XLOC_044319 (gene) - C. hemisphaerica

Overview
NameXLOC_044319
Unique NameXLOC_044319
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1659737..1665003+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044319 ID=XLOC_044319|Name=XLOC_044319|organism=Clytia hemisphaerica|type=gene|length=5267bp|location=Sequence derived from alignment at scaffold_60:1659737..1665003+ (Clytia hemisphaerica)
CTCTTGACATTTTATTATCCTTTTGTTCTCATGTATATAAAATATACCAA CATGTATGGGAAAAAGAATCAGTTCGGTTTTGCAGGCCAAAATAATCCGA CTGGCGGGACAcaaattttgtatatttttactaaaaacgatacatttatt ttgaaattatggcATCTTTAATTTTGTTCTTTATTGGTATGGCTTTATGC AATCTATTCTCAGGTATGGTTTCTAGGTCAGATTTACTACGAAGAGTTTC tggaacattttttaaaatcagCCCTAGCGAATACAGGGATAATTTCCGAc acagctggcacacaacgttgtttcaacgttcacctaacgttatattgatg ttgtgaacgttagataaacgtcgaaacaaaGTTAAGTGCCAGCTCGGTAA TTATCTCTTGGTTTTAGCCCTAAGCCACCCCTAACCCCCATAAATATTAC ACTTGTAAATATTACTACCTTTCCTGTTAAAATTTGAGCTTCCTTTTTTC TTCCTAAGTTTCCTTTAGGCTCATTCAagtcataaatcaaaaatttacaa aatattttcatttacaGGTTTACAAGCAGTTCCAGTTTCTCAAAATAAAG ACGATGTAGCATCGAAGAACGAAACTAACAAAAATATTATCCAGTTTTAT GATGAAAGATTTGATCTTTCGGAACTGAAGTTGGCTGGTGATATAATGTT TTCTGAAGCACAACTCAACGATGAAGTTAACGATGATGATAAGAAAAAAG ATCGAAACCGTCGGCGTCGTGATACTGTCGGCCCTGTTAGGCCAGTGGCG ACATGGAAAGACGGAGTGGTGCCTTATGTATTTAACTTTGGAATGAGTAA GTATGAAACAGTTTTTGAACAATATTACAAGCTTAGCTCCAAGGATATAC CAACACAACCATAAGACGACCATACATGGCCTTGTAAAAGTTTCATCAAA TAGAGGCAGTAAAACGCGACCCACGTGACTGAATgacttattaaaatttt gactttttggctacTTCAGAGAAAAGCACGCCTTTTTTCTTATAATACAA GCCCGAGTTACAACTCTTCCTTACTCGGCTTTTTTATAAAACCGTATTTA TAACTCGTTTACTGTAACTCGCCTTTTCTGGACGTAAGTTTCCGACGAAC TGAGATagtttcagttaaataaatatgatagtttctttttaaatgagata gtttcgttttaaatgagatagtttcgttttaaggGAAATAGTATCCCCTG AATGAAacaaagtttctttttaaacgagatagtttcgttttaaatgagat agtttcgttttaaatgagatagtttctccTGAAATGAACTTAGTATATCC CCTGAATGAaacatagtttctttttaagggctctgaccatagtgaatttt tcataattgccgtgtttaaaaaatgttttctgactgatgtaaccaacaaa actatggcatgttataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTATAAacgcaattctttgttaaaagtgttaaggaacctgaaat ataacttttatgttcaaataccaaaatcaatttttggactatggtcagag cccttaaacgaGATAGTATCGGTTTAAATGACATAGTTTCGGTTTAAATG atatagtttcgttttaaacaagAAAGTATTTATTGGCGCTTCCGCGCGCC ATAGAAACCTGCTGCAACATTAATCTACTTTTTAATCCATGTTTTCCTTT GGTGTGGTTTAGAAATTAAGACAAAGACGGAAGACAATTTTAGTTCcaat caatcaaatttcaattttctcttATAAATAGCTGATGAGCAGAAAAAGAA GATTAAATGGGCAATGAAAATTATTGAACGAAGATCATGCATCAAATTTC AAGAAACAAGTTTCACGGATCGACCAAAACATTTCCTGGCAATTACAACC GGCAACGGGTAAGCCCCAATATTATATACAGTGGAatctccgtaactcga acatgcacggggaacacaaatttgttcgagataCGCAGTATTCATTTTTC CCTTATCACTTGTCGTTGTGtttctgagacaggggtgtacaaaACAACAC GATCCAATAAGTTTATTCAGACAATCAATattacaaaaaggaaaaaaaaa actaacaataACTATGATTTAAGTTTTACGAAGCCAGAAGTTTGGCAACT GACTATGGTCGGTGTAGATTGTTTAGTGTTTTGCCAAGAAAAACCATAGG TCAACCCCCTTGTTACTGTACTCAGGAAATGCGGTATGCAGACATCCGCG gtaaaacaatcaaaacaaataatttCATTGCCAGACAAATAGTGGGGACG TACGTGGGTCCgggacaccgaaataccgacacatTTTTGTTTATCACCAA AATACCGACGCAAAAAAGGTCAATACCGACACACCGATAAACTGACCCCC CCCCAAAATATCGTTATGCTGAGCAACCCCATACTCAGTCTTTTTAAAGA CCTCTTTCGGTTTACTGATACGCAAAGAAGGGGAATCTTTTTACGTCAAG ACCTATCAGTAACAGTCGAAACTATCTTGGTTAAACCTGGTTTCTTACCA TGTTCTTGGGTCCTTCTCGTTGGTCAGATGCAAAACATTCAAATATTTGG ATCAAGTCCCCAGAAAGTTTATCAGAGCGCAGTGGTCCTAACTATCCATG ATTCCGTTTGACAGTGAAATGgctttaatgttttttttacttctaCAAAC ATTTTTTAGTACTTTTTACAAGGTGTTTCTACGGGGCTACACTCTGTAGC ACAAAAGTGTATATATCAATTTGTAATTAAAAGCTTTGATAAGCTtttga tcaaaagtttctaatgttttttaatTTCAGGTGTTATTCTACTGTCGGAT CAAGCAACTTTCCATTGAATATTTTATCGTTGAAGTTTCCAAATTGTTTT GATTGCTCATCTATTGTACACGAATTATTACATGCCCTTGGCTTCTTTCA TGAACAGCAAAGAATGGTAAGAGATTTCGGGACCAAAAAATACCATTATT CTTCTTTAAACTATTCCCTGATTTAAAATTTAACCATTTTAATCCAACTT GATTTTGAGACGTACGGGTTtacattaatttttttcaccaAAACAAACTG ACATAACTTAAACCTCTATCTAAAAAAGTATGGTTTgtatcattattttc aaatttgtgcTTTTAAAACACTACGTCGTGGGACTTGCAGATATGAAATA GAGGCATATATTCCAGTGGCACATCTCTGTACCTCTTTGCGCCAAAATCT TCTAATAAACGTGGGAGGGGGGTTTGAAATAAGAGGGTGGgtgaaaaaaa tctcaaacctcaataaggggggggggaataagaatgtcctgagaagaaaa ttttcgaaaattaattagcggggagGAAGCTTATTATGTACCCAAGAGTA GGACAAAATTGTTCATGTAAAATACAGAGTGTCTGTTACAAAAAGAAGAT TCTTTCTATTCATCTAAAATAATCACGACACCCTTTTTACGGTTTTTAGG TTCGGGACAAATACGTCAAAATTAATTGGAAGAATATTCAACCAGGGCAA CAATACAATTTCAAGAAAGTCAAATCATTAGTAGATACAGATCAAACCTA TGACATGAGAAGTCTAATGCACTACAAATCGTAAGTAAATCGATCAAATT CGTTtctaaatatctttccaacaaatcACCTTTAAACCCTTGAAGCTTAG ACGAGACTGGGTTAGAGTTCATCAGATATCTTGATGCTTtggataaagaa aaaagtacttATTATAGCTCCGGTTGTTATTACGTGTGCAATTCCTTCTA TAGGCTAGGTATTTAGATTTCTGCTCCGGGGTACTAGGGTTAGGGAATTT CTAACAAAGTGAATAAACTATGGACAGACTCTATGATATCACACTCCAAA GCTTACCACAGTGAAAACCTACTGACCAGGATAATGTGAACATTTTTACA AAAGTATACTACTTGTAAGATTCGGATAAGCAGTCCATTTTTCACTCATC GGGGTTCAACTCTCTCTAACTCGAACTCCTGTCATTTTAATCTCTCCGTA ATTCGACTAAAAAATTAATCCCCTCAACTGGAAAATGGTAgaaaatactc tctgtaattcgaaaattactctaattttaagaagattcggtcccttgaag atcgaattagagagtatcaactatattgaaaagaaaatacaaCTGGTGAA AAGAACTGTAAATCtgatcttcatcttcttcttttcatAGATACGATTTT TCGAGTAATGGGGAACCAACAATTGAATGTATAAACGCAGATGGTACTGC TTGTCAACTTGGTGGGAAATGGCTTCGATACTCTGATacaaaaaaactga ataaagtTTATGGATGTAAACCTAAAAGATTCGGATACTCATCACGTTAT AATAACCAATAAACttccttttcaaaatattgcttcGGTAATTGAGGAGT TTATAAAAAGTTTACCCTATTAATCAAAGCAatactttaaaggttttatt tttaagtgTTCCCGTGGCATATCAGACAtaaatttcatatcaggacagtg tctgcctatcgttatattatgctgatataagcaaaaaaatgttttctttt tctctttctgaccaatcttgctccacatccgtgtcaatccaatgtgaaaa agcttgtaaattaaaattgacgagtggagtaagcaaacgatatcactctt tatttaaaaacaaaacctttaataactTAACGCTTATAATAGACGTGGTa ctggtttcaaaacgaggcagtcgttgNATGTATGTTGATACTGGTTCTGC ACTGGCTCAACTAGAAGAAGTTGCCATGGACCGTCATGCTTGGAAAGACT TGGTCATGAGGAGCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071313TCONS_00071313Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071313-proteinTCONS_00071313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1659737..1665003 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22 1.24 0.4 0.28 0.36 0.06 0 0.08 0.05 0.24 0 0 98.48 69.51 26.3 17.41 3.98 27.4 0.47 1.23 0 0 0.91 0.79 0.03 0 0.24 0.53 1.38 1.31