XLOC_044353 (gene) - C. hemisphaerica

Overview
NameXLOC_044353
Unique NameXLOC_044353
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:869075..877570-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044353 ID=XLOC_044353|Name=XLOC_044353|organism=Clytia hemisphaerica|type=gene|length=8496bp|location=Sequence derived from alignment at scaffold_60:869075..877570- (Clytia hemisphaerica)
CTGGCAATGATACAACTGAAAATGTAAGTTTTGAAGATATAATTTTGTAT
TTTACTTTATCTATGATGACTTGCTTAAGCCATCACCTATAATATGTCAA
AATTAAGGAAGTAAAGGAGAGCTTTTTATTCATTGTTTTATCCTGTCCAT
CATTTGTCATTCATTGCCATTGGCTACCTTTCTCCTTCTCCAGGCTTCTG
TGGTTTCACACACAGTAAGCAGAGATATCTGTGATATCCTTATTTTCATT
TAATGCTCTTTTAATGGTGTTTGCATTTTACTTTCACTTTAGCAGTTACA
TCAATATGCCTTCTTACCTGTCTTTAAAAATATAAATAAAAGTAATCACG
GAAAAGGACGCGAAAAAAAAGACATAAGAGTAAGAACAGAGGAATCAAAC
TCGTTAGAAAAAGTACCACTAGAAGTCATAAAAAATCAACCTGAATAAAT
GCAATCGAAATTCCAGAGAACTGCATAATTCCCCAAACAACATTACATTA
CTATGTCAAACTCCCATCACATATAAATTTTACAATTACGTCAGAGTAGA
CTACGCTCGTCACCGAAGAGGTTTATTTGGAAAGGGTAATGATATTTCAT
TGTTCGCTTCTTTTTTAAAGATTCGCCGGGTTGGAAAAATATGAATTTCT
TTGTACATATTTTACCTACCCCAAATATTTAGGAGGCTGAGTTTTAAACG
AATTGTCAAGTTGAAACGAACGATAAATGTATCAAGGTCTGTTTTATTTA
CCCCCTGGTGACTTTACAAAAGAGACTTAACTCGATGTTACAATCCAATT
ATTGAAAGTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCT
GATTACGCAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGT
TTAGCCAGCTTTCTGTAGGTAGAAGAAGAAAAAGTTTGTGTCAAGCTCTA
GCCTTGCTAGCTAACAACAATCAAGGGGGGGGTTTCAGGGGGTACCCGAT
TCTGTAATTCCGCCAATTTTTTCTCCAATTTCCGTCACACCGTCTTAAAT
TGAACCAAAATTCCGTCACCGAGAATTCCTTTGAAATTCAATATTTTTGT
CGAAAATTCCGCTAATTTTGAAAATCTTTTACCAATTCCGAAATTCCGCA
AATTTTTTTGCTAAATTCCGTTTTTCCGCACTAAAATTGTCTAATTTTCC
GTCTCCGTCAGAGAACCCAATTTCCGTAATTCCGTCTAAATTTTCGCCAA
ATTCCCCCCCCCCGTCCGAAAAAAGGGCCGATTCCGCCCCCCCCCCAACC
ATGAAACCCCCCCCCCCAATCAAGGTCATAATATTTGAGAAAAAAGGGAA
ATTCCCCAGAAAGTTTTGAAACCACCAGCGATTTGTAAGTGCTCCAAAGT
AGGTTCAAAGGGTAGAGTTTTAACTCTGATTTTTAACGCTTGAGGATAAA
GTTTTTTTTGGTATACTTTTTTAACACCTAAAGATTTGAGGGCCTTTTGA
ATGTTTTGATTGTCAAAAGAAGAATAAAAAAGAATTGCTAAAATCGAAAA
ATCTTAACAAATGTCAATTAACTTCAATAGACCTTTTTTCAAACAGGAGG
TCCTGTTGAATAATTATGTAGTCCATCCAGCCATAAAAACAATGATAGAG
CCATGCATAATTACTGTATCATGCATATTGTAATAATTATGCATGGTTTT
ATCGTTGTTTTTCTGCTGGACTACACAATAGACCTTTTTTCAAAGAGGCC
ACCCTGTTAAATAATTATATGCTAGAATTTCCATCTGGGGGGTTAGGACA
CTCTCCAATATCCTTAAAGTCTCAAAAGACTGAGGAGAGGAGCTTTTTCT
TGCATAAAGTACCCATATACAGCAGACAGAATTCACAGAGCGTACACGCG
CGGGCGATTAAACACGATCTCGCGGAATGCGGGTCAAAAATTCCCGTAAG
CAATCTCGTTATTTATCAATGTATGTATGTATGTAATAGTTTATTTCAAG
TTGACGAACAGGTAGCAACAAAGGCTAATAAAAGTCAACGCTACTTTACA
ATTTGTAAGGTGATTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCTTGAAAATCCGTATGCTTCAAGTTTAGCAATCAATAGTTCGT
GCGAGATGCAGTCGAAAGCTTTTGATAAGTCAATGAGTAGCGCTGCAAAC
TTTTTCTTTTCATATCAAAAAGTGAACCGTCTCTATTGGTGCCATGTTGA
ATGATTGAAAATCCCAGCATCAAAACAATGATAAGTTCTTGAACATGTAA
CATGGGACTTGTTGATATCTGGCCTGTATTTTTACTTACTGTTAAATCAC
TTTGACAACAATTTGTTTTGATACTTCCACCAAGTTTGTCAATCACACTT
CTTCTGTTATTCATATATCACAAAAATAGATATGTCTAGAAAAGCTGCTT
TTTGAAATAAGCGTATTTATATCTTATAGTATTTATCAGGATGAAACTCC
ATCAATCATTTCTTGTCTCACGAGACAAGTTGGTCAAGGTTGGATTGTAA
TGTAATGAAAGTAAATCATTTAGGCAATATGAACAAATTCATACAGTTTA
TCAATTACTTTATACAAATGTTTTGTGTTCAACAGCTCAAATTTGATTGG
ATCGATGAAAGATGGATTTCATAGATAGAACGAAACAATTGTATTCAGCT
AATCGATACACGATTCTGATTTATTAAAAATCTTAGGAAAAGTAGTTTTC
TTCTCAGAAAGCTGCAATATTATATTCATTTGACTATTGGTGATCCACTG
AAGGACTTAATAGTTTAATGAGTTATGTTTAAAACACAATAATGAAGTAA
AGAATTTATTGCTATTTTATTGCTGTATCGAGATAAAAAGTTATAATACA
CTAAAGGTATATTTACAAAACCTGCTACGGGATCTAACAATTCATTGAAT
AAAGGATCACTTTCTAATGGTTATAGTTGTAGAGCCAATGTTTTATTGCT
ACAATTATTTCAAATTATCAAATTATATTTTCTTTATTATAGAAATTTTC
TGTATGCGCTATTAGATGGACAAATTGTTCACTTTATCAACCCTTCTACT
TTTAGATAGAACTACAAAGAACACCACTTATTATTACTATGTTAGTATAA
TAATCCATTCCACATCGAATGGCTAATGAGTTTTTCACACACAAGATGCA
TCTTTATCTGAAGAGTGGAGAAAGTGAAAGATGGCTAACAGTTCAACTTG
TTGACGGTCACATACCAAGAATTGCTGGTTTATCAGATGATGATACTCTA
GCGGTATCAGACAATTTGGAACCAGCAATATGGTTTCGCGTGATGGTCCT
ACAATCAATAACAATAGACTGTGATAAACGTGTTGCTTGTTGGAGGAACG
CTACTATCGACAAAACCAGTAAGTGTTGTATATTGATGTATCTATGAATA
AGTTGAGAAGAAGTTAACCCAGTAATTTTTTATCTTTAGTTCTCTGTTCT
TCAAAAAAATAATATGTAAATAGGTTTTGATGAAATAAGTTCCAATTAGG
ATCCCATTTAACAATAGAATAATGATTTTCAATGTGTTATCTATCTACAT
ATTTTATTTTAACTTTTTTTCCTGGTGTCCTTGCTAAATAATTAGCGTAA
ACTCAATCTAAAATTGTCATTGTATCACTCTTTTACAGCTGGTGAACCAT
TGACTCATTGGTTATCTGGAGAAGATAGTTTTTATGACTGGGATGATGAT
ATTGACGAACTTTTCAATCTTGCATGCACTCTGGTTCAAGAAAATCCTCT
CGCTGAGCCCAATGAGGTTTGACCCTTCTATTTTGATTATTTATTATTGT
GCGTAATTAATTAATTAATGAATTTTATATTTGATGATATATTGATATAA
AGAATGAAACACTAGTAACTTGTTTAAGTTAGACTTCCATGGTATATTTT
CATGACTACTAGAAACTATGTTCCCTTATTTGATAACTCAATAATTAAAT
TCACATGTGCTCAGAAATAGATTATTTATGACGATGGAGATTTCAAACAA
CTTTATCAGGTAATTTATTACCTAAATTTTTCTTCATGTTTATTTTTTCA
CTTTAGGAATCAAGGAGAGAGAAAATTATTGTATACGAACAAAATCTCTT
TAAAATGTTGCACTGCTACGTGTTACCAAGGATCCAGCTTTATCCTGCTG
ATTTAGAAAGTGTCAACAATGCATTGAAAGCCCAAAACAAAGCTATATCT
CAACTCGAAGATGTGACCTTGATGCATACCCGATTAGCTGAACATTATAT
GACACAAATGAGGAATATCAGAGAGGTGGAAGTCTTACCAATGTTAGATG
AGCTGGTGAACGGGGGACAAGTTAGTGAAGAGCTGTTTGAAACTTTGATG
TATGATATCAAGAAGGCTGAACCAGCTCTTAGAAATGAGGTATATTTTTT
TCTTTTGAACTAACATAGTAGTTTTTTTCGAAGTTTTTCAAAAACATGAA
AACACTTTTTGCTTTTAACGACTTCGGCCTGATTATACCTGTTCAAAATA
TCCAAATCTTATTTTACCACGAAAGTCCCAAGAAATTGAGCTTAAGTTGG
TGCAACAAGAGGTTTTGCATGATTCAGAGGTTTTTTCTTAATTCATTTTC
ACAGATCAACCAAGCACAACTGAAAGTCGATAATTTAAAAGAAGCCATGT
CTAAAGGAGCTGTCAGTCGAAAAATTACCAATGATTTAGCAGAAGCCAGA
CGTACCCGAGATCAAGTTCACCAGAGTCTAGCGAACCTCCTAATGGGGAA
AGCTTTGGCTCAAACATCACTGGATATAGCACAACAAGTTCGAGATATGA
AGATTGAGTTGAATGAATCTTGTTCACAGTATGTTCGTTTGTATCGGAGA
GTTAAAGAAGAAAAGATGGTCTCAACTCAAACACTTGACAAGAAGGTAAA
CAAATTTCTAAAACAAACTGTAATGGAAGCCTGGAATTAGACAATCAACC
GGAGAAATTTCTTAACTTTTCTTTATAGTATTTTTCAAAATGTTTGTTGT
AAAAGGTTTTTTCCAAATTTGGTTTTGGATTGTTAGCGCAAGCAATTTAA
AGCTTTACCAAAATGACGTTTGAAATTTTCCTCGTCAAAAATGTCTTGCT
ATAAATAAGACCAAGTTACTATAGTCCTTAATAGCCCTGACCTCATTAAA
GGTCGAATTATGCATTTGAGATCATAATTAAATTGGTTAGAAAAACCGAA
AGCAGGAAAATTAAATTTTTTCAATTTTCCTCTCACATGGTTACTATGTA
ACAATAAACAAAGTCTGGGTCATCGACATTTCATTATTAATAGAGAATGA
ATAAGGATGAAGACAATTTCAAGTATAGTAGAACCTTCTGTAAGTTTATC
CAATGCTTTAAAGGATAAAATTTTCTTTTTGCCGCGATTTAGCCAAATAA
GCTGGTCCTTGTAAGCGGAATTTTGTCTGCTGATAGACTACTAAGAGAAA
TCTTCAACGTTAGTCTGGTGAAAAAAGTTTTGCTGTTTACATCGTGAATC
CTTTGAAAGATAGAAAAGAATATGATTTTTTTTACTCTTTTTCAATTTAT
CAATTCTGTAGTTACGAGCACTTGGTGTACGCGAATGTATATTGTCAGTC
ATCAAAGATCTGGAGAAGGATAGCCCAACATATGGTGAAGATCCCGAGAG
TAAGTGACTATATTCTTCTGGTTTGTTCCTGTGGTGTGTCTTTTACATAA
ATAAAGTGGCAGACCATCAGCGACATGTACATTTTTGGCCGAATTAGCAT
TAGCATTAGTAGTATTAACCTACCTCTAGATTTAGAGAAGGATAGTCCAA
CATATGGTGAAAATGTTTTGTATGGCTTAAATAAAGGTCAGCTTCATGTA
CATTTTTTTGGAGAGATTCTTATACTCGTTACAATTTTTTAGATTGCAAA
CACTCAAGAGTAAGTTTTTCTTTAGTCAAAGTTACTGAGAAACTCACTCA
GGACTTGTTGGTTACTATTTTACCCGCAAATTGCATTATGGAGATTGCTT
TACCAAGAGCTTTGCCAATCTTGTTATTTTACTTCCGTTTTTTTTTTTGG
TAAAGCTACACTATTTATTGACCCTTCTTTTAGTCAAAGAGACGAAACCA
GAATGGCAGACGTTGAACCAACGAATTTCATCCATTGTACACAACAAGGA
ACACCCTGTTGGTATCAAGTTCAAAAACTTCACACAAGAATTGCAATTGA
ATTACCAGAAGATCATGCGAACTACCGCTAATATCGTGTACGGCTCTTCG
CGCTTCATGACCAGTTATAACGAGTTTTACGTCATCAGTGAACAAGATTT
AGGATTGAATAAAGTCTTCTTGACTGACCAATGTAATGTCGTATTACAGC
ATTTGTACATGGTGTCTGAGCTTCTCTCCGAACACTTCAGTAAGCGGACA
CAAATGTTTATGCGAAAAGTGAGGTTATGTTATGAGAAATGTTTCTTTAA
TCGAATCGGGAGAGATTTGATTCTAGTCTATCGTGTTGTGCATGGGAAAG
TTATGCAAACTATTGAAGCACGAGTGAATGCTTTAAGAGAATTGAGTGTT
TGTAAGCTAGGCTTGCAGATGCGTGATGAATGGTGGTTGGAGTTGTTTGA
ACCTGATCATGAAACGAATTCGTTTGAATACTCGGAACCTGAAATGTCGG
ATGCATCGAATACCGAGGGCCGATCGTATGAAGGTGAGTTCGGTGACGAT
GAATCAACGAGTGATATCTCGGATGAAGATTTCTGTTCCGACGATGAATC
GGGCGCCTGTAAGATGCCAATGAACCCGTGGCGAGTACCGATCACCGATC
CGGGTCATAAAGAAATAACACAGAATTTATTGCGAAGTAAAAATAAAGTG
TTGTCGCGATCTTTGCAAAATCTTCACGACTATGGAATGAATCTTATTGA
AGCAAGTACGAAATTATTGGAGGATCGGTTTGAGAAGACTGCTTTTGAGA
CCTCGCCTGAACTTAACGTTGAAGTTTTCGGGCGTTATCTAGCTGACGAG
ATAGATGAGAAAAAGGAGCATAACATCCGTGAAAATATTCGTCGTTCACA
AAGCGTCAACACTATTTTGCATTCTGAATCGTCACATGGTAGCCGTCGCT
CGAGTTTGAGACGTACTTCTATACGACACGCTGAAGATACATTTGAAAAG
CATTTTGGTAGTGCTATATCACAGATTCGATGTATCTTTACGAATTCAAG
TCCGTTAAAGAAAATGCAGTGCTTGACGAATGCGCTTAGGACTGTATCTG
AGAAAATTGTCGAGTTGCGGTTACGTCTTTATGAAGAAGGCACTGAAGTT
GATCGTTCGAAAGTTGCCGTATCTGCAGACGATTTATTGCCGTTGCTTGT
ATTGTTGCTGTTGAAAATGGAACCACACGACGTTGCGAAACTGTACACGG
AACTGATCTTTATTTCTGACTTGATGGCGGATTTTTTGAGCTCAGGTGTA
CATTCATACGCCCTCTGTGAGTTTCATATTGCCTTTCGTGTGCTAGACCA
AACTTGTGAAGAGTTACAGCTATAATCAATATCAAAATGATATTCTTGTG
TTATTTCAAAAAAAAGGCATGTAAGTAATGAATTATTTTCTTATTAGATT
TGTAAATTTTCTCACATCAAAATCTTACAGTTTATTCTTCGTTTATCATT
TTTAAGTAAGAGTTTGTGTATACAGTAGACTCTCGCTTATCCGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071375TCONS_00071375Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071375-proteinTCONS_00071375-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:869075..877570 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.75	7.75	4.11	2.6	4.95	3.63	7.74	8.23	6.58	8.21	6.74	5.36	7.68	7.83	8.32	9.37	7.56	8.08	6.46	7.1	6.13	5.74	8.4	8.9	11.84	12.28	4.94	3.28	6.24	5.57