XLOC_043909 (gene) - C. hemisphaerica

Overview
NameXLOC_043909
Unique NameXLOC_043909
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:785505..794099-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043909 ID=XLOC_043909|Name=XLOC_043909|organism=Clytia hemisphaerica|type=gene|length=8595bp|location=Sequence derived from alignment at scaffold_56:785505..794099- (Clytia hemisphaerica)
CTTTCATCTGGATAGCTTCGATGCAATCTTTTACATTGCTCTCATTTTTC TTATAGAAGCAAAGATAATTTAAAAAAAACGTAAAAAAACATGTCAACAC TATCAACCAATGAAGTGGCAGCAAAAAAACCGGCACCCGAACAAACTCCG GCCCAGACCTCAAACCCGAAGGAACCTAGTACCCAACCCTCCACGTCAAG CGATGCAGCTGGTTCAAGTAAGAGTACTGGGGGAGAGGGTAGTGGGAAGA AAAAATTGATAAAGAGCACTTCTTCGGTGAGCGACCTTCCCATGGCAGGG GCATCTATGGACAATGATTCTGCAGTTTCTGAGGAACAAGAAGTGGAACG ACGAAAGTTACAGTAAGGCTTTTTTTCCTTTGCACATAGTATGGATTGTA GGTAGGAAACTTCTAATAGATGGAGTTAGATCTTAGAGAAGCATCTCCAA ACTATGATAGAGCTTTTTTGTGGAAAATAAATGTTATTGGTATTTTTTAA ATTAAATAATACATTATAAAACTAGCGTACAATGAGGCTGCTTTAGTGAT GGCTGTTGGAAACTAATTGGATTTAGGACTTGTAATCACACCTCAATTAA AACAAAATTAGCATTGACTTCACTCGATTTAAGAAGGATTATTTGCCATT TGTTGTGATATCTCCGCCAACCTGCGCTGATTGAAGTAACATCTCGTATT TTTTTCGGGCTTGCAAACGATAACGTAACATTTCTTGCCGTATAAGAACA CCACGTAGAATATACTATTACACACTACTATCAAACAATGCACAAATTCT TTATCCTCGATTTCCCGAAAATATCCGATCGGGTAACTGATGATGAATGT TAGTGTTGTAACCATGGTCGCATAGACAAGAGACATAGCATCGTTCATCG GTCCAGGTAGGCGGCGACCACGGAACGCTTGCGTTAGACAAACTAACTGA GCGATGATAAGGAAGCCTGTGATGACGTTTAGATGAAGTTGGACGTCTCC GTAAAAAGTTCTTGTCATGTTTTCTTTGTCTAGTATGATGCTTATCCTTG GCTTTCTGATAAAATTCAATATGTAGAAAACACTGTTGGTGACCAATAGA AATATGAAAACGGTGAATACTTGGACGACTATCGTTCTTCGTGCCTCGCC CCCTGTCAATTGTATGTTAGAAGTGAAAGCATCAATCAATTTCTGTGATT TTGTATACACGAAAGCGAGGTTGGCAGTGTAAAGAAGTGATAGATTCAGG AACTTTGCAACAGTTTTTGTTTTATCTATGTCGTCGTGAAGATAGACAAA ACAGCTGAATAGAATGGAAAGCAAGATGGTTCCGAGATGAAGAAACGAGA AGAAAACATCAGAAACTTTCACTGTCGGTGTTTGTCGGTGAATGATGAAA ATGACCAGCGTTGTCATGGTGATGAACACTCCAAGAGTTGTTAGTAGAAG TATTGTAATCTTTTGATGGTGATTGAATTTTAAATATATGTTTGTGAATG GATCTACGCATTCAGTTCTCAAGACGTTTGCGCTGCTTCGAATCCCAAAA CAAGTGGTACAAGCTTCATTCCCGAAGTTGTTCTTGATCTGGTTCTGAGG ACATAACTCGCATTTAAATCCAAGCTCTGATTGGATGAACTTGTCAGAAC TTTCGATCTCACCATAAACCCTTTGGAAGCCTGGTGAACAGTTTAGTTTA GCGAAAGGTAATGGGTTTCGGTATTTGCTCAAAAATATATCTGACGAATA AGTTTCAATAAAAGGCTCCCAATTAGGATCCTCATTCCCTTTATTCTTCT CAAGAATTTTATTAAAAGGTATCATGAAATCTTTAGTTTTTTTCTCTAAA AACACCATCATCATGGCGCCTTTGAGTGCTTGTATCTTATCGAAGCTTGT GATGACAGTTTTGTTTTGCACATGCTCGACAGCAATGCCAAGAAAAGATG CCAACAGAAGCACATGTCTAATTGCGAGTAACTCTGTCAATTCGAAGATG CTGTTCGCCACATCTTCCTGTAGATCTCGTCGCAACTTGTAGCGTTGGAA ATTCTCCAAGCTGAACCAATGATCATGTGTGTTGAAGTCNGTGATTGAAT TTTAAATATATGTTTGTGAATGGATCTACGCATTCAGTTCTCAAGACGTT TGCGCTGCTTCGAATCCCAAAACAAGTGGTACAAGCTTCATTCCCGAAGT TGTTCTTGATCTGGTTCTGAGGACATAACTCGCATTTAAATCCAAGCTCT GATTGGATGAACTTGTCAGAACTTTCGATCTCACCATAAACCCTTTGGAA GCCTGGTGAACAGTTTAGTTTAGCGAAAGGTAATGGGTTTCGGTATTTGC TCAAAAATATATCTGACGAATAAGTTTCAATAAAAGGCTCCCAATTAGGA TCCTCATTCCCTTTATTCTTCTCAAGAATTTTATTAAAAGGTATCATGAA ATCTTTAGTTTTTTTCTCTAAAAACACCATCATCATGGCGCCTTTGAGTG CTTGTATCTTATCGAAGCTTGTGATGACAGTTTTGTTTTGCACATGCTCG ACAGCAATGTCAAGAAAAGATGCCAACAGAAGCACATGTCTAATTGCGAG TAACTCTGTCAATTCAAAGATGCTGTTCGCCACATCTTCCTGTAGATCTC GTCGCAACTTGTAGCGTTGGAAATTCTCCAAGCTGAACCAATGATCATGT GTGTTGAAATTGTGAAAACTTGTTTGGTCATTTTCAAAAGATAACATGTC ATGAGCGATCAAGGACGTTTTGTTGGTTGTTTCTACATTAACGTCTAATA TCGCTAGAAATTCTTTTTGAAAAGGTCCAAATAGAATAATGGCTGACTCG CCCTTTCGCCAACGATTTAAGAGGTCTGATAGAATGTAGCCTTCAACATG AACTTTTTCCGCATTGATGACGATTTTCTGCAAATGAAATTCTTTTCTAC CAGCCAATTGGTCATAAGTACCATTGTAGTAATTGTTGAAGATCGGTTTC AATACATCATCGTGGACTAAAAGTAGGGTCAAATCTTTCCATTGTAATTT CTCTAATACATATATGAGATACCTGGTATAGTCATTTATCTTCAAATCGT CATCAGGGAATGCGACCGTCAAAAATGGTTCCCCAGTCATAAATTGCTTG AACATTTTGGCTGTTTTTGTACTATCAGCATAGAAGACTACAAAAGCCAA ATTGGGTATTCTGCATTCTCTGTTTTGGTCGCAAGCAATGTGGAATGTGT GGCCCAGAAGAATTTCCAAAGCTGCTTTCAAAGACTCTTCTGTGTTGTTG CATTTATAATGGAAACTATGGTATTTCAATTCGATGTAACGCATGTCTGT ATTGAGTCCAGTAATGTTTGCTCTTAAAAAACTGTCTGCCTCCTGTGTAT TATCTGAACAGTTTGGTAAGATAGCCACGACGTGATAAGTGAGTATGTGC TTGCTTAAAGCAATCTGTATTAAACTGGTAAAGAATAGAACGCCAAGAAC TTTACAATTCATTTTTATCATCTCTCTGAGCAACTACTACGTTTCTTCTG AATCAAAGATATGTTATATGTTGGGATACTTGTTAGTTTGGTCTCGATAT CTAATCAAATATTGATTTCACCTGCCCGAATAAAAACTTTCTGTTGTTAA ATTTTAATAGGTTCTTTTTTTTTCAGTCCAATTATCATATGCTTTTGTAG CTTGATTCGCACTTTGGTACTCAATATATTGATTAAAAAATACTATACAA GAAGAAGTTTCTCGTGGCTTAGATCACGAGAATTACGCAAACGTTTTGAG AATTTTTCTCCCATCATCGGTCATTCTGGAAGTTTTTCTCTCTAGTTTAC TTTTGCCACAATAAGCTTCCAATATGCATATCACTTGGTCGATAGACTCA AAATTACTTAAACTTATGGTACTTGTTATGGAAAAATTTGGGTCGTAATT GAGTCAATTGAAAGGTCATTCTCGTCTTCCTCTACAGTGTCACTTTCGAT TTATTTACCGCACAAAATTACCATATTAGGCCCCGACCAGTCCAAACAGA GTAAAATCGTTCCTTGTTCTAAACTTGGATAACATGCATTGGATTTTAAC CATATATTTCTCGCTTTGAGATATGAATAGAAGACCAGTACAGTATAATA ACTCCAGCATTCTTTTTCTTTCCCTGCTGATTACTACTCCATCCATTACT TTACAGGATGTTGGTATCTGCGTTCAGCGAAGATCAGTTGAACCGTTACG AAATGTACCGAAGAGCTTCCTTTCCAAAAGCTGCCATTAAAAGGGTGAGT GGCATATTGACCCAATATTAGAATTGTTAACTTGAAATATCAATGTGCAA AGGGATTAAATTTCTTGGGGGCCTTTCCATGATATATTAACGATTTTGTG TCTTTCTTTACCAGTAAACATTTTAAAAGTGGTATTTGTGCCTTTTTAAC TTTCTACTAAGAAACAATTTTTGTGGATAACACGCAAACGCCTCGAATTT ACGAGATAGAGCATTGGTATCAATTCTTTTTCCTTAGACAAAACATTTTT GTTTATTCGACCGATTAGACACACTTCCGGGTCAAAAGCACGAATAAAAA GCTTTTCAAAGACCGAAATTGGACCGAGTCTTTGTCAATCTTGATATAAT CCTTCTTCCCGTGTTTAATCGTTTATTACCCCCTTTTTTAGTTGATGCAG ACGATCACGGGCGGTGCGTCCGTTCCGCCCAATGTTGTCATAGCAATGGC TGGTATCGCCAAGGTATTTGTCGGGGAGGTCTCAGAAGAAGGTTAGTTAT TACATTCTCCATTAGACCATGAATATCCTTTCAGAAGAGATAGACATTAC AATAAGGTATACAAGGCGAGGTATATTTTCCATTTTTGGGAAGTGGAGAT TTTCGTTTTTGGTAACAAGTTCCGATAGAGCCGTTACATTTTATCCGATT TTTAGGCTTCAGAAATTCTAATTTCACTTTTCTTTAAATTTGAATTCTAA ATTCGCATTATCTAGTCAAACTTGTATACTTTTTGCCACACCAAGTATCA GATGGCGCAGTATTGTTATTGAACTGATGATTCTGGGAAGCGCTCGCACA CCCATGGCTGAAAAGTAGGGAACGTTGGTGAAAATGCGCAACCAACTTTC TAGTACCCTAAAAACCAGAACCCTTTGATTTGTTCGAAAAAAGTCTTATA TTGATTTTCGTATTTTATTAGCTTTAGACGTAATGGAGAGTTGGGGCGAG ACTGGACCCATTGAACCGAAACATTTGAGAGAAGCAGCAANAACATTTTA AAAGTGGTATTTGTGCCTTTTTAACTTTCTACTAAGAAACAATTTTTGTG GATAACACGCAAACGCCTCGAATTTACGAGATAGAGCATTGGTATCAATT CTTTTTCCTTAGACAAAACATTTTTGTTTATTCGACCGATTAGACACACT TCCGGGTCAAAAGCACGAATAAAAAGCTTTTCAAAGACCGAAATTGGACC GAGTCTTTGTCAATCTTGATATAATCCTTCTTCCCGTGTTTAATCGTTTA TTACCCCCTTTTTTAGTTGATGCAGACGATCACGGGCGGTGCGTCCGTTC CGCCCAATGTTGTCATAGCAATGGCTGGTATCGCCAAGGTATTTGTCGGG GAGGTCTCAGAAGAAGGTTAGTTATTACATTCTCCATTAGACCATGAATA TCCTTTCAGAAGAGATAGACATTACAATAAGGTATACAAGGCGAGGTATA TTTTCCATTTTTGGGAAGTGGAGATTTTCGTTTTTGGTAACAAGTTCCGA TAGAGCCGTTACATTTTATCCGATTTTTAGGCTTCAGAAATTCTAATTTC ACTTTTCTTTAAATTTGAATTCTAAATTCGCATTATCTAGTCAAACTTGT ATACTTTTTGCCACACCAAGTATCAGATGGCGCAGTATTGTTATTGAACT GATGATTCTGGGAAGCGCTCGCACACCCATGGCTGAAAAGTAGGGAACGT TGGTGAAAATGCGCAACCAACTTTCTAGTACCCTAAAAACCAGAACCCTT TGATTTGTTCGAAAAAAGTCTTATATTGATTTTCGTATTTTATTAGCTTT AGACGTAATGGAGAGTTGGGGCGAGACTGGACCCATTGAACCGAAACATT TGAGAGAAGCAGCAAGAAGATTGAAACAAAAACAATTGCTTCAAGCCACA CGATACAAAGGAACTGTCAAATTTTGAGTTCATTATTCGTCTGTTTCTTT CGAAAAGGATAGAGAAACTTGGCCCCTTGGCGTGGTTATTTCTCTGGTTG AAGGAAAGGGTGTCTGAAGGAAAAGGGGCATTTCCGATTTGAAGATTATG GAAGAAGAATTATGGCCAGGAGATTTCACTTACCCAAATTACTCAACAGA TTAACTTCTTGGAAATCCTGTTGTCAATCAATTTAATTCTTTAAGTTGAG CGAACGACTTATATCTAACTATTCAATGGTTTGGGACTAGTCGAGAGATG AAGTCTTTTGCTCTATTTCATTGAAACATAGAATGAAAATGAAGTTAAAA TCAATATTTTTGATGAGTACTCACAAAGTCATATATTTACATACCTTCCA ACGGTAATACGGATCATCGACACGATGCGACTCAAAGACTTCAATATGAA GCGCCAAAACTTTAAATACTACAATGGTCTACGGTTACGTGATAAAAATA TACAATTTTCTGGATAAAAGTATTAAATTGATATGATATAATATGGTATA AGATGTAGAATATATATGTTATGATCATGAAGTTACTCTATGAAATATTT TTTAAATCTATTCGCTTTAAAAGTGTGAAATAATTCTTGTTTTGCCTGCC ATCTTTCAACCAATGCTTTGATTCTAACAAATTACATAACGTTGAAAAGA TAATTCAGAGCACTATAATCTTTGCAAAATGAAGATGAAAAATGAATTTT TTATCCTTTAATGCTAGAAACTTAATAGTTGTGGTATGGAGTTACTTTGA AGCCCCCTGTAGTCAGTCATATAATTATTTTACATGAAAAGCTATTGTAT CTAGAAGTCAGAGCCTATAGAAGGTAGCTCGTAGGAGCCGAAAAACCCTG AACAATTTATGAAAATATGTTCAGATCGAGGAACGCAGGGAGTCATCCAT ATAGTACGTACGCAAAATTTTTCAAAATATTGGATACCCCCTCCCTCCCC TTGTACGAACCGAAACATTTGAGAGAAGCAGCACGAAGATTGAAACAAAA ACAATTGCTTCAAGCCACACGATACAAAGGAACTGTCAAATTTTGAGTTC ATTATTCGTCTGTTTCTTTCGAAAAGGATAGAGAAACTTGGCCCCTTGGC GTGGTTATTTCTCTGGTTGAAGGAAAGGGTGTCTGAAGGAAAAGGGGCAT TTCCGATTTGAAGATTATAGAAGAAGAATTATGGCCAGGAGATTTCACTT ACCCAAATTACTCAACAGATTAACTTCTTGGAAATCCTGTTGTCAATCAA TTTAATTCTTTAAGTTGAGCGAGCGACTTATATCTAACTATTCAATGGTT TAGGACTAGTCGAGAGATGAAGTCTTTTGCTCTATTTCATTGAAACATAG AATGAAAATGAAGTTAAAATCAATATTTTTGATGAGTATTTACAAAGTCA TATATTTACATACCTTCCAACGGTAATACAGATCATCGACACGATGCGAC TCAAAGACTTCAATATGAAGCGCCAAAACTTTAAATACTACAATGGTCTA CGGTTACGTGATAAAAATGTACAATTTTCCTGATAAAAGTATAAAATTGA TATGATATAATATGGTATGAGATGTAGAATATATATGTTATGATCATGAA GCTACTCTATGAAATATTTTTTAAATCTATTCGCTTTAAAAGTGTGAAAT AATTCTTGTTTTGCTTGCCATCTTTCAACCAATGCTTTGATTCTAACAAA TTATATAACGTTGAAAAGATAATTCAGAGTACTTTAATCTTGGAGATACT TTGAAGCATCTTTTTGTCAGTATATAATTATTTTACACGAAAAGCTATTG TATCAGAAGTCATGACCTCTAGAAGGTAGCTCGTGGGAGGTGAAAAACCC TGCTTTTCACTTCAGAGGAGTACTTTCTTAAGGCTGCATAAATGGACTTT AACAATTTATGAAAATATTTTCGGATCGAGGAACGCAGGAAAAATCACCC TGACATTTTTGGTGGATTCATTGTAAAGAACTGTAGTCTATTGAAAAATA GTTACTTTTCGCTGTGAATTCACCCTAAATATCCACTTTTTTGTTTTCAC ATGTGGGAATGCCGAGGGAAGGCTATTACGAAAAGAAAGAGTGTTTGATA CGTTGTTGATCGTACATTTCAGTGATTTCTCGCTTCAGCTTCGTTCTTCG ATTCTGATACCACGTTTTCAATTGGTTGTCTGTCATTTTCAATTCTCGTG ACATACGCATGCGCTCTGATGACGATAGATATCGACTTTGTTCAAATAGT TTTTCCAATTGAACAACTTGATAGGGTGTAAATGTATGGCGAAACGCCCT TCGTTTGGGTGACGCTCTGCTGGTGTAAGGGTGGCCTAATCTCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070559TCONS_00070559Clytia hemisphaericatranscript
TCONS_00070558TCONS_00070558Clytia hemisphaericatranscript
TCONS_00070557TCONS_00070557Clytia hemisphaericatranscript
TCONS_00070556TCONS_00070556Clytia hemisphaericatranscript
TCONS_00070555TCONS_00070555Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070555-proteinTCONS_00070555-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:785505..794099 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
66.58 68.43 43.32 38.78 26.34 20.72 27.67 30.28 20.36 18.05 18.94 14.67 12.01 12.18 12.69 13.71 22.68 19.55 11.66 10.09 18.97 15.28 49.11 40.87 21.12 19.7 11.72 8.22 16.7 22.62