XLOC_044283 (gene) - C. hemisphaerica

Overview
NameXLOC_044283
Unique NameXLOC_044283
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:398312..406184+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044283 ID=XLOC_044283|Name=XLOC_044283|organism=Clytia hemisphaerica|type=gene|length=7873bp|location=Sequence derived from alignment at scaffold_60:398312..406184+ (Clytia hemisphaerica)
tgtgtgtgtgtgtgtggttGTTTGTGTTGATGCATGCTTCAAGAGAAGGA
AAAGCAGTGGAAAGATACATCACAATAAATATAAGTTAAATTCATAAGGT
ATATCATGTATACATTATAGATCCTTAGTTACAATATGTTAACCTGATAT
CAGATCGCGATTGTTTTCTGAGGCTCTAAAGGGATGGATGAAAGCAAACG
ATCTGACGGATATGCGATCTCGAATTTGTATGCTGGCCCGGCGGTAGCAA
AGATACCtatgattttttaatttaaagtttttgtttaGTAATTAGTTCTT
GATTTGTGATTCGATTTTAGCTACATAATGTGAAAggcctatttttcaaa
aatttatagcCCTTTCTTAACATAATGGCGNATGTGAAAggcctattttt
caaaaatttatagcCCGTTCTTAACATAATGGCGCAAAACAACATTCTTG
TTATTGAATTTACTATTTGTCTTAGATGGTTAACTTCCAAGcccctttag
aggtttaccgtacGCTTAAAAAAATATGgtcatctgttatcaggttacat
tATGCTTATCTGATAGCTGATGTTTATACTGTTCCATCCATGACTCCATT
TATTTGTGTACGGTACATACTTCTATTGATATTAGGAGGATGGCTTCAAA
CAGCAAATTCACCAATGATGATTTCCAAAAATCAACAAGCTCACAAAATC
AGGATGGAAATAAATGCTCAATTTGCTTGAATCAAATCAAGGAAGATATC
CACAAGCAACTAAGTGGAAAATGTCAAATCTGTTTGGACAAAATCAAAGC
TGTTCCTTCTGGTTTCCCATTTGTATTAGCTGGTGAAGAAATCAACGAAT
TTGAATGTCCAATCTGTTCATTATTGATTCGAAACGCTACGGAATTGAAA
TGTGAACATCTTTTCTGTGAAGATTGCTTAACCTATTATGAAAAGGACCA
GTTGAACAAAGACGGGTAAATCTACAGAAGTTTTTATGTTTTGCTAGGTT
TAGGGGAGACCCCATACCCAAATGCGTATTTTTGTCGACGTCTTCAAAAT
GTGCTTTTTGATACGAAAAATGGGAATAGTATCAGGACCAGAGGCAATTA
GTAGGGCTGGGTTTAGGTTGAGTTAGGGAATGGTCATGGGCTTGGGAGCG
GGTTATAAAAGTAAACGTTTGAATTCTAGAggcgaaaaaagaaaattgaa
tgtTTGCTTCCATTAAGTTATGTATAAACTTAACAATGCAAGAAAACCTC
CACAAGGAGTTTATCCTGAACTATGCGAACAAGATTTACCTAACCCTTAC
TTATgctagaaaacaaaaaatgtgaGTGGGATTCGCGTAGTTTATTTTTG
CTACTTTCATTTGGGGTGAATTTCAGGACCATTTCCAGTTGGATGAGTAC
CTCTagttctgtgaaaatttcttcgatttcgaaagcttttcaaggggttA
AGACTTCTCTCTGGCTCACAGGATTGAGGAGGTTAAGATATGTTATTCAC
TCTCCAAACTATGTTATCACTAGactaattaatcatgtcagagggtgGGA
ACATAAAGACGGCGGTCGTTTGCTTAAATAGGAGCTgggtaggagaacga
gcaaaatttggtgagaggctgcttaTTAATTAAGCTTGCCGCCGACAAAT
TTTCCTcttacgcttacctaactcctacgctcacttttcccgcgtgatac
cgttccagaccgactggcgtgccagtctacctTACTACCTGGCCAGACAG
CcctcactttttaaaaaataacacAAACATTTCTAATCTTACACttatta
ttgttattgattTGTTTTAGGGATGCAAAATTCTTTTGTCCAGTTTGCCA
AGCTGAATACAAATCAAAAGAGGTAGGACTCTGTGTTATGTATCTATTGG
ACTTGTGTATATATGTGATTGTATTTTAAAAGACTTAAGACTTCTAAGTG
CTCCGGATATACCAAGCCCTAGAATTCTCCAACATGGCTCATGACTTATT
ACTGCTTGTAATAATACCGTGAGCATAAAAGCGGAGACGGACTGTAAGAA
TTTTATCGtgtattattatccatatagcggtcattaagtaagccattaaa
gattcgagcggcgggcggtattgaaaggttctatgactcaaatagtcata
cccgcgctgagaaaactaaggcgtcgtgcttcagagggctgaaatatcat
taaccgccctggttatagggcgataacgtcatATGCGGCCCGCTCAGAGc
tttattgaagtcgttgcattgaagtggtgagactaaaccgacgtcagaaa
aaaaaacttttttggtcatttgcggcccgctcgcaagggtacagcacctg
accccgaaaatgcagtaaaccccgagaatgtaggtttctcattttttagc
attgtagccctaacgatagttcaacttcataaaaagttgttttagagcat
actgttacatattactgattatttctagacataaaattttaacttgaatt
gattttttcaggccaaaatctgaatcgaagttgattggatactactcgaa
ttgagacattttttacataaatcctctctaaatcgaaatctattggaatt
aagttatgatgatagggtattttcttattcctaatgaactaaggaaatgt
gaaaaatagtccatttcaatatttattgttctaagttagatattttaacg
aaaatgtttgacctaccttttggggttagttgacctacaatttgggacat
cttcataacccgacataaaaagtctgtcaaattataaaaagcttttttgt
tttcttttcataacatgaaagtattacctgagagatgattaatgttggta
ttttaagcttttacgacgtgtcccagacccgctgggaccccagcccaatc
agaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGCTCTcagcaaccgaatct
tttcacctacattctgggggttaaaaagcgaaaaaatccaattttcagaa
taacaaaagctctttagaatattgttttggcataagatatttctaaaatt
tcctgttataattaattcagtcgaaaaaatatcaacattttactattact
agatttaaagccataaaaccaaacctacattctgggggttataacgaaaa
ttggagtcaacttcaaggaccaaaaaaattagactatctatcaaaagtaa
tgaaacaaacccctgggaaaggattttgggacttgggagttcaaaatttc
gtttaaaacattcaatatttttttaaatgcaaatctacatctctcaggtc
tgattcaaatttcacctacattctcggggtcaggtgctgtactcaaaact
tgttgaagtcattgcattgaagcgaaaagacttggatgacgctagaaaaa
aacgttgtttgaatttccgatattaagcagatattcgacaagaaaaatcg
gatatcgaaaattattcagtcgagcttgatgatattcgacgaagcgaagc
tgagtttaatttcgatatccgatttttcacgTTGAATATATGGTTTATCG
TTCACAAATTAGAAGAAAAGCATTTAAATGTTCTATTTCATTCggtcttt
ctctctttttatgacattttcgaacgttttactatCTTATAAGgatgtca
atttcattgtttttttctctttaactctttaattacaaaacgttcgaatt
tcctttctcttttgttGAAAGGACCTTTCtgtttatgtttttatatatgt
gacatttaaataattatttgatcaaTAGACTATTTTCTTTATGCTCGCTG
CTAAAGAAGAGATATTTTGCtatcggatatctaaaaatattcgacagtGC
GTTTTGCCTAGAGGTGGACGATAAGGATAATAAAagtaatagcgttaagc
tttcgttcgttgttgtcattaattctgcccttgcagttttattattagcc
ctctagtgccatttgctccctccgcttcgcgtcgggcccaaatgacactc
tcgggctaataatcaaccacctcaaactgaacgctattgttatatttttt
ctcAATCTATAAATAAGTTTCAATTTCTCTGAAGTGATATACAAATATGC
ATGTTGTATTCTGAGATTACACTATTTCATTGAATCTTTTCTACGTTTCT
AACTCGTTATTTGATTGGTACGGCTTTCATCAAAGATCCTGGATGATTAC
AACGGTTACTTTTTGTTCTCGCTGAATGAAATCGAGATTTGTCGTCACAG
TGTTATATTCATACGCTATGACACCCACAGTATCTAAATTGCGCACACAC
AATactaataattatttttttaagaattagaATAAGTTTTATTTTAATCC
GGGCAGTGTTAAAAAATTAGACCGGCATGGGTCGCGACTCTTCTAGTTTC
AAACCTACCGGTACATGACCAAAGAATTGGACGATCTCATCATACGATGT
CAGTGGCTTTTAATGGGTTAATTTAGCTGGTGTTATCAAGTTATACTTTT
ACGTTTTTACTTTAGAAATTCAACGTTCGATCAACCGATAAGGTCATACA
ANtctactttttccccaaattttccaaaaataggcaccctacgagggact
gatttttctattttggtgtttttgcgaccctacctgggactcgtggaggt
tgaaaacggtaccctgaccagcggagcatccccgtaacccattttgccct
agtacccccccNTGTTTACAAAAGGAATGCGAATGGACAGGCTGTATCAA
AGACTACAAGGTAACGAAATACGATGATCTTCTGGTTGAGAGGGGGCACA
CAGTAGATGAGCCAATTGGAGCAAACTGCGCATGCGTTCTTTTAAATCGT
TAGTGGTTAAATAGCGGAAAGAACTAAGGGGAATGAATACGTAGGGGTAG
GGTTGTGAATGgcaaaatatgtcgttctttattgtcattttttcgttttt
tgtcgtttttcttCGTTTCTCGTTTTTTCTTCGTTCTTTCATAGTCTCTT
TATGGTGGTCTCATTTTGGCACTTCCACTCCCTCGGGACACCTTTTGGTC
ATCTGTATATCCGTCGGGTCAAATACTTAGAAAAGTCCGTCATTTCCAGT
ATGTATTGCAAACTTGCCGAGAGGAAGTATCTCTATTAATATGGTATTCT
AAGGCTCAATGGGCAAAACTGTGTGATATAGAATTATAGCTTACTAAACA
AATCAATGATATAGTTCGGGGGCAAAATGAATATCAAGAGTCATTTGATA
AATTTATGAATGGATATTATTGATAGTATTCAAGTATACTATATGAAAAT
AAGCTTTCGGATTATAGTGCCAAATCTTGGTTTTCCTTTTTGTAGAACCA
TAGCAAGAAGTGTGAATTTTTAGAAGTAGAATGTCCAAACAAAGGTTGCA
TATACCAAGTTAACGCCAAAGAAATGGAAGAACATCTCAGAGTTTGTTTT
TACCGTCAAGTAGAATGTGAATACTGTAACAAAGAATGCTCTTTCACCCA
GTTGAAGGTAAGGATATAGATGTTTTGGCGAACGCGatagtcttttgaat
aactaattactccacatacattactttctctcaaccaataaaaacatgat
aaattatcttgtctctaggtaactgttgtggagtaatgagttattcaaaa
gaccgtcGCGTTTACCAAAACAACTATTAGATGACTTCGAGAGGTGTATA
TGATGCTTTGGAATAATGCTGTTAAGCACAAACCTTAACCTTGTCCCttt
gtatcccaggctttatttacgcttctgatggacgccagagaataatGCAC
AAACCTGTAATCCTGGTGaattaaaatatatttggatttctgGGTTAGAT
TTCGTCCTCTATCAGAATCTATCAAATAAAGAGCTTATCTGATATTCGAA
TAGCGGATCGGCCACGCAAAGGCAACGCTCCAAAGGAGTGGGCGAGTTCG
GCTTCCCACTTTATTTCACAGCATATTTCCATTTAGGAGGATTAATATAA
CCGCCCTTTTCGTTTTAGGAGCATTACAATAACTGCGAAGGATATCCGAT
ACCTTGCAACAATTTAGGATGTCCTGATAATATTCAGAGATCTTTGGTAT
ACCTTTTAATTATATCAGTGAACCGTAACCGATTCAGTTTGAAAGTCGTG
TTATTTCAAAataggttttttttattttatccaaAACTTTTTAATGTTCA
TTCTAATGTTTTTGCATCTCCAGTCAGTCTGatgaatatatttatttcaC
TAGATGGAAAATCATTTAGAGAATTGTGAGTTCGCGATTGTTTCTTGTCC
CTTTCTTGCATTTGGTTGCACAGAAAAGGTAggcatttttattcatttgt
tatgatttttgctttaaattttgctttgatCTCTCACCATACGACATCCA
CGTGTCACAGACCACCCGGTGAGTGTAGACTCCGCTGGAAAACTTCTCGg
ttaagttatggcatgtcttaaaactACCATAATTTTTAGCGCATTAACTG
acagaaaacgaccaaacaaatcaatgactgaacatgaagggtaccatgat
gtagtttctaacctgatgtgtaaccttattgttttttcgctggttttcgc
gaaaaaccgcaataactgattatgacgtcataatcgatgacgtcataaaa
actaaaaattgaatttctcaaggattgtttatccaattgtcttcaaactt
tcaccaaaggtGTATCCTACTTAAGTCaatcatttgaagaaaaaaaatca
gtttttgcggatttttgcgaaaatcagcgaaaaaacaattagtaCCCTTC
GTGTTCAGCCATttatttggtcattttctgtcggctaatgcaatctaaaa
attatggtaatattcagtttttgagacatgccataacttacgcGAGTTGG
CCAAAACTTCGTCTCAGGTGGGAAAAATCCCTTAAATCTCATTTCCACTT
GATTAGTGATTTTAATTTCAtctaaatttgaaattcaattgttgAAGTAT
CCAAATTTGGGTCTctatagaaatttttatcccaatCATAGGAAAAGTTT
CACCAGGGCACTGAGAAAGGGGTATATAATTTTGGATTCAGTCAATGTCT
ATTTTCTTGATTTGAACAGATTCAACGACGTGACATAGAGGATCATAATG
GAAAAGCAAAATCGTCACACGACACTCTTCTCTTCCAAATGGTTAACAAA
ATGAAACACGAAAATATAGAGAGAGATCAAAAGATTCAACAACAAGACCA
AAGAATTGAAGAGTTGGAAAATATCGTCACAAAAAACGAAGAGGAAATCA
AGGAGCTTCAAAACAACTCAATGCAACAAAAAGCTAGCATTACCAAAGAT
CTTCTAGCACTTGCCGATAAAAATCAATCAATTGAAGACtctttaatcaa
aacaaactcaaTGACTTCCAATATTGTAGACTGGGCTAACAAAGGGGGAG
ACGGCTCAGCGGAGAGATCAGTAATTTAAGACTGTATATGGTTTCGTACC
ATCGATTAACTTATATTCTCAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071243TCONS_00071243Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071243-proteinTCONS_00071243-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:398312..406184 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.7	0.75	1.67	2.58	3.78	3.11	9.92	10.82	11.58	9.62	13.02	12.42	37.17	38.01	9.99	9.99	4.75	7.48	8.67	7.18	6.52	4.41	3.61	4.54	17.78	15.31	6.16	6.33	6.91	9.19