XLOC_043876 (gene) - C. hemisphaerica

Overview
NameXLOC_043876
Unique NameXLOC_043876
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:533349..537022+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043876 ID=XLOC_043876|Name=XLOC_043876|organism=Clytia hemisphaerica|type=gene|length=3674bp|location=Sequence derived from alignment at scaffold_56:533349..537022+ (Clytia hemisphaerica)
TCGTGtgcaaaaagtagaaaatattAAGAGAAGAGAAAAAGCAGTTGtct
tgtgttttgttttgttttgaaagcgAGAGATGGCGAACATTGAGCAGAAA
TTACGGTTGTTGCAACCAAAACCAATCGACCCTTCAAAATGTGATCCAAA
TAAATCTTTGTACTGGCAGATCATCGACAACAATCAAACTGCATTGAATC
GTCAAGCCAAACAATTTAATTTGGGAAACACCCTCAAGTTTAATGACCCG
ATCAAAGCTGCCATGTTTCTCCTTCAAAGAGAGTACGGTGATTCTTCTCT
TTTCAAGAAAGATGTACATGAAGCTGTCTTTATACCTCCAACGTTTGTTT
CCAATCAATACATGAAAAAGTCACCTGTAGCTATTCTTGAGTATGAAGTC
AAGAAAGATATTGATAGACTTTTGGACAATTTGAAAGAACATTCACCTGA
TTACTGGTTGACAAAAGAATTACAAACCTTCCTGCAAACACAAAATGGTG
ATGATGATTGTATCGATAAGAAGGCGTTCGATCAATGGATAGTGAACCTG
AAAATCATGTATTTAGTTATCGAGGATCAAAAAACAGATAAGGTGACTTT
ACCGTCAACAACGTCAGACATTGGTGTTTTTGTTCAAGCTTGCATCAATG
ATCTTCCGTCGACACCACCAAAAATAGCATTAAAAACCTTTCTGAGAGAG
TCTGTTATAAAAAAGGGCTTCAAAAAGCTGCTTAAACAGAAGATCGAGGA
TAATCCACCACAAGATANCAAAAAAGGACTTCAAAAAGCTGCTTAAACAG
AAGATCGAGGATAATCCACCCCAAGATTCAAACCTTCGATGGCTTTTTGA
ATTAGAATTGACAGAGCTGGGTGAACAAATTGAACATTGGTTTTATGATC
AGTTATTGCCGCTTAAAGATGACACTCTTCAGGACACAGTTGTTCTTTCA
TCTGTCAATTTCTTAACAGacgttaaaaagaaaagaaatcggGAATCAGA
CCTATTGATCATCTCGTGGCAAAGACAACTCATCATTTCTGTCGAGatcc
cagacggcacacaacgtcaaaacaacgtccatgtgacattcataacgtcc
aaataacgttatttgaacgttaaaacaacgtccatgtgacattcataacg
tccaaataacgttatttgaacgttaaaacaacgttgtgtgccagctggga
tgaaACGCGAGCTCAGCACTGATCGAGTGTTTCAACAATTGGATTCGAAC
CATCAATTATTCGAGCAAAGATTGGGAGATCAATTTGAATCTGGATGGAC
CTTCTTCCCCGTTGTCTGTGTCCAAAACAGTTCCATTTCAAACGCTAGCC
CACATTTCATCATCATGGGGACTGATATAAAGTCATGGTTAACGAGTATC
CTTGGTAATTTTCCGATCGTTCAAATTGCTCATAGACCAACTCCACTCGA
TCAAGttcaaaagcttttaaaaattGTTGTGTTTTCGATTCACGTTTCAA
AGAAGGACCTCGTTGCACCCATAACCAGTTCAAACTGGGTGAAGTATATC
GCAGACGCCATCGAAAATGTTTCAACAAGCGACAATATTCTATTTTATTC
CACTCAACAGATGGCAGCACTGAATAGCAACGATGCTTGCTATAACAAAT
TGATGATTCTTGGCCCATTTGGTGTGGGAAAAAGCATCTTATTAAGGGAC
AAATCCATCCAACTAAACGAACAGCCAGGATACAAAGGGAAAGTGATGTA
TCTGTTAGGTTTTACACCTGGTAAAAAGTACCACAGTTTATTGTGTTTCC
GTTTGATGGTCGATTTGGAAGAGAAGCACGAATCAAAGTGGTGGAAATTG
AAAGCGGACCGGTAAGTTTACAGAAAATCATTTTACTTCATGAACCCAAG
GCCCAAAATGGCCGTAACGAGCTTACTGAACATtgggtcattccatttta
tgTCCATACAGggttggacgaacatttccagggggtgactTAAacagaat
ttccagggggtgactTGAGCAGAATTTCCAGGGTTTCTAAAAGAgtgttg
ttttaaattttttccaaggggtaaaagactgatttcagTTCGCCCAccgt
cactttaaggtatgcaaagaaatcttgcaaatttttctattttccagGGT
Gtccacacatttccaagaaatcttttttgactagaaaaggttcgtccacc
ccctgtgtggaaatttaatggaatggcccattgtaCACCAACAGTTTCAT
ATAGTTTAATGGAACTTTGCATATTAGCAATAATCAATCCCCATTGAAAG
GGTGATTTGGCCCAAATGGCCCAATTACGTCATCAAGGGTCCTATACAAG
TCGAATTTTGAAAGTCTTGAATGTCTGAGCAGTGGAAGTTTGATTCTTTC
CATCATTTCAACTCGTTGGGCCGTTGAAGAAATTGAGTAGTTTGTTATTA
AGTTTCGACCATCGATGGCCTTTCTCAattaaaaatgctgattttttATG
TGCTGTGACGTCACCGTTgttctttttcaatttatttcatatgagatgat
tttttataagatacttctcaataattggtcatttgaagtaataaaaatga
cgcgttctttagaaaaagtaacaaaattgttttattactgtttaacgacc
aaccaaatcaaataagagcttgtaaaaactccatctcgtcccgttTATTT
TTCAGAAAGACGACCAAGAGGATCAGGATAAACTTTTTGAACAAATCAAG
CAAGATGGCATCAAAGCTGTGTTCTGTGATGAGTTTGACTTGGATTACAA
AGAAGGTTTGGTGAGAAAGGTTTCCGAGATTGTTGAATACCTATGGGTCG
TCCCATCAACTCAAGATTTAAGCAATGCAAAGTTGGAAAAATGGGAAGAT
GAATTCACCTTTCTCAATCTCGAACAGAACTTTCGTAATGCACGAGAGAT
TGTGAGAATGACGAAGTCTGTTAGTGAGGAGAAGCAATACAATTATAAGA
ACGGTATCGTTTTGCCTCCTGAAAACTTCCCTTCCGGATGTACACCGATA
CTAGTGGATACTTTCGTGGACGCGATGGTGGAAGCACGGAAACGAACCAA
AGATGGAATTTTGATCTTAGATGATACTACACCAAACCGTTTCGACATTT
TTAATCAGGTGAAGGAACCATGGAAGGCATACCACAACAAACGAAATGAT
TTCAAAGAAGAAGAGAACCCATACAAGTATCTACAAGAGGGAAAGGTTTT
GATCACCAACGAAGTAGTATCGTTAGGTTTCGAATGGACAACACTTATAA
TATTTGAAGGCAGACTTGCTCCACCGACTTACCACGAGTGTAACTTTATG
ATGAGGTGTACCACAAACCTCATCATTGTCAAGAAAAACAAACCCTCACC
CTGATGATTCccttataaatatttttaaaacatgaAGACACTGGGAACGA
ATTTACAagacagttttttttaaatgagagaTAATACAAGCAGCAGCAAT
GTATTATATTCACCAGATTCTGCAAACGGACTCGCAATAATGAGCCGAGt
taattttgtttcatttaGCCACAAGCCATTTTCGAAGATGGTAGTAGTAT
TAGTATAGCAGCAGtaataatatttcattttctcatCGAGTTTATTTtcc
tcgattttttttcttaatacAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070470TCONS_00070470Clytia hemisphaericatranscript
TCONS_00070471TCONS_00070471Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070470-proteinTCONS_00070470-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:533349..537022 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23	0.38	0.38	0.45	0.5	0.18	1.97	2.85	0.86	2.48	1.33	1.29	3.14	2.86	5.91	7.11	3.72	2.78	3.95	4.39	2.36	1.87	2.77	2.85	1.52	2.41	2.44	3.68	1.04	0.97