XLOC_044519 (gene) - C. hemisphaerica

Overview
NameXLOC_044519
Unique NameXLOC_044519
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:412084..417209+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044519 ID=XLOC_044519|Name=XLOC_044519|organism=Clytia hemisphaerica|type=gene|length=5126bp|location=Sequence derived from alignment at scaffold_63:412084..417209+ (Clytia hemisphaerica)
aaaaaatataacAGATTGGCGTTATTAGTCTACAACCATAGACATAACGA ATAAATTTGCATAGTTTTGTTGGTGGTTACGTTCAAAGTCCAGTTGATAT CTTGTGGCCAAACAAAGCGTGTTCTTGAAATCGGGATTTATTGCCAGTcg ttcatttattttcaaacatttgaagaactttgaaaaaaaatgggTGCAGG AGCTGGCAAGGAACAAGATggcaacaaaaaacaaaaaatcactaaaaaag acttaaagtttttcttaaaagaaattaaagaacATACTGCTGGCATTAAC AGTATGACATTAACACCCGATGGCTCCATGCTGGTGTCCGCCAGTGAAGA CGCCAACGCCCATATCCTAGACACAACCAGTGAACAAACAGTATCCGTGT TAAAAGGAcacgaaaaatatataaacTCTGTGGTGTGCAATAACGATTTC GTGTTCACCGCCTCAGCCGATAAAATGATCCGGAAATGGCGTATAGATAC AGGCATGTGCTCCAAAACAATGCGTGGCCACACATGCGCCGTAAATCGTC TCATGCTTGTAGACAGCTTACTTTTTTCATCATCATACGATCGAAGTGCA AGATGTTGGCATATCGATACTGGTGAATGCCTTGCAGTTTTTAACGGTCA CAAACTCGGTGTCTACCCATTGTTATACATTCCACAATCAGATGATTCCT TCGAAAGAGATATCACAGACCTCAATAATAACCACGATATATTAATCACT GGGTCAGCAGATACTACCGCTAAATCCTGGGCACTTAACACGAATGAGGT CTTATTGACGTATAAAGGCCATAATGGAGCAGTTTTATCTATGGCATGTG ACAACAGTGGGAAATATTTGTTCACTGGAAGTCAAGATTCAACTATCCGA TCATATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGGACATGC CGCTTCAGTGCTACAGTTACAGGTGAGATAATGATAAGTTTTTTTTCCAG ACATACTGTATTTTGTGATGTTTGTGACATTCACACATGTAATATTTGTA GCTTGGTTTAAattacaccccttctcacagacccggcaGGATTTATTCAG CCATTgcggataaaaataacggacagAAACTCGATGGCATAGATATCTTT TTtgactggggatttcaattctttcggtttcaagttagaaaattcagtgg ggatgggaaaaataacataatattttccagtgaggattggtttatttgat tattttcatcgGGGATAAAAATTGGCGGATAGTtctccaccggggacgat atttcggccaagttttccagtgggaaggggtccgtAAGGGTCTGTAAGAA AGGGGTATTAAATTACTCATTAAAGAGTCTCAGCATGATTTGAGGACGCA GATCCGCAACCGCAAGTACCATCTACTTTCTTTGATCCATAATAAAAACA TGGTTGGTATTCTGCCATAGGAATTTAAATAGCTTAATCATTCATAACTT TTAAATATTCCAAGAATGAAAGGCACCTATGATTTTTCTTCCTAGAAATG GTTTGTATTATACAttgtgtcccgaaaaaaagcggacaaatttctatata aagtaaaatccacATTATTCACGCCAAATTGATAACTTGTATGCTTGACA TTTCAATCTaaaaaacctattcaatcagCTTGGGAACGGAAAATTGTAAT ATTATTTCAATTATTAGTCCAAGTTTTGATTATTAGTTTAGAGGATTTTA CTCCATATAAAATGCCTCTTGTTTGGGACACGCTGTAAGAGGTTTATTCC TAATTGCCTTATTCAATTGTAATACCTATAAAAGCAATTCTTTTAGGTTG TTAACCGATTGCTATTTTCATCAAGTGCTGACCATACCGTTCGATGTTGG GTATACGAGTTTGGGGAATGCACGCGTGTCTACCGTGGACACACGCACAC TGTTGGTTGCATGAAAGTTGCCAAAGGATTATGTAAGTTCAGATATTGAT TTTGTCCTTCCTTGTTCaggggttttgctttgtttttggtaggctggcga ataaaaaaattaaccctggcgatttctagattctaggccgacgaattctt agcaagcgtagtgtattgattagcgtaaatatgtacttgaggcggcgaac cgaacttttcgaacggcgaattgtaattttttcgtgccttggacCGGCGA AATTCACCGTTCACCNCAGCTTGGGAACGGAAAATTGTAATATTATTTCA ATTATTAGTCCAAGTTTTGATTATTAGTTTAGAGGATTTTACTCCATATA AAATGCCTCTTGTTTGGGACACGCTGTAAGAGGTTTATTCCTAATTGCCT TATTCAATTGTAATACCTATAAAAGCAATTCTTTTAGGTTGTTAACCGAT TGCTATTTTCATCAAGTGCTGACCATACCGTTCGATGTTGGGTATACGAG TTTGGGGAATGCACGCGTGTCTACCGTGGACACACGCACACTGTTGGTTG CATGAAAGTTGCCAAAGGATTATGTAAGTTCAGATATTGATTTTGTCCTT CCTTGTTCaggggttttgctttgtttttggtaggctggcgaataaaaaaa ttaaccctggcgatttctagattctaggccgacgaattcttagcaagcgt agtgtattgattagcgtaaatatgtacttgaggcggcgaaccgaactttt cgaacggcgaattgttattttttcgtgccttggacCGGCGAAATTCACCG TTCACTGGACCAAAATAAGACCCCTGCTTGTTCAGAAAATACaatcagaa attttattttatcaaaaaattagaCCTTTTCATTTGGGGTATAATTCACA CAGTCCTCTTGGGCATTGTTtaagcaattttttttatttgcacTGATCTG AATCTATTCCAAAAGCATCTAAGTCAACTTTCAGTTTTCAtgccaaaaat gaaaaagacttTTAATCCTATTAATAATGTTTAGAAACACGAGAGAAAGT ATTCAAGCAAACTCAATCAGACAGTTTAACCATGGTTTAACTAAATGTTT CCTTTAACTTCTAGTGTTAACTGGGTCTGGGGATGATACAGCCAAAATCT TTGACGCGAAATCGGGAACAAACAAACGAACATTCCGTGGACATATTGGC TCAGTTAATGCACTCGTGGTAAGTAAGGAAATAAACTAAAGTGATTAACN CAAACAAACGAACATTCCGTGGACATATTGGCTCAGTTAATGCACTCGTG GTAAGTAAGGAAATACACTAAAGTGATTAACAGAAAGTCGTACAGTCATT CTTTAGTGTTATGTAgccaaatacaccttttcgatcgtagccgccaattg ccgtgtgggcatttttttgtccgttttaccaccctaaaaccgtcccagtc ttttttccgcacctatagacaatagaaaaaggtgtcagaaaaggattgga tcgagtttggGGGGGGGATACCcgcacggcaattggcggctacggtcgaa aaggtgtattgtatgTGGAACTTGAAGATAGGGTTGAATGATTTCCTTCA AGTCAATTAACTAAAGTGGTCAACACAAAGTTGCTTTGAAACTTAACTTG AGTATATCAACTTGCCCTATTTTGACGTTCGATAACTTCTCTTAACGGAA GCCAAGACAAGGCAGATCACAGAATCTAAAAAGATGGAATCAattaagaa taaaataaaacgGTGTCTGAATCCAAGATCTCTACAAAACCGTCGATAGT ATATAGAAGCACGAATCATTTAATGGATGACAGTAGCCTATATAAAACGG AGCTACTAGAAAAGTTAAGAAGTATAAAGGAGAAACAGAACTACAACGTA CATAGAACTTACATTAATTAATAAATCCCAGCCAAAAACGAAGCACAATT GAAAAGATGTGTCCTTTAAGACTTCTTAACTTAAACTAAGCTCTTTCTAT GTTTCCTTAGCTACACAAACATAAACTATACACTGGATCAAATGATGGTG CGATTAGGATTTGGGATGCATCCGGTATCGGTGAAGATGATGACGACGAC GATGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAACAACAAAC ACCACAATCTCAATCTCCAGCACCTAGCAACGACGATGCAGCACCGATTA ATGATGAAAATGCACAACCAGTTAACGAATAATGTATTGTATAAACAATT TGTAAAACATAAACATTAACATCTTCTTGTGTTGATGATGATGAGGTTGT TGTTGCCGATGATTTCAAGTCCAACTAATGTCCATCTAACATTCATAAAA CGTTCGATCGATGATCAAATAACAATGCGTGTAAACCCGGGGACGGAAGA GGAATAAACTTGGTAAGAAAATGAGACTGATTGAAACAACGCAGAAGAAA CTATCAACGAcgacaacgaggctcaaaaatgaaAACCTTCTTGAATTATG GACACGTGACTTCAAATTCTTTGCCACGTGTTTGGGGAAAAGTCCTGTGT GAAATTGACAATTCCCGAACGGAATCAGAATTGTTTACAACCCTCCTGga ttttttaatgaatatttAATGATGTTCCTGGAATGATTTTCCTTGACTAT GAAGACTTAATGAAAAGAGACGAGAAaaaacgaaattaaattctttttgt aaattttttaactCACTCAGCAAAGCTATACGATACCTGACACTGGTAAT TCGAGgatcaaaatccaaaaaattacaTGAGTTTTTATAACTTTCAAGTC ACCCTTAGGGTGTAGAAAAAACTATAAAGTGTCGTCAGTGATTTGCTTGG TGCGTCCCGCACAAAATATGCATTTCTATATCAGATTGTAttgtttataa aaaacgtgtttgGAAGTATTTCTGAGACAATTATTTCAAGGGTTTATCGA ATTTAATGTAATGAATCTGAAGGTGGCCTGTCGCAAAATTTTGCTGCTAT GACGATAAACATGACGAAATGGAAAAGGATTTTAACGGCTTAATCTtctc tttgaaaatttatttgtatttacctataaaaattgaaatgggGAAAAAAG CTGAAACAATATTTCGCAATAATTGAAATAATTCGTGTTTAATTAGCATT TTAGTGCAAAGATTTTTATATGGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071649TCONS_00071649Clytia hemisphaericatranscript
TCONS_00071650TCONS_00071650Clytia hemisphaericatranscript
TCONS_00071651TCONS_00071651Clytia hemisphaericatranscript
TCONS_00071652TCONS_00071652Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071652-proteinTCONS_00071652-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:412084..417209 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0 0 1.52 1.45 8.71 9.37 6.64 6.59 4.47 6.25 18.62 13.82 1.47 1.31 2.59 2.69 40.91 33.44 7.8 7.29 1.65 3.44 5.6 14.58 1.1 1.24 0.29 0.26