XLOC_043937 (gene) - C. hemisphaerica

Overview
NameXLOC_043937
Unique NameXLOC_043937
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:43997..53188+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043937 ID=XLOC_043937|Name=XLOC_043937|organism=Clytia hemisphaerica|type=gene|length=9192bp|location=Sequence derived from alignment at scaffold_57:43997..53188+ (Clytia hemisphaerica)
aaaaatgagacaaattgaaaaataaaatttcatattgCTGCTGTTGAGGC Caaaggtccaatctcaaaataagtgtctgagaaaactaattttctaaaat tcaaaGATGTGTCCTTTTCTCTGACAAGAAAAGGGCTAATGTAACAATTT TAAGTTAGAAAAGCAAactagtttcaattttctcaGACACTAactttgag attgaaccttttcCCTTGACGGCACCGATATTGATAATGTTAATGGAACT TGGAAGAACAAAAACTGTGGGTCTCTGTGGGAAAGGATCAATGAAGGTAG TACTTTGAAATTAACAACAGCTTGGCTTAATCTGAATTTTCATGCCTATA AATAAAGACAGATAAAGACAGTGAAAAATAGTGAGAAATCAGGGATATGt aatagcggagctggatgaaggactagaattccttagcggattgcttcttt gtcttttctattgtaaactgttgataatagaaatccatctctgtcccctt gagtgttctgtttttataagaaacatgaagcagacaaagtattcatgcag tacgtttgcacatattttgctatgatgttcccgcttttcgtTAAAATgat atttgtagaagatacacaaagcttccttgtaaatgaaatctatttttatc agcggGTGggatgaatttgagaagctttcatgatttatctttaaaaattt cggatgtaaatattttgacaaatattgtttcaattgacttgaaatttttt ccataatcagacataccgaattgctatctgaaaatatcagttagaaagtg aggcaccccgccaCGCACcccgataaatgcagcagcagaatcattagcta agaggaaatccaaatttcacgagtttgtaattaaaaaagttaaatttcac atcaaattttaatgtcagggacagagatagaacaaggcttttttaaatgt gcgttatccagctccgctataacatatccctggagaaattaaaaataaaa catttaatGCCATTACTCAGAAGTTTCAAATtctcaaataattttttatt ttaagtttgtGGAAAGGGGTTTGATCTGGCCCTTCTAGGCATCCCCCAAC CTTAAAAAATGCCGACCCCCAAGCTTTTTAGActaaattttcaaatcttt cttgGTCTATGCAAAAAGGGAGAAGAGAAAACAGCTTTAGCTTGACTCGA GCTTAAGTGTTTGCTTGCAGCATTGggcacaaagtccaaatatgcgtttt cTGTAGATTATGTATGAAGAGTTAGAGCTACACTGCTGGTAcaggaatga aaaaaataatgaatcaGGACATGATTATACCAATGGCACTTGATAGGTTA ATAGGGCTGGATTTGAATTTGTTGCTAGTAGATCTTCTATTTTTCTTAGT TGATGAGAATACTCACTAACCCCTTCATTAAAATGCTTTTCTAAAAAGAG AAGTTTTGTCAGCAAGATGCAAATGGATTTGTTCGTTTTAGCTGAAAGAA TTCTTTATGtacttttaaaatattgctTGGACTCGGAGATTCATGTATTA CTCTCAGAGATTTAAATGATAATTCAATTAATTGGAATCATAACCAACAT GTGGATAAATCCATTGCCTGACCCTTTTTTGCATTCTTATTATCCAGGAT TGTTTCCACTGCCCTCCATGGTTTTTGAGCTTTGCACAAATTTTCTCTAC TCTAAAAGAAACTCACAGGAAGGAGATTTTAAGTTGATGGCTTTCATTAT TTTTATAGATACAAAATGTACCGGCAAATTGACTGAGAAATGGTTTTCAA TATTGAGAATATAATAttcaaagaagattttgatGTAAATCTCTATTGCT CATTGAAATTCGCATTCGGTATCAAAATAGAAGAAAAGTTAATTGGTAAT TGTAATATTTGCATTGATAATTTGTTTGATGTCCTCAAGCTTCAAGATGA AAAAGGTAACCATTTTTCATTTGATCCCTCAGATGGGGAGGTGTTACGCG CCGATACTTCTACAGCTACAATTGATGATCAGTTGGAGTTGATTGAAAAA GAATCAGAAAGTATTATTGTTTTGGAGGAAAACTTGACAACTAAACAGGT AACCGGTGAAACCAATGAAAACCAAAACCataatgatttcaatgaacccC ATACTGATTTCAATAGAATCCAACCATTTAATGACAACTCCTTGATAAAT TGTACAGAAAAAGGAAACACCAACAAACTAGCTCAGGGTATCATTGAGGA TGACGAAGAATCAGATTCcacttttgatgaaaatatcaatattACTAAAA CAATTAATGACATTCAAGAATCTGTTACATTTGAAGATGAAACTATTGAT TCAGTCGAATTAAAAGTTGAGGAAGATATAGATATTGTTGAAGAAAAGAA TACCACCCAAGTTTCATATGTGGATGAGAGTCTATTAACTGGGATTGATA ATGCAGGCATTGCAGCGGTAAAGAACGAAGATAATACTTCTCATGAATGT ACAGTAAATCTTTCCATGTATCCTCTGCCAGAGGACACCACTTCAAATCA GGAttcagaaaaacaaacaaactttgaTGATCATTGTGAAAATAATCAAG TAATAACTTTTGTTGGCAATCCGCCTAGTAGAAATGTGAATTCTGATATA GAATGTGACACAAACATGACTCAAGTGTCATCTGAAAGATTGAATCaaag tttttccaattttcaatgcaaggaatgtggtaaatttctttcttcaaagG GTTCGTTGAAAAGGCACATTCATTGTATGCATAAAGAAATAAAGTTGTTT GAATGCAAGGAATGTGACTGTTACTTTATGCAAAAGATTGACCTTCTTCT TCATATCAATAGTTTTCATGAAAAGATCATCCAATACAAATGCAAGGATT GTGgaaaagtttttcttaaaaaacatcatCTGCAAAGACATGAAGAAATT CATATTGGTATAAAACCTTTTGAGTGTCAAGTTTGTGGTAAGTCGTTCAT GTTCAAATATCACCTCACTCAGCATCAAATGATACACGCTGGTATCAAAC CTCATAAATGTAAAGTTTGCGAGAAAAGTTTTATCCTTAAAGCGAGCCTT TATCGTCATGAGCAGATCCATAGTGGGAAGAAACCTTTCAAGTGTAAGGA ATGTGGTAAAAGTTTTTCACAAAATAGTTACCTCCTTGAACATCAAAATG TACACAGTAATGTCAAATACCAATGTGATCAATGTGACAAATGTTTTTCT AGGAAAAGTTATCTATCTAGACATAAGAAAATCCATGGTGGAGCTGGTAG CTAATAAAAGATAATTTAGAACCACATTAGGTGATACATCAAGGATAGAT GTTAATTGTTTCAGCTGAAaagcattttctcaaaaacaagAATGTTGCAA GtccaaaaattattaaaaacctTGACTCGACTTATTTTAAACTTACAAAA GTGGACTTAGGACACTTTCATCTTAAAGATTGTTTTTCGTTATTACTGTT ATTGTTTTCATTGTACATATTTATGGATGATTCAGATGACATTGCATGTT GTGTTTTTTGTAGATTTAGCCTGGAAGAATGGTAAAGAAAATCTGTTGAa agattcaaagaaaaattcaaaaaaagagtTTGACAGGTCCAGATTTATCA GATTGTCTGCTCTTTAATTCTGCAAAATAGGGTGGGCTAGtacaaaaata caatatttcACATTGCaatttaatttgaaatatctTCTCAAAAAAACATC TTAAAAGTGCATTACTTAAAGTCTCATGTTTACCCAATCGTCAAATCTAC CTTATGATTTTGACAATTATGATAGAGCTCTGAATTTTGTGCAGACACTT GCAGTAGAATTTGAAGTTTGTGAATATAGGGTAAAGAACCAAACATCCCA TCATgtacttttttggaaaaaatggcagccTGTAAGATGAAGTCATTGGT CATTGATTATCATGGcaacaaatattattttaaaactgtttgatcatcca tttttgatttcattatattaattattttcacctttctTTTTTAGAGTAGC tacaaattgacaaaaaagggaacAATGAATTTCGTAATCCAAAACTTACA ATTGAGGAAGGATCCAAAAATAATTGAAGAGACTTTCTTTGGAATAGAGT TTTCATTTGATATTAATTTGGATGACAACATCATTGGTCATTGCAATGTG TTGatgaaaaattcaattcaacATATGAAAATTACTGATCATGTTGGTAA TATCTTTACGTTTAAACCAAGGAAACAGAGCTTTGTAGAGATTGAGGATA tgggaaagaatttttcaaaattaagtcaATGTCATATTGAAAAGAACTCT CAAAAATCTTCTTTAGACAATAAGGATGATGTTCTTACTCAACATGATTC GAATAGAGCTGCAAATAATTTGACTAATGAGGACATGTTAGTTGAGGATA ATGATTTAGAAGTTTTTTCACCGGTCACTGAAAATGATAATAGTTTACCA AACAATAATGATGTGTCGCCAGAAACTGTTGATTCTTCTTCAGGGAAAAA TTCTCAGAAAAGTCTTACTGAAATCAATTTCAATGGAGAGGAGCAAAAGT TAAACAACACAGAAGGAAATTTGGAAACGCATTACAGAAAGATGGGTTAC ATCCAAGACAAAGAACCTAGAAATTTGACTTCTGAAAATGAAGTGAATAT TTGTAACTCAACTGAAATAACTACCagccaaaataatcaaaatttcacAA AGGAGCAGCAATCAGCAACTGAAAGTGAATCTATTGATAGATCCAGGGGC AACAATTTTCAATCTGTTGGAAATAACATCAGCAGAGAAAAAAGTCCCAC tgaaatcaaaattgaagatttttttgatgAGCATTCAGAGGAAGAACAAT ATACAGCTTATGTTGTTAATTCAACACCATCCAAAAATCCTAGTAGAAAT GATATGGATTTATTGCCATCCATCGGTGAACAAGAAATAACAAATAACAC CAATGCTGCTTCTTCTGATGCCCCATCACATCGACGGTCTAGAACAAAAA AAAGAGGGTCTGTAACTAAAATGTGTGACTGTAATGTATGTGGTAAGTCA TTTGCACGGAATGGTGATCTAAAAAGACACAAGCTGAGTCATACTGATTT AAAACCATTTAAATGCGAGGAATGTGGGAAATCCTTTTTGTTGAAAGGAA CTTTGAAAACTCATCTTATCACTCATACAGGTATCAAGCCATTTCAAtgt gaaatttgtgaaaaacgATTTTACCAAAAACATCAGTTAAAGAAGCACAT TGCTAACAGACATTCTATAAACACCCAATCTTTCAATTGTAACGAATGTC GAAAAACTTTCAAGGCAGAGAAATCCCTGTTAGAGCATGTAAGGTCTTTT CACAAAGGAATTAAATTTGAGTGCACAGATTGTGGGAAGGGTTTTACCAG AAAGAGTGATCTCAGGAAGCATGAAAACAGTGCTCATAAAGGAATTTACT CTTTTCAATGTGAACTTTGTATGAGAGGGTTTTCAAACAAATCTCACTTT AACTACCACCAACGTACATCATGTCAAAATGATGAAAGCCAAaaccaaaa acagcaaaataatGATAATCTACCATCAATCAATTTACACCAGGAAACAG ATGAAGAGTACCCTGTGATAGTTCTAGATACTGCTAGATAACAGTTATCT GCAAACGGATGAATATAatggataaagaaaataaagtggTTGATTTCTTT TCCTTTCAAAGCCCTCTTAAGTTtcgaattttctactttttctatttttc tatttttcggGATCTTTTCAAATGGTCCCACTCTACCCTTGTTTATCTGC ACAATGGGATATTCTGGTGAATTTTCTCTGAGATCGTCTGTCTTTGTAAT TTTCTTGGAATCAATATTTATGGTGTTTTTTATTTATGTGACTTATTaat ccattttctttttctttccagataagaaacaaaataagaataaaaattag aaaaatataaatgtgATGCTGGATATTGTAtagtgagtggaatattatct gCTTTGTTGTCATCCAGGAGAATATCCAAATTCATTGAATGTAAAGAAGG TTGGAAAGCACTTCCGGGGATTCAAGATTTGAACAGACTCCAAAATAATT GTattatatcattttttcttAACACATTCACTGCCAAGcccttttcagaa attgaaTATTTGACTTCCTGGAATTTGTCAAAAGTTTGACTGTCAAAGCC TTTTTGCCTCACTTGCCTTCAAATTGTATACCGAGTGACGCATAATTTTG CATAGATtgtaaaaatacaataaaagaGCAAGTAAAAAATTCTTAAGGAA GCCTAGTGACAATTATTAATGAGTTTTAATGGGTGTTTTTTATCATTAGA CATATCTTGAATTTGATGTGAACATTTTTTGGGGGCTTTTAGAATTTTCA TAGAGCCCTGTTAACTCTCACTCATTGACCAGGTTCCTTGAAGTATACTT CACTTCGTTACTAATTGCCTATATTTGTTCacttttttatctattttcct TTGAATGTGCTGCATGTTATATGGTCTttcattgttgttttttatttttt tttaggaaGTACagaatgaattttgaaatcaacaatATAAAGATAAAAGA AGTAGCTCAAGATGAGGGAGAATCTAATATCccaatcaaattttcatttg ataTTCGGAAAAACGATGAAGTTGTTGGTACCTGCTTTGTATCTATGGAT AATTTGCGTGATCTAGTTAAGCTTGTCGATGATGGAAGAAATGATTTTCT GTTCAAGCCGAAATCAGCTAAAAAACCAAAACGAAAACGAGTGAAACAAG CCCGAGTGAAACAAGACCATCAATGTCAGGATTGTGGTGAAATATTTCCC ACAATGTTGGGACTCGTGGAACATTATAATGCATTTCACGAAGGCTTGAA GCCTTTTAAATGTGATTTGTGTGGTAAAGATTTTACCAACAAATATAGTC TTCTTAATCACTTGAATCTACATCTTGATATCAGACCATTTGAATGTGAA CAATGTGGCAGATGTTATTCTCTAAAAACTAACCTTATCAAACATGTAAA TACTATTCATAAACGTATTCAAAGATTTCAATGTGAGCAATGTGGGAAGG GTTTTTACCAGAAATGGCAACTTCAGAAACACGTAGATATAAACCATAAA GGAATAAAAGCATTTAAGTGCACAGAATGCGGTAAATCTTTTGGACTGAA GAGATCATTGGTTGCACATCAAAAAACTCACACAGGCATTAAGCCTTTTG AATGTCAAGTTTGTGGGAAAAGTTTTTACAGGCGATATTGTCTAGACATT CATTCAAAAATTCATGAAGAGACAAGAGAACTTTTTCAGTGTAATGAATG TGATCAAACATTTACCTTAAGAAGTAACCTCATTGCTCATCAAAAGAGAC ATACTGGGATCAAACCGTTTCAATGCCAAGTCTGTGTCAAAAGTTTCTTT AGGAAATCTTGTCtcctaaaacatcaaaaaacacATGAAGAAAATCAAGA ACCTGCTAAAGCGTTTCAATGCACTGAATGTAGTAAATCGTATGCAAGTA AAAAAGCTCTTGTTCTTCACCAAAAAACTCATGAGACTCGAATAAGACCG TATAAATGTAATGTTTGTagtaaaacttttttacgaAATACCCACTTCCA AGATCACCAAAAAATTCACTTAGAGAATCGAGAACAATTTCAATGTTCAG AATGTGAGAAgtcatttttaagcaaaagcaGTCTTCTAGCTCATCAAAGA AAGTCTCACGAAGATGCGCAACTTCTCAATGAAGCATCTGATCAGGCAGA AATCTCAATAGGAGACGATGGAATAATAAACGATGAAGTATCAGTTATAA TGGAAGTACAAAATTATGAAGAAGTACTGAACGAGAAAGAAGAACTGAAC GAGGAAGAACCATCAAATGACTTGGAGGAACCATCTGAGAAAGCTCCTTC TTTTGAATGCACAGAATGTGGTAAATCATTTTCGCATAAGAGATCGCTTG TCAGTCATCAAAAGAAACATACTGGGAATCGACCTTTTCAGTgtgaaatt tgcagtaaatCATTTTTCAGAGGCTATGACCTTCAAATTCACATGAAAGT TCATTCAGAAGCTCGAGAACGATTTCAATGCTCAGAGTGTGACAAGTCAT TTTCTAGCAAGGGCAACCTTTTAGCTCATCAGAGAAAGCCCCACAAAGAA CGATCAAATGGTTTGGATGAATCGATGAATGAAGATCAATCCCTTGAATG TACAGAATGTGGTGAATCGTTTACAAGTAAAAAAACGCTTGCTAGCcatc aaaaaattcataacGGAATAAAACCATTTAAATGTGACATTTGCGATAAG TCTTTTCTACGTAAAAGCTCATTGAAAACCCACCAAGAAATACATTCACA GACTCGAGAACGATTGGAATGTCAAGATTGTGGTGAATCGTTTACAAGTA AAAAGACGCTTGCCAGccatcaaaaaattcattcaggAGTAAAACCATTT AAATGTGACATTTGTGATAAGTCTTTTCTACGTAAAAGCTCATTGAAAAC CCACCAAGAAATACATTTAGAGACTCGAGAACGATTCGAATGTCAAGATT GTGATAAGACATTTACATTAAAGAAAAACCTTTTAGTTCATTGCAAGAAA TACCACAATGATCTCTCCCACGAGGAAATTGAGAACAGTGATGAAGATGA GAATCAGGAGGAGACAACTGGTTCTActactcaaaacaaaagttttgaaT GCACAGACTGTGGTAAATCGTATTCAATTAAGAAATCACTTTACAATCAC CAAAGGACTCACACAAGTATTAAGCCATTTCAGTGTGAAGTTTGTAGCAA ATCATTTTTTAGGATGTATGAGCTTAATGTGCATCGAGAAGTACACTCAG AAAACAGAGAACGATTTCAATGTCAAGAATGTGATAAATCATTTTCGAAC AAGTCCAACCTGGCAGCTCATCAAAGGAAATTTCACAGCACGACTTCAAC CAAAAAGTGATAGATTATTTAGTTTTACACCCCTTGATTATGTTCATTTC TATTAGTATTATTATATTGTTAGTGTtgttctttattcaaatataaaaTG CTTTAAATTTCTTGTCTCGTTGCATTCTCTTCTTTGGCAAAc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070600TCONS_00070600Clytia hemisphaericatranscript
TCONS_00070601TCONS_00070601Clytia hemisphaericatranscript
TCONS_00070602TCONS_00070602Clytia hemisphaericatranscript
TCONS_00070603TCONS_00070603Clytia hemisphaericatranscript
TCONS_00070604TCONS_00070604Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070601-proteinTCONS_00070601-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:43997..53188 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZNF334PREDICTED: zinc finger protein 334 isoform X3 Homo Sapiens
ZNF814putative uncharacterized zinc finger protein 814 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.74 22.61 11.61 9.02 22.61 16.01 20.32 18.91 11.59 9.58 11.85 8.85 9.25 7.9 10.55 10.27 15.58 15.53 6.27 6.23 14.58 12.13 38.78 35.35 10.28 15.91 7.29 5.15 23.59 26.69