XLOC_044691 (gene) - C. hemisphaerica

Overview
NameXLOC_044691
Unique NameXLOC_044691
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_66:96451..100425+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044691 ID=XLOC_044691|Name=XLOC_044691|organism=Clytia hemisphaerica|type=gene|length=3975bp|location=Sequence derived from alignment at scaffold_66:96451..100425+ (Clytia hemisphaerica)
agatttcttataaaaaaaagctatCATTTATTTAGGATTGTCATAACGAA
CATAATTTTAATTGCAAATACACGGGAAATAAATTACTATTCCTTTTGTC
TCCCATTTTGCAATTAACGCATTTTTCCTATTGTGTTTTGAAACTACTTT
TTTAATATTCATATGAATGACGTATTTTTGGTTATAATTATGCTATAATG
AGCTGAATAGATCATTCATTACAACACATGCGGGATGGGTGGATGGAAAA
TGAACATTGGATGATGAAGTGGTTTGAAGCAGGAGAGCGTTTTGTGAGTG
AAAGATACATAATTTCTAATAGTGAGGTGAAGTTCTTTAAAAGGGAAAAC
TTTGCCGGGGGAGATGGGAAAAGTCACGAAATATTTGATATAGTGACGAA
GTATCAATTCAAAGGAAGTATCgacaaaaactttttgacgaaGATTGGGC
GAACATTTCCTCTTTTAGCTATACAGGTATAAACACGAAGATTAAGGGAA
AAGAAATTAGACTAGTGTATTCGAACCAATCAGGTTTTGTGTCTTCGCTA
GCTATTTACATCAGTGCTTTTGTCTCAATAATTTGATCTACCAGGGACCA
AATGCTTCGTACCCTAGAATTAACTTCACTTTCTGAGAgtttgaaattta
ttgaatgaataaagaaaacatttttattttaaaacataGTTTGAAATGTT
AAGCTGGATGATTTCGATTCATATCATGGCATATTCTCATACACTGTGTT
CCACTTTTTCAAGACAATCTGTAAATTCTATCGGAATGAGGGACGCAAAA
ggtgcatttaaaaaaattattattttcagaTTTGAATATAATTTACTGAC
AATccaaaaaaatgatgattttgtcTAGTGGAAAAACGATGCTGTAGCTT
CTGCACTGAAGTTTGATAGCTGTCATGCAATACCCcttaattttattcat
ttatttattttcaggactcaaaataaacaacaaaacaaaaaaacaacaac
aaactaaTACAATCATGAATACAATGATAATTCTTACCATTGCTACAATC
TTCGTGACCAAAACATTTGGTTGTGAGCTAACTCTTGGACAGGATTCTGC
ATTATGCCAAGCAATAGAAGCTGATGTTACCAAGGTATCCGCCCAAGGTG
CTACAGCTGTCAGTGGAGTTTGCAGTTGTGATGCTGACAAAGCCAAAGAT
GCCTGCGATGAACTACAAACACAAAAAAGTTCAGGAGAATATAAATTTGA
ACCAGTTTGTGAAAAGATCAAATTGGTCCTCCCTGATCTTATTAAGGCTG
CACTTGATTGCAACGATCAAGACGCACTCAAGAATTCTTACGCCAAAGTT
GCTCAATGTAATGCTGAAAATGCTGCATCATCTTCTTCAAATACAATGAT
GGTGATGGAAGCGTCTACAACTCAGATGCTTGATGCTTCATCAATGATGA
TCAAAGCCTCTTCATCAGCAAATGAAATGCCAGCAATGTCAACATCCATG
GATAATGCAATGATGTCATCAGCAATGGTTGAAAATATGAATTCAACAAT
GACAGATATGATGGCTTCAACCAGTAAAATGGAAATTTCAGCTTCGAGCT
CAATGGCCATGAATGGAACTAGTTCATCAGTTGTTCCAGGTGCTGCAAAT
TCAATCACATTCACACATTCTGTATTGGTGATCACAGCTCTGGTAGCAAT
GTTGGCTTCATTGATGTAAATATATGATTAAAAAACACTCTTATTCAGTG
ATCGATTCTTCTCTTAAATAATCTTTCAACgaattaaaagaacaaatttt
cgGACAATATTGGCCATTTAAATATGTTGTAGATTCTAGATAAAAAACGC
CATAAGATTGTAATAAAGACACAGACTCAGAATATTATTGCTGTGCAAGG
GCAACAGAGAAGTTTCAATTGGAGAAAATCTCTGGAAttaattttatctt
tttagaagacaaagttatttttaaatatttacatcataaattttgaaact
ttacaCAGAAAAATTATTGTAGacgtattttatattttaattttgaataa
aaacaaaattttctttgatcttaCAATTTTGTTATATGCTTGTGTATTTA
CTATAGTTTATAAAGTCCCAATTTTTATGATAGTCAATATTGCTACGAAG
CAATAAAAGCAGTAAAAGCAGTAAAACCATTGGATTTCTATTAACtatgg
ataaaatgaaaggTGGAATATATAATctctcttttttaatgatttagaCA
ACCCGTGTCATACAGACCCGGGTGGACCCAACAGAAAATTTACCCAAGAT
TCTCATTCAGGCATttaattttagccccactgagagattcccattgggat
ttcgatagaaacaTCCCCACTCTGAGAACAAGTTCCAACACGCGGATTTA
AGACAGGGTTTCAAAAGTCTATAGTGAAAAAAGCTATTTAGATTTTCATG
GTTATAATATTTGAGAGCTTAcgaatatttctttaaaaacgCCTTCTTTG
TATATTTGCATGATTGATTTGACAAATATTTCAATGATACACTCCTGTCT
GACAACCCTGGTATAATTTTTCATACAGCGgggataaattttttctttct
ggaAATCACAATGGaggtagaaattctattgttctcagctTTAAAAACCC
AGTGCGGGGATGATTTTGGAGCAAAAAGTTATACCCTTCATGGCTacaca
ttgaatttcgaatgggggtgaaatcaaagtcaatttcttatTGAGGGTTA
AAACTTCCAGAGGCGCGCGGGTGCAGCAGGCGTTTAATAATCGTACTAGA
ACATTTCTCCGGTTTAAAAAAGACAGAAAGGGGTAGGAATATAGCACAGC
TTCTTATCAAGTGTCCCTTTCTACCCAGCtgacacaacgtcgtttcagcg
ttcatctaacattaaatggacgttgtgtgtgccagctgggaacctTTGAT
AAGCACCAGTTAGAGTCGTTATGTAAAACTGATTTGAAATATACAGTCGA
CGCtctttaatttgattttcaagggcAATTTGATTTTCATCCAACAAGGA
AGCGTAAGAACAAGTAAAGTATTGTCTATAAGAGTtttttgttgacggtg
actttcaatattatcgaataccGGAGCGTATTGAATTAGTAAAACATCGA
ATTAAAGGCGCTAGCTGTAGTTCATAAAAGATTTCCCACTTGTAAAATTA
GGTATTTATTTTATGGTATCCTTTCAAATGGTCCCTTCCTAACCTTCCAT
AAACACCATTAAATGTATTCACTATACGAAACATGAAACAGTCATAAAGA
AAATGGCGACCAAAAACATTACAAATATTGATGTCCGATTTTTAGTGGCA
CCATTtttaattgatgacgtcattgctACTGTAGTTGAAGTAGATGGTGA
TATTACGTTTCCTTGTTCATCAAGTGTCTTTGTAACGGAATAAACAAAGG
ATGTTGTTTCCATGGTAACTGGACGTGTTCTGTTTCTATTACAAATTGTC
GTCAAGTCATATAAATTTTTCATAGAAGCCCAACTCTCACATGGTAAGCG
TGTAGTCACTATATTATCATCTTTCAAAACACTTTTCTTCATTTGAATAC
AAATTTGCGTGAAATCGTATTGTCCTGTCGAGTTTAAGAGCTCACAAACA
GATTTTCCTTTCAAGCAATTACATTCTGTCATATCTGGTTCATATCCTAA
TAGCAAATGAATTATATCCAATTTGATTTTATCGCAAACTTGGGTTATGT
TTAAAATACATCCTTCTTGTTGTTTCGATGTCGGCGTCGGTGACGGTATC
GTTGTCGTTATTGGCAAAAGTGACGGTGTCGGTATTAATGTTTGTGACGA
TATCAGTGTCGTTGAATGAGTTTTGGTTTCATACAGAATTGACATAAATA
CCACAATCCAAAATACCATTTTGGGTTTCATTTTTGTACCATAAGCTTTT
ATAAAATTAATACACTGCATTGGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071983TCONS_00071983Clytia hemisphaericatranscript
TCONS_00071984TCONS_00071984Clytia hemisphaericatranscript
TCONS_00071985TCONS_00071985Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071985-proteinTCONS_00071985-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_66supercontigscaffold_66:96451..100425 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25	0.17	0.07	0.01	3.44	1.85	5.44	5.89	6.52	24.94	6.29	25.23	298.71	213.44	186.7	188.79	49.08	102.42	116.46	198.65	4.4	3.92	6.42	7.25	14.3	11.12	345.3	339.83	13.05	10.76