XLOC_044070 (gene) - C. hemisphaerica

Overview
NameXLOC_044070
Unique NameXLOC_044070
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:934168..943866+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044070 ID=XLOC_044070|Name=XLOC_044070|organism=Clytia hemisphaerica|type=gene|length=9699bp|location=Sequence derived from alignment at scaffold_58:934168..943866+ (Clytia hemisphaerica)
GTTCAAAGATGAAAAGCATGCGATTGGTCAGATAAGAAGCTGGACTTAAG AGAAGCCAGTTGGAGTTTTTTTCTTACACCTGATCACCAACCTTTTGTCA TCTCATTAGCAAGACGCTATACAAATTCTTTATCCCAAACCACGACCAAC ATTTCTCCTAACCGATCAAAACACAGCTTTTAACCACGTGACAGGCTGGc catttcaaccaatcagatcaCACTATTGGTCGGTTCCAATCTCTTTGTGT GTTTTCTCCGgaacttctttttctttgttgatgatgtctgaaatttttgt ttcgaGGGAAATGATGAGAGGATGAAAGATGATTTCCTGAACTAAAATTT TTTCCTGAATTCTTTCTTGAATTAACCCAATTTTGCAGCTAGCTTCTTAT GATAGTTCATTAATGGAAATGAATTATTTGATTGCTTGAATGAAAGTTGG TGATGGGTTGGTTCATGGGGAAACAGTGTCTTCTTTTGTTTGTGATGGCT GCAGGCTTGGTTGCCATGGCAATGCGATGGGGATTGGagaaaacctgaaa aacaaaatattaaattaagGTAAGGAAActtatttctcaaaaatctccaA ATCTGAATCTCCAACACCGCCTTGCTTGAAAATCACCAAATGAACAAACT TGCCAcaataaaatttgaaacattgaaattttcaaacctCTTTTAGGCCA CTCTAGGTTGTAATAAGACATATTGTACATTTTAAAACAACTTTCATCGA AGAAatagaaaggttggtttttaaatatttacttGAGTCCAGAAAAGAGA GATTCGGATTCGACTACAAGATAATAGGCGGAAGATGTAAAAAGGATCAC TGCTTATAATATTTAACACAACTACATTAAGATTTGTTATGTAAAACAAA CATTCACCGACCTGTATATAGTAATTGAAAGTCACGATATATAGACATCA TCGTCTGTCAGGCTTGCTAAGACCCACCTTGTACCTCTGAAAATNCTTGA GTGCTTGAAAGTCACGATATATAGACATCATCGTCTGTCAGGCTTGCTAT GACCCACCTTtacctttgaaaataaaaagagtCATCGATTTAAATAAGAA ATCAAAGCAGTTCTTAGATGCCAGTGTAATATACCAGGTTATTcgacaaa aaactgaaaaatattggATTAATCATATTTTCTTTGTACcagaatatcaa aacaaacccaAAAACTTCGTGACATTAAATACTCGAATCACTTGGAGCAA AGAAAATTCGAATTGAataggagaaataggaaaattccaactttttaccc caaaaaagatcgaaatttggtcaaaattgatcaaatttgtcccggtaagg gtcgtaCAATCCACAaagttttcctttgttttctccttttcagTCCCGGT AAAGGTCCAAGGGTCGAAAGttgggcggcacccccccccccccccccccc cccccccccccccccgcccccccccccccccaccNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCC CCCCCCTCCCTCCCGGGAATTGAATACAAAGATTTTTAATCCAGAGATAC TGAGACAGGAGTGTAAAAATAATAAGGCCattaagaattgaaaaaaagtt ttcacgtTCTCTGTGtcacaaagaaaataaatttttgttttcttcaatTC GAGCAAAAATAAACCTACGGATTAGACGTAAACTAAACCTACAGAAAATT TGGAGgccaatttaaaatttctttgacttttttttgcagACTgagtgttc ttaacattttatcTTGAAGTCTCTCAATTCCTTGTCGCTAATATACTGTT GTTACTTTAATCCTGGACAAGGTTTGAGTAAATCTTAATGAGGGATAGTT CAAGGAAAAGATTATTTGGGTGCAAATTTGGAAAGCTCTGTTGGCCATTT TCGGATAGAATATTACAAATTCAGAAACTAACGCGTTCAAAATTCATTTG ACTTGCAAcccaataatttcttcaaaGATGGTTTCTTAAAGACGACTATT CAAAACATTGAagtaaatatcattttttttgcttgaattcatagattttt agtatattttccAGAAATGTAGAGGCCTACATTTTCAATTACCCCCTCag gcttgtgaattaaaattgataagtAAGCAAACTACATCActctcatttaa aaacaaaacctttaatgaaGTCTAAAATGATGATTTGATTATTATGTATC Tcgaatactttaatcggattaattttcgcgatttcgcgaatttttgccat tttcgcgaaattaaaactcgcgaacacgcgtgagattcctgattcgcgaa attaaatccaccacacaAAACTTTTAgaattgtatttttggcggagaaac tagttccaagtctccatttatggcaaaaaatggctattttcagctgtttt ctagCTTAGtcgcgaaatatttcaaaactctgactcgcgaaattaaatcc agaaaatttcgcgatttttttagctcgcgaaatttaatctcgcgaaattt aatccggttGAAGTAACTCATGTTTTTCATGctgaagatgttcttaattt ccaAACACTCCCTTCTCACTGACTGGGAACTCTTCCCACTGGAGatattg gccaaaatttccatcccatggtaaaaaaaaagaagcaatggaattcaaat ccccggccataaaaaacataggaatatcaatccccatcgagttttcgTCG ATAAAATTCCaccgggtctgcgagaagggggtgtattaaactaatttttt ttatctcaaatAATTCATGTTTTTCATGCTTAAGAGGTTCTTAATCTCTA AAAAGCACATTTAGGTGAATTATGTGGGTTACATTAAAATGTTGAGCGAT TGAAATAGCTAAAAACCACAGTCTAGTTCTCTGATTATTGAAGATAACTT CTGAAGATGAGTTCTGAAGATTTCTATATCCAATAGCTGCTAGAAAATCC ATGAATCTATGAATTCCATCAGTGAAGGCAAGGGCTGGCTGAATCTGACC AGCATTTTAGGGGCCCTTGCATTTGGATTAcaagatttgaaaatttaagt GGGAAtcaccaaaatatttttcattcgaTAGAACTTGATACTTTTTCGAA GAATTTTGTTTAAGTTTTGCTGAATCATGTATAGGCAGTGCATGGCAGAT AATCCATTTTGAGTCCGGATATTTTTTATtgagtacactttttttataag aataaactatagaAGAGCATAGGGCTTCGATGGAATAAATATCAGCATTT AAGCTTTGCATAACACCTGTCTTAGTTAAATGGAtagaaatactcacaaa atcgacgaaaatggtgaaaataagaatttagtttggttttgtgtattttt gttgaaaagacaaTTCCGAGTGGAAGCTTcttaagtaaaaataattcgaa aaaagacaggcttaaaattttttggatgttcCTATGAAAAAAACTTGTAA GTCTAATATTGAGAACCCGGAGGTTCATCTTCTCAAACGCTCTGAGTGTT ACATAAAagcaaaattgtaaaaaaaatcactttaaggGTAACTTTTTCAC TTAAGTTCCAATCTTGAGGGTCAAGTGCGCTCGTACCCGACATTCTCCGA CATAAGCAGCCCCGAATATCAGGGAAAGTGGTTACCAATAGTTACCAATA TTGTCCACGCCACTCAAGTTGTCccaacgaattttcaaattACTATAGCC TttcatttaaaagttttgcAGCCCCTGTCCGGCGGAATTTGAGCAACTTC TATCTTCTAGGTGGGAAAATATCACATTTCTTGGAAAGATCAAATAGCAT AAAGTTCCAAccgttttttctttttgtcttgTCTCCATAAGATTAACCTT GGTTGcatgaaaagagaaaaaaagctTTGACTTCCTGTCTATCTACTTTG AATGAAGATCATcaaatagttatttttctcaatttcaaaGGTGTGTCACA CGCTTGAGTTTAATGAAATGGTTCCTCCCCCTATGATAAAAATACTTCGT TAAACTACACCCTCATCTGTTATTACCGGGTGGTTCAGAAAAAACATGTc gaaacttattttttaaattacacaaagagttttttatgtttttcgttTGG TCGATTTTAACcccataaaataaaatatggAAATTCTTATAAATGCCTGA ATTTTGTTATAACctaaaacaataaaatcaaaagCGTCTACCATACCAAG ATAATCTGTTTGGTAATTATTATGTCATATCCTTTTTACTTAAGACTAAA AAATTCTAacttagtctacacaatagacagctccaggcttttaggccttt ctcttggtctataggcactgctagtAACCCTCACCGggaacattcacaaa agatgtttatcaatagagatttcaaataaaagaatgtttaaaactcagct gattggcttaagtttcgaaactctctattgtttcattaaaaccttagtac gcatgcgatttatccggagaatttcaatactcaaaacaagagcagtgctc atatcccggAGAGTTGGAGTTTCACGCCCGAAACGAAGAAGATCATGACG TAGCCTATTCTAACTGGGCCCTTTTTacctaaaactaaaaaaatttctAA CTGGGGATGTAATAAAATTTCAGAAGCTATAAGCGATTTTTCACAAGATG TTGTTGCACTATGTAGCCTagcattttactacttttttcTCCGTTTTTAC Tgaaaaaaacagaagaaaaaaaaaaaacttgttatttctgtgttgaaaaa gaaaagttactgATTAGCGAAACCAGTCAAAGAAGttcaaaaaactgtta attGGGATTTCAGATCACACTTCATTACCATGTTTCGTTGTCATGGTAAT TCTTCGTTTCATGAAATACAGCTTAAGATTTAAACTTCCCTTTTACATTG GAATAGGCAACGAATAACTTAAgttgaaaaatcttgaaatggctgaattt caattcaatttgttgGACTGTTCAGAAGATTTAGGGACTTGCTCACGGAC CTTTTTATGCCCGTGCGTGACGGCGGGAGAGAACGCCAGGGCCGTTGACA AATCTTGCTTTTTGTTTGGTTTGATGTCAGTTCTTCCACTGTGTATGTTT ACGAATGGTCACGTGAGAAAACTCATTCGACACAAATATAACATCAAGGT AATTCCATTGATCCAAACCCTTAGATGGGAAATGAAGGCCAAAACGCGTG ACCAACTTGGCTTTCACACAACTTGAAAGTAAAACTTATtgctagatttc gaaaaatatccCGCTAAACTTTTTCTTGgttgagaaaggttaaaggttCC TCTCTAGCTCTTTCGGGGCTTAAGCTCAATGGCTGATTCTTTTTAACCTG GATTATTGAATGACTCAAAAAAGAGGTCAAATTTATGAACCTTTGAGTTT GTTAGAAATAGGTGAAAATCTTTTCATATGCTGCTATGTGTTCGTTGGAA GGATAATTATGAGTTATTTATTGAATTATACTTTTTCAATACGAAAATGT AGAGAGAAAACGCCTTATAAAAATACATGTTAATCTAAATAAAGCATTtg ccaaaaaatatttcaacttgATCAAAGAATATTCAATGTTCAAATGTTTG TGGCTTGACTTAATGAAGGAAGCTTTCCAAAAGCTTATCTTCCTGATCAC GTTCGGCGTTTCGtttctttgataaaaaatcttcttttcctGGGGGAAAA TAATTGTCTAAGCCAAGTAAAGGATCATTTGCCAAAGGTGGAAAATATTC TGAAACCAGCAAATCGTCTTTTTGTTGAGATGGCAGGTAGACGTCCGAAG GGTCGTTTTGAGGTGGGATGTATCCTGAAACTAGCAAATCGTCTTTTTGT TGAGATGGCAGGTAGACGTCCGAAGGGTCGTTTTGAGGTGGGATGTATCC TGAAACTAGCAAATCGTCTTTTTGTTGAGATGGTAGGTAGACGTCCGAAG GGTCGTTTTGAGGTGGGATGTATCCTGAAACTAGCAAATCGTCTTTTTGT TGAGATGGCAGGTAGACGTCCGAAGGGTCGTTTTGAGGTGGGATGTATCC TGAAACTAGCAAATCGTCTTTTTGTTGAGATGGTAGGTAGACGTCCGAAG GGTCGTTTTGAGGTGGGATGTATCCTGAAACTAGCAAATCGTCTTTTTGT TGAGATGGCAGGTAGACGTCCGAAGGGTCGTTTTGAGGTGGGATGTATCC TGAAACTAGCAAATCGTCTTTTTGTTGAGATGGTAGGTAGACGTCCGAAG GGTCGTTTTGAGGTGGGATGTATCCTGAAACTAGCAAATCGTCTTTTTGT TGAGATGGTAAGTAGACGTCCGAAGTGTCGTTTTGAGGTGGGATGTATCC TGAAACCAGCAAATCTCGGTATTCCAGTTCAGGAAGAACGTCACTTTCTt ctaaaaatacaaagaaatcaaattcaTCTTCAATCACAATCAATGAGGTG GGATATTGTGATAATGAGAAAATACTTCAAGAAAAAAAGCTATAATGGAC ACATTTTATTGGTTAAATAAAACTCAACAAAATACCTTTAAGTGGAAACC CATAAAGAGCATTCCATTGAAGCGCCAAAGTGATCAAAATGAGTCGCATG TCCATCATGAATAATAGCCGAGTTTAAGTGGTATGGATGTTCTTCCCCCA CTTAAGTTATATCCTTGCAACTCGGTGGTTTTTCATGAAAAGCTATTACG TTTGTTTTGCTGTCGTGTAAAATAAACACCATACACAAAATCTTTTCTCT GTCAAAAGTGGCAGCCATTATTATGTTGAACATTGAATGAAAATTCTTCC TACTTCCATCAGATAAAAGATTGTTTTGTTTATCGCAATGTCGTGTAAAA CACACACCAAATTACATATTTATTTTCCGCTCAAACTGAAGCGCACCTCG gtttttcaaaaagagtttCGTTTGTTTTTTGGATGAGTTAACAATCAAAT TCAATAgtgcacccccttctcacagaccattGAAATTGATAgacatttga aaataatgaaataaaccaatcctcactgcaaaacatTTACTATCTTTCTC ATCTCCActcgattttctttttttaaaacaaaagaattgaaatcttgatt gataaaaaatatgagaatatcaatccccatcgagtttcagtctgttTTTT TCATCCCTACTGCTACTGGCTGTCCttccgggtctgtgagaagggggtgt actaGTGCAATCCTAAAAGTCGCCTTTCTTGAGTTGTCTATGGCGGGATT TCGTTAGTTTAGGAAAACCTTCCTTAGATACCAGAAACACCAGGAGGGtc tttttctgtttattttccTACGTAAACACGTAACACGTTTTTGATTGGAG GAATCCTCATGAAGAAACACGTAAGATGTCGAAATATCATTCATAGTAAA AATGGAGAAAAGGAGAGTGTCAAAACTAAAAAGCTCTACTAAAAAAGCGG AAGAAAATACGTCTGCAttggaaaaactattttttatgTTATTAACCTTT ATGAACTTTATGaacctacaatcatggacataaggtctgtagacttttca aaaattcctcaATAGTGccaaaaaaaagcctttttgacGCTTGGGAAATT TCCCAAATGAACCACAAGTGGTTATTTGGCAGAAAACACCTACAGGCTTC CTAACACTCCATGTAGCTTTTAGTCCTTgtgatttttggacttttttggt GCACCAGACAGCTCTGAAaagttgtttactttttattaaaCCATCTCAAA TATGGTCTAATTAGATATCTTCTCGAATAAGTTGAAGAGCAAAGCTCAGT GAAACCTTCAATCTTAGACAAAAAAAGGTCTGAAGAACTTGCAAAAATTC ATTTCCTTCAATCTTGAGTGGATTTGGCTTATGGACTTGTTACCCAAACT CTCCAAATCCGATAAAAACAACATTGGCTCtggtaaaaatgggttttcag ggcttatttggaatttttttatgcatttttgaaaagtctacaacATCCTT TTGTCCGTTACTATTGTACTCCTTTTTTCTATGAGAACTAGTAAATCTTT ATGACGCTCAGTTGTTCTTATGGTTGTCatgtttctatttctataaGTTT TAATAGCCCTAATTTGACCCTTAATCGTGCTTAGTCTGCTTAGAACTCAG TCATTCCAGGTTCAGCAATGTCcttattttcgttttttttagcCTCATTG TTTTcgtaaaattgttcttacaatATAAAGAATTTAGTTGGAGTAGGGGG AGTAAATCAAATTCTTTCATCTATTCTTTTAATTGGAGTATGTCAGAATC TTTTAGTCTTAGGTTTTGACAAAAACAAACATGTTCCTATTAAATTTATT ACCAACAAACGTAGGTATGATATTACAAATTGCGaacaaaatacacgttt tttataagaacaaactatgtaagaacatgaggcttcgatgatcaaaatgt taagaacaagttaagaacattgtagggcttcgcggactcgaaaacagcca atttattaggaaaataaacaaaaattacatgaaaaatggggaaaataaga acatttctagacttgaaactcaaaaagttaagaacatccgaaggcttcag aaattttggatgAACGCGTCATCTCTTCTCTCACCTTCATCTTGTGTTTC TCTTCTCTTGTTCAGGGTTCGTATCCTTCAGACTTGCTGGCCAACCTTTT GTGTCCATGTTGCTCATTGGTTCAAGATGCAAGggtaacatgtttttttc ttttctgttcaTTTTTTCTACTATCTGGAACGAAAGAAGAGGAACAAATT GTTTTCTTTCCTAGACTTTTGCAACTGCTCAGATAAATTCCCAACTATTT TTATTAGAATATGAGGCCCACtggaaaaggtttttttattcaacgctgta atagaccttttcataaattacgttaggaacatcacttgcctcgttttgaa attattgtcaaGGTGATTAACTCTCAGcgaattttattaaaactaccttt attcataaaaaaaacatttaatgtctcaagggacataatcaccatgtcaa ttgtttgaaaacgaggcaagtgatgtttatgacgtaatttatgaaacggT CTATTGTCATCACATTCCAATCCTCCTAACTATTTCTcaaaatgttgcat tttttaGGAGATCGAAGCCCACGCTACACCACCCCCTGCAGTCAAAATAA TTCGTCAATAACTGGAGGAGATATTTGGGGAAGAAAACGATATATTAATG ATTTATTTACTATCTTTTCATTGACGCACACACGAAATTGTTTATATATA AACTTAaataatgtaaaaaataaatttcgtaTTCAATATATGTACATTTg gttttaaaaaataattataacttctaaaaagatatttggtTTAATTCTTT CCAAGAAAAAACTTCATTGCGATACAATGCACTGTATAATGTTCAACCAA AGCTCTTCGATGGGATCTATCGGTATTCGAATGAAGATTCAGAACTTCTC TCAAAAAATGATATCCACTCCACCTCTGATCATTCTAAAAATTCTCTCAA CGCAGATTTTCCGTCCTTGAGTTGAGAGGTGATGAGTATAAGGTGAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070859TCONS_00070859Clytia hemisphaericatranscript
TCONS_00070860TCONS_00070860Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070860-proteinTCONS_00070860-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:934168..943866 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.57 0.92 0.5 0.3 0.37 0.69 0.58 0.97 0.27 0.49 0.43 0.46 2.95 3.72 0.31 0.42 1.16 1.69 6.96 5.99 2.2 1.58 1.3 0.92 1.5 1.33 0.37 0.15 0.21 0.63