XLOC_044114 (gene) - C. hemisphaerica

Overview
NameXLOC_044114
Unique NameXLOC_044114
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:646471..652245-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044114 ID=XLOC_044114|Name=XLOC_044114|organism=Clytia hemisphaerica|type=gene|length=5775bp|location=Sequence derived from alignment at scaffold_58:646471..652245- (Clytia hemisphaerica)
CTCGATCAAAGGACGATTGTGAAATCGAGGAAATGCGCGCGAAAGCTCGC TGAAAATCAAAACAAACCAACAAAATGGCCGACAACAAAAAACAAGGAAA ATCAAGAAAGAGAAAAACAACAAACGAAAAGAATACCAGTTTACAATCAA CACTATGGACCTACGATGAGAAACAAAAATTTGTATCAGGTATTTACTTT TACTATGAAAGTGAAAATCATAGATAGGCGTTTCCTCCTGTCCTGGACTG GAAGCGAAAGTATAAGCGACCTGTACTNTATAGATAGGCGTTTCCTGGAC TGAAAGCGAAAGTAAAATTGACCTGTACTCAATTAATCGAAATATACAAG TTTACGTCTAAACTCTCTGCTCATTCATCAAGACAAACCTTTTTTTGCTC AGTCATCACAAATATCTTCATCTCGCCCGACAGTCTAGCAAAAAGTTAAT TTTTCTTTCAGAAAAAAAACTATAATTTGTTTACCTTTATTCTTGCAGCT TCCCAACATCCAAGCTCTCAAACATCATAAATCAAATGAAATTACTTTTG ATTTCCCGTAGAAATTATGCAATGAATAATTCGGGGGTCAATAAATGAAG ACTTTCTTTTCCGCACAAGATTTATTTACTTATAACGAATTATTATCAGT AAGGCTGGAACTTCGATTTTTGAGGATTACGATTTTACCAGTTTTTTAGC GATTTTTGCCTCGCTAACCCAAATCTCGCAACCTCTTTACCTCGCAACCT CTTTACCTTAAGGAAGATCGAAATTAGAGTTTTTCAGCGTTCCGAAAAAA ACGCATAGCAGAAATTTTTTCATCTTCACAGGATCGATTCTCAACAACAA AATACACCTTTTGGTCTTTGAGTTTGTTTCTGACGTTTTTCATTCAAAGA ATATCGATCACTTTCCTTTTCCCCTTGAGCGCGCAAGAAAAAAATGATTA GCTCGCATTTTCGCGCAGGCGAATAAAGATGAGGCGGCGTTCTTGCACTG AGGGTGCTACTTAGTTTCCGCCCTATTTTGCGCCCACGATAGAATGGTCC AAACACGGGGGTATTCCAAAATGATAAGCTATGTCGTTCTATAAGTGTTT ATTTTTTAAGAGATACAAATAGTATATTGAATATTATTAACTTATTTATT TAAGTATTTTTGAGTGCAAATTTAAATATATGGTTAAATAAAAAACAAAT AATAACAGTTCTGTTTATTCCTCAAACCCCCGGGAAAAGATTTTTTGCAG ACTTAGCTATTTTACAAATCTCGGAAAAGAACTCCCATGGGAATTCCGAT ACCTAACCCGATTGGTTAATTTCGGAACGGCTTCAAGAAAGTCATAATGG CAGATAATTTTTAAATTTTCTGAGGACTTGTGTGTTATTTATTGATGTTG ATGGCTTGTTGATTCTTTAAAGAAAAAAGATAACAGGTATAGCTTTTTCT AATCCTGGAATATTGAGGTTCCAGCTACACTGATTATAGATGGCTGTTTG TGACGCACTGACATGCATGCTGTTCGCTTGTCTTTGTAAAAAAGAATTTG NATGTTTCAATATATTTGTTAAATATAATTTTTGATTACAATACTTTACA TTGTATTTAAAGTTTAAAAAAGTGGATTCTACTTAGTTCTTTGTTTTAAT GTCTAGCCCCCGTCTAAAAAGAAGTCCCATAATCACGAGATTTTGGCAGT CGGGTGTTCAAACAAAGGCGTTTTTATTTTTCCACGCACTTACAAATTTT TCTTTAAAATAGGCATTTAAAATATCAAGTTTGAATAAATAATAGTATAA AACCTTATTTTAGCAATTCTAGCTTTACGATAGTGCCGCAGATCATCAGT GGATAATATTTAATTATTATTATCCCTTTATTTTCCTTTATTTTACTATC TTTTGCAAAAAAAAAGGAGAAATAAAAAAGTTGTTGTATTTTTTACAGCT CTATTCACATACTGAATTTGAAAGATCTTCTATGATTTGTGCCTCGCTTT TGCGAAAATTTAGCTTAAGTGCTTACGTGGAGCATAGGGTACATAGTCCA AATATGCGTTTCCCGTAATTTTTGTATGAAGAGTTAGGTCTATACTGTTA TTTGTTTCGCAAGTGTATTAAAGTTCTTTACAAACATGTTGAAAGTTTTC ACAGATAATCAATATTCTTTTCTGAGCAAATTCTAGGTTGCTCAAAATTC TTCAACAGTTGTTAATCATCTGCCACACTCTAACAAGAAGTAACTTAGGA AAAACGATCAAAAAATTGCGTTTTTAGCAAAATCCTCAAAATTTTGCCAA CTCTCGGAAATTACTTTTTGTGACAGTGTTTTTCACCCTTACAATATTGA TTTTCTTAATCAGCATGAAAATACCTTTCAAATGAGGGGTCACTTCGCTA TGTTTTGAAAATTTTTGAAATTTCGATTTTGCTGGCAGAGCAACGGTGGC ACCCTACCCGTGGTAACCTTAAAAAGGGGACCACAGGGTTTTAACATGAT TTTTTCTTCTTTTTAAACCCAAAGGCAACTTTTGACAAATGGGCTAAGAA TTTATGCCATTTTTGCAAAATAACATCCCCCCTACGCAATAAATGCTAAG AAAAAGCACAACAAATTTCTTCCTTTGATCAGCTTTGATTTGCTACACTT TGTACCATTCTTCCTCGTGACTTATGTATAAAAACTTTATTAACAGATCA TTAATTTCATATTTGATGGGGCTTGTCTTACTAAACTTGGATTTGTTGTG AACTCGGTCCATTAGATAACAAGAGGAAAATTTAACAGATTCTAATCAAT ATTTCTTTTAGATAGGAACATTTCTTTCAGATAGGAACATTTGGCCAGTT CCTGTATGCTGCCACAATCAAAAAGGTCATAACTAATTTCATAGAAAAAT TACATTTGCGTCTTTTTTTGAATATCTACCCCAATGGCTAGCCACAATGG CTGAGCTATTCCTAGCATTAGAATAGTTTTGCAAAAACTGATTGTGGTAG ATTTTAGCAATGCAAGATCTCCTTTCCTTGCAAGTATATTAAATAATGGC AGTCTGTCTTGATTTGCTTTCTCTTTTACTTATTTCTTTTGAAATATCTA ATTTTCCAATTTCAAAATCTTTTCAAAATCTTTAAAAAATTTCAGTTGTA AAAGTTGGATCCAACTCCATTTTCTGTTTACCTTTTTCTTTATTAACAAT GAGTCTAAATATGTACACAATTTGATATCCACTAATTCTCCTTGAGCATA CTATTTTCATTCAGTTGGTAGATTTATTGATGACCTTTGCGCTATTAATG ATTTTTTCTCATGTTATAATGATTATCCAGAGGAGCTACAATAAATTGAA AGTTGAACATTATGTAACACATGCAATATTTTTTAATCTTGACATAAACA TTGAAAATAACATCTTTCACTACAAGTTATTGACAAGACACCTTTCCATT TTTCGTTTTGAGAATGCCACATAAGTATAGTAATTTAACATGTTTTACAG AACTAATTGATTTTTCAAGAAAAATTGCCTTCTGTAAAAAAGCCCCACCG AAAATCCAAAAAGAAAAACCCAAAGTCCCACCTTTATATTTGAAAACAAA ATCAACAAACTCACCCAGAGTGGGAGGGGGTGTACACTATAACTCTTATT GTGATATTCAATTTTAGGATGCTAAAGTGGAACCTAAAAACTTTCCCAGA ATTTTTTGAAACCTTTTTAAAAAAACCATAAAAGCACCACTTGGAGTTAA ATCCCGAATCTGCTTCCGAGAAAGTCACCTCACTTTCTCTCTTTTAAGTG TCTGTTTCTTATCACCCTTTACTTGTTTTTTCTGCAGCTCTTTGTAAAGG ACCTCCATATCGGCATGAAAATGGAAGTATCAACTGGATGCAACTTAAAC GATTTATTGGAACCAAAACATTGCAAGAAGTTAAGCATTTCGCAAAGACG TTTCATGCTATGGAGCATGGGATAGCTTATGAAGAATTCTCAACCAGAGC TGCTATTGATGTCTGGCGTCAATTAGCTGAAAAGTCAAAAGGAGAAGGTA TTGAACATTTCATTGATTGTAGATTGTGTGCAGTCACTCTGTAATTTCAT TGTTTAGGTTGAGTGCTAAATCAGTATTTTTCTCAAAAACACTCCTAGAA GCTGATGCCTTAGCGATTCTTGTAATTTCTTTGTTCTGTTCGACTTCATG ATTTAGGGGATAACATGGCAGATGTTTGCATTCCACAAGCATTAACTGTG GCAGCTTTGGAGCCCATCAACGCTTCTCCTATGGGTGAAGGTTCCTCAAC ATCTGCAACATCATCATCAGCTCCAAGCTATCGAAACATTTATACTTACC TGAGCGCAATCACAAGAGGTGCGGAAGGGCCTGTGCTCAATTCATCTGAA TCTGCTATTGTTCTGAGCATGTTGGAGGATTTGATTCTAACTTTGTCAAA ATCACAAACTCTCATTCAAAGAGAATTTCTACACTCTTCCTACCCTGAAC TTCGATCTATCTTGCAGACACAAGAAGGGCAAGAAGCAAACTCAAGAAAC GCTCATTTCAATTCAATCAATCCTTTTGGTGTTCCCTTTGATATTTTAGA CTTTCAGCTATTAGAGCAATGTATGGAAAAAGGGAATGCTGCAGCTGTTG ATAGTGAAAGTGCAATCGAGAAAAGACCTGCTTCAAGGCAATCAAAAAGG AAAACTAAAGCAAATGACTCTGATGCACAGAAGTCTCCAGTACAAACGAG GTCTAAAAGAAAATCATCTGAAGAAAAGGATACAGACAATGGTGTTTAAA ATAATGGAATAGATTCTTTTTACTCATATCTGGAGACTTAGAAAATGAGG CAGGAGATAATGATATGTATGACTGATGAAGGGCCACTAAGGTATCCGAG TTTATTTATATCATCTTATTCAAAATATTTTGTCAGTAAAGTGTTGCACA AGGGATAGCAATCTTATAACAGATCATTCAGTTTGCGCATACTATTCTCT GCTCTAAAGGGATGTATGGCAATTTTAACGATCTGACCTGGTTATTCAGC CAAAACAACAGAAACCGCGTTGCCTTTTGCTTTAAAAAGGAAAGTATTAT TATTGTTAATGTTATGTATTGTTATGTATGATTGAAAATGATTTTGGTGC GATCATTTTGCTTTAGCTAATGTGCACGCTCAAAAGATCATTTAATATTC ATCCCAAATGTGGGTGAAAAAAATCAAAGCAATGCGCCAACCTTGGTAGA TTCTCTTATAGAGCCATTGTCTTTAGAGTGAACACATGCACCATGTGCAG ATAATCAGAATATGTTCGGAGATTTAGATAGATATTCATGTGTTTGATGT AAGGAAGCCTTTTTGTTCTTTGACCTCCTTTTCTTTTCATCTGAAATACT CGAAAACATGGGCAAAATAACAAGATATGGAAAGTCAAAAGGGTGTTTAA ATAAGCACTTTTGGTTGTTGGTGGACTCCAAATATTTTTTATTTGTCTTT TATATTGTCCCTCACATGACTAAAGGTTCAATCTCAAAATAAGTGTCTTG GAAAATTGGAAATCTTGCAATCCTGTTCTGCCTTTGAGATTGGTCTTTTT GTCATATGAAAACATCGACTACATTCCTCTACATGAAAAAAGGGCAATCT CAAAGATGACCACCACAGTAAAACTCTAAATTTCACAAGGTATTAATTTT GAGATTAAACCTTAAGTCGTGTGAGGGACGGTATGTCTTAGCTAAAGATA GAACCAATAAAACGATGAAATTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070977TCONS_00070977Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070977-proteinTCONS_00070977-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:646471..652245 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.79 33.04 25.16 23.54 7.21 6.28 7.43 7.68 8.38 7.44 5.51 4.96 3.65 3.49 6.26 6.05 10.28 8.55 2.76 3.36 4.75 5.31 14.41 13.15 8.92 8.41 3.9 2.58 6.84 7.03