTC GTCAAATTATCGACACCCCAACTTGACGACTACTTCGACAAAAATGCAAA AAATGTATACATAACAAAATTCCTAAGCAAAAAATAGCCTAAAAAATAAT CAATCTAGATTCCAAAGATAAAATCTGAAGATTTTTCCAATAGAAATTTC TTGGGCGGTTTTGTGAATATGTCCGCACAATTGTCATTTGATGGAATATA GTTATAGTTAATCAGGTTAGTGTTCTGACACTCACGTACAAAATGGAAAC GGATATCAATATGTTTCGCCTTTGAGTGATTGGTAGGATTTTTGGACAAC GCTAGGGCTCCTTGGTTATCACAATACATAATAGCATATAACTTTTCACT TAACATCTCATTAAGCAAATTTCGCTTTAAATAAACAATTTCCTGCGAGG CGATTGACATAGCAACATATTCTGCCTCACATGTGGATAATGCAATACAA TTTTGGCGTTTCGATTTCCATGGAATGGGAGGACCAGCAGGATTTAATGC AATACAGTAACCAGAAATACTTTTCCGATCCTTCGAGGCAGCCCAATCAG AATCGCAGAAGGCAGTGATTTGCAATCCGTCGGTCGATTTCGTATATTTC AAACAATAATTTGATGTCTTTTGCAAATAACGGAATACATGTTTCAGCAT CATCAAATCAGCTGCTGTTGGACACGATAACTTTTGTGATAGTTTCGTAA CTACATAACTCAGGTCGGGTCGCGTGCAGACCATGGCATAGATAAGGCTA CCAACCATTTGACGGTAGGAGGTTTGGTCGACTGGCTCGTCTCCTTCCTT TTCGTACACTTCCGGATTCGGTTCACAAGGCGTTGCACGTGGTTTACAGT TGGACATGCCAAATCTCTTGAGGATCTTCAAAATATACTCCTCCTGACTC ATGAGGATTTGGCCTTTAATGCGACAGAAATCGATGCCGAGAAAATGCTT CAACATTCCAAGATCTTTCATTTTGAAGGCTTGGCTCAGGTGCGATTTGG TGTCGGTCATTAACGTTGGATCATTGGACGCAAGCATGATATCATCAACC CATACAAGTAAATAACTAACGGAATCATTGATTGATTTTGTGAAAAGGCA AGGGTCAGCTTTCGATTGAACAAACCCATTGTCCTTAAGATGATCATGAA AAGTGGAATTCCAATTACGACCACTTTGTTTAAGTCCGTACAAGGATTTC TGTAGTTTCCAAACAAAAGCAGGGTTGGTTGGCTTGTATCCTTCTGGTGC GTTAACATAAATCTCCTCCTCAATAGGTGCATGAAGAAAAGCGGTTTTGA CGTCCATCTGCTGGAGATCAAGATCACGATGGGCAGCAACTTGGATAAGG GTACGAACGGTTTCCATTCTGGCTGTAGGTGAAAAAGTCTCATGGTAATC GATACCTTCAACTTGAGAGTATCCTTTTGCAACAAAACGAGCTTTGAAAG TCGGGTTTTCAGGGTCACCTTTCAAATTAAAAACCCATTTTCCCCCAACT AACGATTTATTGGAAGGAAGCTCTTTTTCGATAAATGTGTGATTCGATTT CAAGCTCTCAAATTCATTGTCCATAGCTTGTTTCCATTGCTTGGCTTCTG GACAGGACAGGGCTTCTTTGAAGGATGCAGGTGTGTTAACGTGGTAACAA TAATGCACGAATTTGGCAGCGTCAATTTCATCAGGTTCATTCTTTGGTTC ATCTGGGATTGACGGTTGTTGACGTGATCTGAGAGGATACGATTTCCATG GTTCAGATTTAGCGGTGACGGTCATAGGCTTATCGTCAGATGGATCTGGT TTGACGGTCGGTTCATCAGCAACTGGTAAGGTATCGTCAGCAACTGGTAT TTGGTTGACTGTGGGTAGAAATTTTACGAGACGATGTTTTGAGACTGCTT TGGTTTCAAGGTCATAGACTAGGTAGCTGGGACTATCTCGATCGTATCCG ACAAAGACTCCTTTAGATGTCCTGGGATCTAGTTTCTTTGGTTTGATGGT GATAGGATAACAAATCGATCCGAAAACTTGAAGTCGAGCAACGTCTGGTT TGGAACCGGTAATAAGTCCATACGGAGTGTTCTTAGTCCGCTGACTGTAG CATCGGTTACGGATGTGAGTTGCAGTCATGACGGCATACGTCCACAGATT CTTGGGTAAACCTGCCTCTAACAATAATGATCTAGCCATTTCAAACAACG TGCGCCAACTTCTTTCAGCGGTACCATTTTGATGAGGTGAATATGGGGCA CTCTTCTCATGTTTGATTTTATGCTTAATCAAAAGATCACTGAACTCATG AGAAATGAACTCCCCACCATTATCTGATCGAACACGTTTTGGCTCTCCTG ATGGAAAAATGTCCTCATGAAAACTCAAAGTTTTAACCTTTCCATACGGG GCAACATCAGCTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGGTACCATTTTGATGAGG TGAATATGGGGCACTCTTCTCATGTTTGATTTTATGCTTAATCAAAAGAT CACTGAACTCATGAGAAATGAACTCCCCACCATTATCTGATCGAACACGT TTTGGCTCTCCTGATGGAAAAATGTCCTCATGAAAACTTTAACCTTTCCC ATACGGGGCAACATCAGCTAAGAATTTTTCTGTGGCACGAGTGGTGTCTG ATTTCTCCTTGAGAAAATAGGTAAACATATTTCCTGAATAATCGTCAGTA AACACAATGGCATATTTGAAGCCATCCTTAGCAATTGGATCTATAGGTCC AGAGAGGTCGGTGTGAATCAGTTCAAATGGCTCAGTTGCTCTTACGTCTG GGTTACGGTTGCGAGTATTCGGTTGTTTGGCCATGATGCAGGTTTCACAG TCAAATTTGGTTTGGCTGTCACTGATTTTCATTCCCTGGACTACGCTCTC CATCTTCAGGATGTCAGCCGTGTTGCAGTGACCAAGAATACGATGCCACG TTTGAAGGCTCTCTGAACGATTAGAGTTGACGACTGACTTGCAAAGGTAA TACAAACGTTTTTCTTGGAAAATTGGAAAAATAGTTCCATTTGGTGCGAT AAGTTCATTCCTATCCTCCGAAAATATTACTCTACAACCGTGACTTGTGG CTGATTTAACAGAAAAAATGCATTGTGGAAAGTCTGGAATAAGCAAAACA TCTCTCAACTTTACTTCAACAAATTCATTTTCGTTGGTTCGAAATTTGGT AATAACAGTTCCCTTCTGTTTAGCCACACCATTCACTGTTGTACCATCAG CTAATTCGATATAGTGGTCACTTGATTTGAATGTCGAATCAACGTCTAGG AAACACGACTTGTCATTCACTATGTGAGTAGTAGCACCACAATCAACGAG AAACGTATTCGAGCTAGCTTCAATGTTTGACTTTGTATCACTAGCTTTGA AAGCAAAAGAGTGATCTTCTCCTTTGGTGGACGTTTTGTTTGCACTGTCC TTTTTCTTCCTACACTTGTTAGTGTTGTGACTTTTGTTTTTACAGATACT ACACCACCGACCTTTACTCTTTTTGTCACAGCTGGTTGATTTGTGTCCTG GAGTTCCACAGGAGTAACATACGATTGGTTTCCTTCCTTCCTGGGCATAG AGTTTCATTATGGCGGAGGATTGATCAGTAGGGTTAGATTGGGTTCTCAA ATTTTCGGTTTCTTCAAAATGTCTAAGAGAAGTTTTAAATTTTGCAAAGT CAGTAACATTTTCTGCTTGAGTTGTAACTGCCACAAAAGCCTTGTACTCG TCTGGTAAGCCTTTTAAAACCATTGCAATCAATAACGAGTCACTCCCATT CATCAATCAACCTACAGGCCCATTATAAATTACCTTTCTGGACATTTTGC TTAGCTTAAAAGGAAAAGTTTTTCTTTTGTATTTTCTAAGTATCTTTATC TTTTAAACAGGGACAAATGGACCTGGATGTATGGAACGAGCCATTATCAC CACTCCAGGTATGTGATTTTGCAGCATAGACAATAGATAACCTGAATTAT TCCAATTATGTCTTCCAAATTGATGTCTGCGGTTACTGTTTTGTTGCTTT TCTTGACCCATGTCAATAGGGAAAAGGATAATAACCAAAATGTCTTTCAT TCTTAGCCATGCATGAAAAGATTGTGCAAAAGATTGGAGCTGAATATGCG AAGAAGAAATTCGACCTACAAACTTTGATATCGTACATAGACCAAGACTA CAAATTTAGACGCTCGTTTATTGCCGGACTTGCCAAGAATAAAGATCACC ATGTGGAGGTGCTAAAGAAATATCCATGCTTTCAAGATCACAGAATGGTA ATTTTTTTCTTCTTCTTTGAATGGGTTAGATGCTTTCAAAGCTATCATTA TCAAAGATGTCTTTGTGCCTTGGATCTTTTCTTACTAAATTCCCCTTATA AGCATAAGCAGATTTGCTGATTACTTAGGCATAGCAAGCATACAGGCCTG AAAATAATTTTGTAAAGTTTACAAAGTTTGCTCGAATATATTCCCCTTAA ACAGGAGACATAGCCTTTACTTTGCACTTATTTTCCATGTATTAAACCGA TAAGCATACTACACGCATGATATTCAGCCTGGATTCGAGCCTGACCTAGC CTGACCAAAGGGCATACACTATAAATACGTATATGTTTGGAACTCTTTCT CCCCTGGACGTTTATTTTAGCCCAGCTTTTCCTATATACGTTTATTCAAG TTCCATGTACGTCTATTTATTCAAGTTCTGATTTCACGTCTGTACGTTGT TTATTAAGTCCAGTTTGATATTATCTTTTGTATGTTTACTAGAGACTCGA GAAGTTTTACCATTCATACAGGATTTAGTATAAAAGTTTGAGATTTCCAT TCAAGAACTCCCAAATTTCAAATTCAGGTAATCCACGAAGCATTTCAAGT AATCGAACACGAACGAAAAATCAAAAAGCTAACGAATTGCAACACCGACC GACTAGAGGTTGAAATCGACCATTTAATAACATGGGCAACTCTAAAACTT CAGATGATGCCTAAAGACAATAAGCCAGGTAATTAAAAACTCTTGTCACC TTTAAGGTAGAAATTTTGGCGCTCAGAGATAAAAAATTCCTTAAACCTCA AAACCTGGCAAAACTTCTACCTTAAGGGAACTAATTTTTGCGGATTTGGG CCCAAACCGCAAAATTTAGTTCCTGAAAATTTATCACATGCGAAAAACTG GTCAAATAAATCACAAAATAGCTCTAATTTTCTTCCAAGTGAGAATCCCG CTAAGTTAATTTCCCGCAAAAAATCTCAAAATTGCGAACCGCTAAAATTA GTTCCCTCAAAAAAGGTAATTTCAAGATTGTTTGATTCATCTTTTATAAA ATAACATTTCCTTTCCACAATCCTTCAAGAAATATTTGAAACAAAGGGGA ATTCCCGGTGTAATTTTGAACACCACAATTGATTTTTAAGCGCCTTAAAC TACAGTTGGAAAGTAGAGTTTTAACTCTGAGTNTTATTCTGACAAAGTAA GTGTCAAATTTAGTTTTAAAATTTCACTGCATCATCAAATAAGGGGTTTT ATTTAAGTAACTATTTAATTAACTAACTTTTATTTAACGTTCAAATTCTA AAATACAGTACTTTTACTTACAATGCCCCCTACAATCAGACACACATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070324TCONS_00070324Clytia hemisphaericatranscript
TCONS_00070323TCONS_00070323Clytia hemisphaericatranscript
TCONS_00070322TCONS_00070322Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070323-proteinTCONS_00070323-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_53supercontigscaffold_53:25233..31680 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34 0.35 0.18 0.57 0.68 0.67 0.8 0.88 0.39 0.51 0.4 0.87 1.47 1.88 0.92 0.57 0.46 0.58 0.24 0.43 0.49 0.4 0.09 0.69 3.46 2.37 0.1 0.16 0.1 0.11