XLOC_044190 (gene) - C. hemisphaerica

Overview
NameXLOC_044190
Unique NameXLOC_044190
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:966389..967963-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044190 ID=XLOC_044190|Name=XLOC_044190|organism=Clytia hemisphaerica|type=gene|length=1575bp|location=Sequence derived from alignment at scaffold_58:966389..967963- (Clytia hemisphaerica)
CGTTGATTTCTTAATCTTAAATAATTCCATATTAAATGCTATAAAATATC
TTAAAAACTTTTTACTTACAAAATTTACAAAAAGAACATAATCAGATTCA
CAAAAGTGTTTCTTCCAAATTGTTATTGCATTTATGCAGAACAGACACCA
CGTCTTTTATATCATGGCAAATGTATCCATCCATCAAACTTCTCTTACGT
AATGTTTCGTAAACAATACTCATTCCGCTACCCCCATCGTCATGGTTCCA
GTCAAGTGGTTCGATACGCCGTCGAATAGTATGCGTAGCTTGAGTGCCGT
CGGACCCCGCCGAAGAATGGTGTTGCACAGATAGTACAGACTCGCGCATG
CGTAACTTTAAACGGATAATCTGTTTTTTGAACTCCATGCGGAATTCGGC
GGACATCATATAATAGATAAACGGATTGACACATGAATTGAGGACCAGAA
ATGTTGCAGCGAACTTCCTATGCGTTTCTTCAATTCTCAAGTCAGTAAAT
TGTTCCAAAAGTTTGATGATATTCCACGGTAACATCAACAAAGCAAAACA
AAAAACAACAACTGCTAACATTTTAGTGACTTTTCGTAATTTTTTATATC
TGGTCTGTATATTAGACGATGTTTGGTGGACGCTGCTTTGTCGCATGTGT
TCTTTTAAGAAAAAATGGATTCGAAGGAACGTCAACAAAATGATGAGCAA
GGGAATGAAATACCAGACGAACGTTTCCACGATGTTGTCAACAGCAACCA
TTGTGCTTTGAGCGTCGTGTGAACATACACGGAATAATATGCGAGTCTCG
TTCATTATTTTATATTTCTGTTCGTATAATTGATAAGACATGATGGAAGG
GATGGATTCGGCCACAAAGGAAAACACCCAAATGAAGAGAATGATGAGAC
GGATTCTCCGCAACGTCCATTTCGCATCCATTGAATGTACAATGGTGTGG
TAACGAGCTATCGCTATGGCAACAATGGTTGCTAAGGAAACGATATGAAA
GAAATCAGCAGATGAGGACAAAAGTTTGCACATGGGCTCACCGAGTGGCC
AGTTGTTACCAGATAACCATTTGACGGCGAGGACGGGGAAACTGATGACC
AGCACACAGAGATCAGCGATCGCAAGGTTCAACAAAAACAGGTTCTGATG
GTTCGATCTTTGTTTGCCGAACGAGAGGACGACCGCTGCACAGATATTTC
CCACAGAGCCGAAGAAAGCGAAGATACAGTTGATAGCAAGGAAGAAATAG
ATCATGTTTTTCGACTCCCCTGCTTCATCTCCACCATCATTGAAAGAAAA
ATTGCCAGGAGGGTGTATCGCCGTCAATCCATGTATTGATTCGTTCATTT
TTTGTTTTTTTGCTGAAAAATGAATGAAAATTAACTTTATCCAAAAAGTA
ACTAGGTTATTAAGGCTAAAATAAAAAAAATGTAGTGTTTCCGGAAACCG
GCCGGGTGTAAAAACTTTTTTTTTCTGACCCGGCCGCAGACTATGGGTTC
GTCTATATGGTTCCTCATAAAGAAAATCAAGTTGACCATTCAAGCTATCA
AACGTCGTTTGGTTAGATATTCCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071108TCONS_00071108Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071108-proteinTCONS_00071108-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:966389..967963 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
OPN4melanopsin isoform 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.11	1.6	0.83	0.81	0.63	0.83	0.43	0.34	0.24	0.3	0.47	0.47	3.79	2.91	0.5	1.22	0.59	1.16	7.27	7.89	0.23	0.33	2.46	2.18	0.95	0.32	3.19	2.22	0.76	0.83