XLOC_043914 (gene) - C. hemisphaerica

Overview


Name	XLOC_043914
Unique Name	XLOC_043914
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_56:866423..878114-

gene from alignment at scaffold_56:866423..878114-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_043914 ID=XLOC_043914|Name=XLOC_043914|organism=Clytia hemisphaerica|type=gene|length=11692bp|location=Sequence derived from alignment at scaffold_56:866423..878114- (Clytia hemisphaerica)
TGTTTTTAGGTTAACTTTGGATACTTGGAGCATGGAGAAAAGAAGAACGC
TTTGGTGAAACTTCGTGAGTGACCGACGGTAGAATTTTCTTATAGTTGGA
GTTCATTCTTTTATATTTGATTTACATTCTCACTAAGTTATTTGATATTC
TTTTTACTTAGGTTTATGTCCTGATTGCTCTTACAAGCTGAACTATCACA
AGAAGTAAGTCATTTTGAATTTTTTCCCCTTATATACTATTATGGGTAAG
TAAATATAGGTTACGTATTTTTTAATAAATCTTAAGTCGATTGTCAACTT
GATAAGCCAGAGTCCGACCAAAATCACGTGAAAGGTTTAAAGTTTACGGT
GGCCGTGAGAGGACAGCGCGTTTTTTTTTCAATAGCGCGTTTTTTTTTCA
ACAGCGCGTTTTTCTTTCCCATGTTTTTTTGCTCTCATTATTTAGGTTTT
GAGTGCAGCATAAAGTAGGAAGGCTTTAAACATACAAAATGGTTTATTGT
ACTGAATGTGGACGGGTGTTAGATGACGATGGGGCAGTATTTTGTTCTCA
TTGTGGAAGCAAAACCTATTGTCGTCAGAGGAGATTAAGGCAAGACGTAA
CTGATGAACGTGAAATAATCGAGCATTATTTTAAAGAGGGCTTGTTGAAA
TATAAGCAAATCGTCCCCATGTTGAGGATTTACCATGGTATTGATATGAG
TGAAAGGACGCATTGAAACGTCGTTTAAAGACTTATAATCTATCACGAAG
TTTTACAGATATCACAATACCTGCTTTATCTGCTTTAATTTTACGTGAAA
TGGAAGGACCTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGTGGTTCGTCTTTTCGAGATTTTTACAAAATCAACTTGAT
GATGTAAAACATGAATGGAACTCTCATTATATAAGAAAGTCACGACATGA
TACCATAGGAGGCATTCCGGATGTACTATTTTACGCTCCAGAGTCAGTCG
ATTTCGAAGACCGAAAAGTAAACCTAGACGATAATTTGATAGCTAACCTT
TTAAACGAAAGAAACATTCCCCAAGAAGCGACCTTAGCGGTTGAGGCTAA
CACAGGTGAAGAGTTAAATGACTTTTTTCAATATGTTATAGAATCAGAAA
AATTTTATATTTGCACCAAACAACTGGGCAGCGGCAAGAGAGTTATTTTT
GCAAATTATCAACAGATGTGTCTGATGACCTTTGAAATAAGTTTTATCTA
TGATACACAAGATTTATTATTTCTTTATTAAGTTTAAATATATCATAAAT
TTTCGAACTGAGTTACATGAACAGCTAGTGAAATTCGAAACCCCCGAAAC
TCCCGTCTTCGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNCTGTTGAAAAAAAAACGCGCTATTGAA
AAAAAAACGCGCTGTTGAAAAAAAAACGCGCTGTTGAAAAAAAAAACGCG
CTGTTGAAAAAAAAAACGCGCTGTTGAAAAAAAAACGCGCTGTTGAAAAA
AAAAGCGCTGTCCTCTCTCGGCCACCGTAAAAGTTTAATCCTGAAATGCT
CTTTTTTCATTAAGACACAAGAAAGCGAAGAAGAAGAAATCGAAAAAGAA
GAAAATCAAAGAACGTCGACGAGAGAAGAAAGAACGAAAGAAATCAAGCA
AAAAGAAAAAGAAGAGGAAGAATTCTACGTCATCCATTGAAAGTGAAAGC
GATGAGTCAGCAAGTTCTGGTGACGAAGAACAACCTAGTGAGTGGAAAAC
CTTAATGATAATGTTTTAATTTGTAATGTTGAACAGGCTGGTTCCTTAAG
AAGTTCAGCAGAAAAAAGTTACCCTCGTGTAGACCAGATGTTGTGCGTCT
ATATCCCCTACTATAACCAATTCATTCACTTAAATCTCTGTTATCAGAGT
CAAATTATTATAAGATATGTCTTCTCTTCGTTTACTGCCACTTTTGTATG
AACAAATAATATTTGCAATTTTTCAACTGTAACTGGATTGTATTGTAATG
CCTTTGCAAATGTAAAGGAGCTCCCTGAAGCTCTTGGGCGGTATTTTGTC
TTATTGCACAAACACTTTTCAAAAGCAATGCGAAAAAAAAAAAGTTACAA
ATAGCGTTCCCTTTTGCAGAAAATTCGTCGACTTCAAAAGAAAAGGATGA
AGATGAAGAAGAAGATGCTTCGAATATTTGGAAGAAACCTGTCAAAGAAG
ATGTCGAAAAAACAAGGTCAAATTTCATTTTTACAACCTTATTTTACTGT
TATTGACAAATTTGACCCAGGAGCATAGTCAGAGGGCTTGTGTAGGGAAA
TTCTATAAGATTTAGTAAAATATTTTTCGTATTTTCATTATATAAAGATG
GTAAATAATATTGTCTTCTCTCTGCTATACCTGACAATCTCTATAACTAA
CTGGAAGGAATTGATTTCAAAATCCGCCCTCTAAATCACTCTTCTATGTT
GCCCCTTTGTATTGTGACAATACTATTTTGGTACCTTATCAACTTAGTAG
TGAATGATACATTTACTAAAGCTCTTGGAAAGTACATTATCATTAATAGT
GACCGTAGTGAAAAAGTAGAGCATTCGGTTACGGTGTGCAAATTTGTGGG
CTCAATCCCAAGACGGATCATACCAAAAGACTTCGTACAAAATTGTACTT
AGTGCTTCTCTGCTTGGTGCTCAGCAAGTAAGACAAGGATCAAGGATAAG
TGGAGTAATAGAGGGACATAGCATGGCGCCCTCCCTTGCCTTCGGGTTTA
ATAGCTATCGAAAGAGGAGCTTTTGGGTCGCCTCTGACTGCGGTCGCAAG
ATTTACTGTACTTATTTTGAACATATTGTAACCAAATCTTNGGTCGCCTC
CGACTGCGGTCGCAAGATTTACTGTACTTATTTTGAAGATACTGTAACCA
AATCTATTTCTCTCATAGGGAGGAAGAATTTGATGAATACTTGGACGATC
TCTTTATGTAAAACAAGTTAGAAAAAAGTTCTTGGACAAGGCTAAATTTA
TACGCGGATGAAGGCTAATGGAATGATATAAATCAATCGTGTAGATACCC
AAGCTTCAGGAGGTTTAGTTATGCACGAAGCTGTATGTGACGTCCAATTC
TCTGGTAAGTCAAGTAAGATGCAACAAATATGTGAAAGAACAGTCAAGCC
CAAAGACTTAGATTTCTGGGTAAGAGAAACCCTAATACTGAAGTAAATTG
TACTGCAAATTCTTTACTGTAACTGCCCAAAGTTACTAAGTGAAAGACGA
AGACACCTTTTACGATGATTGGGAGATGACTTGATGAATGATTGAAAGTT
TGCCCGACTTATCTAAAATCCAGGTGGTCGTATGAATTGAACGGCTATAT
AAATACTTGTCAACACTAAAAATCTTAAAAAAGAATACTTGTTTTAGTAA
TAAAACTTTTTTTGTAATAGTTGGTTAATGTAATATTTCAATTCGATGAT
TTTAAACCAAAAACTTATTATTGGAGATGATATCTTATGCTATGAGAATT
CAAAAGATTTCAAAAACAATATTGAATGATTTTAAAACTTTTGTTTTGAT
AATACTATCACTTATGTTCTAACGGTGACATGATAGAGAAGGTTTGTATT
GGTTTTTTATGATTGGCCTTGCGTTACATTCTTTATGAATTCTTCATTTC
TTTTTGTTAAAAACTAAAGTCGAAGTATGATTTTTCTTTGAATATTCAAT
ACGTTGGACTCTTTTATTACTCGAATCTTTCTATTATTCGAATTCGGTAA
CCCTAGTAGAATACTCTCTATAGTCCGAATCTCTCTGTTTAGTCGAACAG
ATTGGACACCCTTTTCGAGTTCGAATCAACGAAACTTTACTGAAGTCTTC
TGACATCATTCGATAAACTCATATTACTTGCATTGCTCTCTTTTGATTAT
GGGAAATCTTAACTGTGCCTCGAAATCAAGTCTGGGAGGTATAAATGACC
ACTAACACAATTCTCCTGATGTGCTCTTAATCCTTAAAAAGGAAGATAAT
TTCTCATAATTAAACTTCCGCACAAGTACAGTGCATGAACTAATTAGTAA
TTGGTCAATTAAACGTGCAGTAGTTTTCAACCGTCACACAAAATTATTTT
GAATTAATTAATGTGATGTTGACATTGGATTTGTAATTTTGACTTTTCTT
GATGTGAACATTTTTGATGTGTTTATGATGCTCAGAAGAAGCCAGACGTC
TTACTTCTGCTGTTCAATTTTCTTTGTGGTGGCACTCGTCAATTGTGGCA
GTTATAGTAAGTTTTCTGTTTTCTTTGTTATTTTTACATTATTTCGCAAA
TTTGAAAATGGGCTTTTCCAGAAAAAAATTGAATATGGGGGGTGGAGGAT
ATAACAATTTTCAGTGATTTACCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
CCCCCCCCGGACAATATATCCTCCACCCTCATGTACGGACATTTTCTGGA
AGAAGATTATTGTATTTGATTGAACGATAAAATATTGGTAATTCTTTTAA
TTTATTTCAGATTTTTTTAACGTCAATCTCAATGTGGCTTCAGGATCCAC
GGTCTATCTGTCTTGCAAGGACCTTATCACCGATAACATCACACAATATC
ACTTCCAGTGGCTTAAAGATGGTATTGATGTTAGAGAGAAAAATTTTAGG
TAACAATTTCTCTTGAGATTAACTGCAGCATGCAGTACAACAAGGACTTC
AAACAGAAATCAATGGAAAAATATAAATTTGAATTGTCAGGGGGCTATTA
AAATTTATTGTATGGGTAGACTCAGGCTGGGGAAAGCCTTAAATTTTAGA
TCAAAGTTTTAAAAACCCTTTTTACGAAGTGATTTGTTTCTACTCTCTAT
TCTGTATTTGTTTGTTTTCAGATTCTTTTACCAAAGCCTGACGCTTGTGA
ATACTTTAACTTTCAAAGACATCAGGTTTGATGACGCAGGCTTATACGAA
TGCATCGTTACCAATTTAGTTGGAAATCAGACAAATTTGCAGAGGGTTTT
TGAGATCAACGTCCAAGGTATTGTTATTTACCTCAAATTACCTTTTTTGA
GGTAAAAAATACTCTAATAGTCTACAACTGAAATTAAATTTCAACCAGGG
AGGGGGGAGTCATGCAGTTACTACAAGATATCATGAGTAGTAAGTGTCTT
TTTGATGCTAACAATCTCATACCACCACCCTTTACCTCTAGGTAGTAACT
GTTTTCTTGACAAAAAAATGAATAACCACCCCAAAATTTCCCCATTTTAA
AGTTACTTTCTGGAATCTGGCAGAACAGTGTAGTGCAGGGGCTTATGTAT
TCTCGTGTGCACAGGTTTGTTACAAGCAAACTAACTTTTGATCTGATGCC
CTGACCCCTCAAGGACCAAGAAAATTTTGGGTTAAAGAATTCTAACACCC
CTGCTGCCACTGGTTGCCATGGAAAATGATGTCATTGGTTACCATAGCAA
CAAAAAATTAAAGTCGTCAAATTCAAAAAAAATTTTGTTCCATTCGAAAG
AGCATGAAAAACTGGTAAAGAAAAAGGTCACAACCTATATCTGGAAATGC
ATATATCTCAAGATATTAAGGAAATAAGGCATAACGACGTCATAAATGAT
GACGTCATCGAAAAATAAAAAATTGTCAAAATTCAAAAAAAATTTGGCTC
ATTCGAGAGAAAAACTTCCAGGGAACAAAAAATATTACTACGAAAAAGTT
TCAAAATCATTTAAAGAAAGTATATTGATAAAAAATTGATATTTTTTTAT
TTTTGCCTGTGGAAGGTTGGAGCTTGGGGCTAGGCACGCTCAGCCCGGCA
GATTACAGGCAAAACTTAAAAATACCAATAGCCTCTTTTAAAATGATTTT
TACCTTTACTTCCTAGTTATCTTCTTTCATTTTGAGCTTGATTTAAATAG
AGCCTAAAACTGCATTCGATTTTAGTGTTGAAACATTTCGAATGCTTTGA
AAATATTTGATTTCAAAATCCAAAAAGAGAAGTGTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTTCTTCAGACTTGAATTTGGTACCA
CCCTCAACTACAGTTACTACCTTTGGGTAGTAACTGTTTTTCAAATTTTG
AAAATTTAGACCACCACGGTAGTAATTGTGATAGTGTCGGATAGTAACTG
CATGACCCCCCCCTCTGTTTCAACTGAAATTATGTAAACATGAAAGTACA
ATCTCAATCCAATTACTAACTTCAGTTCATTTATTTTCTTTCTAGAAAAA
GATGAAAAGTTGAGATTTTCGCATGCATTGAACGGTTCGAGTTTGGTCAT
ACAAAGAGAACTTGGTCAAAGTGTATCGTTCAATTGTCACGTGGCTGGAG
CTGCTGGTATTTCTATACTTATTTTTTTTTCTTTTGTTGATTTGTTTGTG
AACCTTGCAACGAGTTTCCATTTAAGATTTGTTGCATGGAATATTCCTCC
AATGTATGGCTTTATCTAGCCATAGGTATTATCAGGCTTGAGAAAGAGAA
CCCAATTCAAAGTAAAGGTCCCTTATTTAGCTTTAAACAGCCTGTTTTTA
GCCTATATTTACCTTATATTTGGGTTTTCAGAAGTGAAATTTCCAACCCC
CTCGGCAATTAGGTCCCCCCGTTTATTTGGAACCTAAGAGTACTAACCTA
GAAGTACTAAACTAAAAATCTATAATGGTGGAAGCCATGTCAGATCTAAG
ATCGGTGTGCGTCGCAGTTAACATTTTTTCAAGCTCATTCAATCATGTTT
TCCTCACTAGATCTGGCAAGACACTACCAATGGAGTTACCTCGACACCAA
TAAGACTTTAGACAACATAACATTATTGAAGAGAGGCTCAGAGATGAATG
TATTATCACTAAATGACTTGGAAATTGATCAAGGTGGAACTTATTCTTGT
GTTGTTTCAAATCTCAATGGCTTCATTCGAAGGGAATACACTCTACAAAT
TATAGGTAAGATTCACTCACATGTTTGAATTAGAGTCTTTCTTTCAGGGA
TCTTGGTCTCCTCAAAGACGTCTTTTGAGATGAATTTTTTCTTGGAGCTT
GGAAAAAAAAAGACTTTTCACTGTGCAGAACGGGTTGAACTCATTTGGTC
TTGAAAGCTTATATATGTCATTTCTATAATTACAATTTTCAGAGCTGTTA
ACGCTGAAAATAATAAGATTGATGATTGTCTTTCATAGGGACGGTATGAA
ACTTTAAGTTCAAAAAACTACACGAGTCTCATTCTTAATGTTTTCAACCC
ATGTTCTTTTAATCTTTTAATTTAATTTCTCCATTTTCTAACAGATGGAA
GTGAATCACGGAGAAAGGCGAAGGAAGAGCGTAAACGTAAACACCGAAAT
GAAATCATCATCATATGTTTGTCATGTGTGGCTGCTCTTTCCCTCATTAC
AATCGTCGCTATCTTTCTCTCCAAATGCTTCAAATCTCATTGGTGGAAAT
GGAAAACTCGAAGAAATCGCGCCCACTCTTATCATTACCACGCTTCTACC
TCTGAACCGCCCCAAACGCCTAATGGAAATGTCTTCAAGCAAATCACGCC
CTGGTGATGATACGTTTATCCAATCAAAAATGGAATAGGAGAACAACACT
TGCGTTATTCTTTAGGAGAAATTGGGTCATTTTAGAGATCTTTCTGGATA
GATCTAGTGAAAAAGAACCGAAAAAAGAACCGGCCGGTTTTTAAACAACT
GTACCACTGTACACTTATACGGGTGAACTTATTGGCTTGTGAAGAGCGAG
AAATTTGTGACAGAAGTTATTGCAAAATATTGCTGCTTATTTGATTTGAC
AGGAGTGAAAAATGAGACTCCTATTTAGAAATGGCTCTAAACTAAAAATT
TACAAATTTAAATTTTATGCTATTGTATGACAATAAGATATTTTATTTTA
AGTTTAAAAAATATTCAAGTCGAACATTAGTTCTTGTAAAAGCAGGAGAA
TAATTACCAAGCAATTTTATCGCGAAATTCAGCTATCAAACTCTATACCA
TGTAGAAAATATTTTTTCAAGAAAATGATTTTTGAAAAGCTGAAAGTCTT
TATCTATATATATACGATATCTACGAGTCTTCATTTTACCAAAGTCTGGT
AAGAACAGTGTTCTTTTGAAATTTTCTCTTCGAATGCTCTTCTCCACTTG
GTATGTAGGTTTTATGTTCGAAAGACATATTTCTGTTCACCGAAAACGTT
ATATTTCGCCGAAAAGACAGTCTGATAATTATAAATCAAATGTTTCTGCT
CTTCTTCTTTGCTTTCAAATTTATTAAAATTCTTCTTCGCTTCATTAACG
AAGAAATTAGCCATGTGTTGCGCCAATAGGACTGCATTCGAAGTGTGAGG
TATATTAGGTCCCAGACCCTCTGCGTTGTCGAATTCAAAACTGTTCATTT
CTGGATGCCATTGAACGGCGTAGATTGGAAAATCATTCGCTG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00070570	TCONS_00070570	Clytia hemisphaerica	transcript
TCONS_00070569	TCONS_00070569	Clytia hemisphaerica	transcript
TCONS_00070568	TCONS_00070568	Clytia hemisphaerica	transcript
TCONS_00070567	TCONS_00070567	Clytia hemisphaerica	transcript
TCONS_00070566	TCONS_00070566	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00070568-protein	TCONS_00070568-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_56	supercontig	scaffold_56:866423..878114 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.63	42.93	44.49	42.78	21.91	17.24	41.68	38.22	32.27	26.59	21.11	23.32	22.32	21	20.58	20.35	31.02	30.23	22.68	28.14	20.61	18.93	28.47	29.01	14.71	16.07	17	12.45	20.16	22.32

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XLOC_043914 (gene) - C. hemisphaerica