XLOC_045107 (gene) - C. hemisphaerica

Overview
NameXLOC_045107
Unique NameXLOC_045107
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_81:40668..49531+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045107 ID=XLOC_045107|Name=XLOC_045107|organism=Clytia hemisphaerica|type=gene|length=8864bp|location=Sequence derived from alignment at scaffold_81:40668..49531+ (Clytia hemisphaerica)
ACGATTCACAAAGAAGTTTCTCAGAAAGTTTGGAAGATATCTCATGGCTC GATCTAAAGAGGGAGCTCCAGATGATGGGGAAATATGAACTCGTTGACCA TATCATAAACAAAACTTTGATTACTAAAGGTATTAATTGATTTTATAATT GATTCACAGTGGCGTATTTAGGAATTTTCGCAAGTAGGTCTAAAATTTGA AGCAGAGTTGTTTCAAGTCCGGTTTTTGGAAAGGCTATTTTCTTTGCATC TTACgtttatcatttttcatttcatcgctATCTGAGTTATTCTATACAAG ATTCCACTTTTGTTTAGACGTACTTTGTATCGCACTTGTACTTTGcaaat taaaaataagaaatttttttctcaacgaATACCCGTTTCACgttttgact acctttttacGCTAATTAACCGCTTATGGTAAGAAAATAGATACTATGGT GTATGGTCGCTCATAAGTGCCgagtaattttttattgaaaactcaaaaaa aaaaaatcataaaagaaaatagatttaattttacaatttaaattgacttt catttcaaaatcaatttaaaagtactttaatgggatgaactttcgcgggg attaaatttcgcggatttctcagatttgggtgtcatccgcgaaaatccgc taaattaaatcccaatggaaatttggaaagggcTCATCCacgaaatattt ttaatcaaaactcaaaatatgtcaaataaatactttttgaatggttactt gcatcataAAATAacgtgtatttcaacaaccaatatgcatgatttgacag tataaagatacaaaatcgtgaaaatattgccactcaatagtgccacccgc gaaactAAATCCCTgcgaaatttgaatttcgcggataggcccaaccgcga aatttaatccccgcgaaattttatcccatcaaagtaattaaatatttccc gttttccaaaagagaaatatttgttaaaacgggctttcttctaatctcat aaccgatcaccatattgctaaggcatatgatgatctgaaaagtttattca gcggaatttaaaaaaaacctcGTTTTCGGTGTCTGGGAAAAAACTATGAC ATGTGACCAGATACCGGTATCTGATTGGCCCGCATTTTTCAAGatatatt ctttattttatagGAAGCATTTTTTTGTATGGGTTAAGTAACAAAAACCT CTGTATCTtgtcaaatattgaaaattttctaaaaagtttttcagataatc ATAGGGTGCTCCAAGGTTCAGGTACCCCCAAAGAGTTTAGGTATCCCCAA TCATTTTGAtacccccaaaatttttagaattctaaagtaaccccccaact ttgagttacccccttttttttgctcttttgtcattcctgggAAAATACTT CCATGGTGGCAAGCacttctttttcaacaaattcaaggGTGTCATTTTGA CTATAATTTTCCAGAGATTTTTATATACCACAAACTTTCAAGGGTTTCTA AGGTTTTTAGCTGATCTTTGctagttttcaaagatttcaaggaaatctgt cgacaaaaggaattttcaatttttgtgtaaAGGAGGGCCCTTAAATTGcc tgataattgataattttacaaCCACCTATTCTATCACCCAGACCTGCCAA TCTCATACAATTCCAGTGGCACTTAACGGGTTAAAAGGTAAATCCCCTAA GAAAGAGCGTGGAGTATCCCCTTGAGTCTCAGGTTCCAAAAGTATGTTTT CTCATTTCTAAGTCACTGCGATGTTTGTATCCCATGCCATGGGATGTATT TCTGAAagttaaaatggctgaaaattgccacaaaatttggcatttcaagg gtttcaagggtatAAATCTTGCATTTCAAGGGTCCCCAAAATAATATTGA CTTTTCAAGGttgtttcaagggtttcaaggaattcaagggtgatgacttc atacaaaaacaacagcccccgcccccactaatgaaaatgcaggtaccccc aaacatatcaggtaccccctaaatttaagaatacttccaggtacctggct tttttaatacttatttttttaggtacccccaaatctCTGGGGGTGGATCC TATGATAATAACATGCAACTGTACATGGAACAATCTGACTCTTCACctga aaaaaatactaaattttTTGCTGCTGGAATGCCCTTTGAGCACATGAAAA TATCATGGCTACAAAACTgtaaaacaaaatcatttaatTTGGAGTTTTTA GACCTTTGCAAGCCAAAAAATACTTTCCAGAACTTAGAGTTGGTATTTGT TTATCTTCCAAAtctattaaaaagttctcatgaaAGGTTTTTGAAGTCTG ATTGTAAAAAGTATGCAACCCAAAAAACTGATCATCAAAACcgcttaaaa aagctcaacaaacATAAAATGTCACCAATATATTATCCAAAAAGAGTATC CAAATATCTAACAATACAAATAGAGCCTAAACTAATCAGCCTCTTCGTAT TTAAATCAATTATTTGTCGGTTGATGCTTGACAGACAGTTCACACACGTT AAGTTATAATTATATCGATAAAATGCTTCATTCCTCCTAATAATCAAGCA GATAGCAAAGAGAGAAGTAATCATTACATAAGAGAATATACCTGTAATAA TTTGGTTGGTGTTTGAGCCTTcatattgaacaaaaatgagaaaacatccA AGCAAAAGCGGTGTAAAAATACAACTTTCAAACCAGTCTTTCAAAGCTTT TAGGTCAATAAGTATGAGTATAAGTATATACTTTCTCAGCTCTTCCTTAA ACAGCActgacttcattttttttattttaaacaaacCTACCACTGGTAAT TAGATTGATATAGATTACCCGTCTGCTTTCAGGATTTCTGTGTCGTGGGA TAGATCTTCCCACGCTACCGAAAACCTGGACAGCATAATAGTACCAATCT CACCGACCTTGTCTACTTCCCAGAACTTCTTTAAATCCTCTTTCAAAGTG TCTCTACCACAATATTCCGTCAAACAACGCAATAGATGAGTTTACACTAA AGAACAATTTTGAACCGTTCCAAATTTTTTCCCCAATGAACCACTCAGCA CCCAACCAAGACAAGACTGACTAGCCACTGGACCACTACAGCATTTCTTA TACTTACCCGTGAAAAACTCATGATAAAAATCTGAACCGATCCATATTTC AACCTCCGCATGACCTTCATTCGAATCCACTAACGTCAAACCATCAAGAT GCTCAAAACTCCGACCTGCATAATCAACATCCTGCCTTGCGATGGGAATA CAAACAACAGGTACACAGAGTACTTTGCAATCTATGTATCCCTTTCCAAC TTTACGTTTCACTTTAAACCGAACcaccttcaatttttttacctttGCCT CTTCATTCCCAAATGTCTTGATTAGGACTTTCTCCGTTCGAACCGTTTTC AACTTCAATCTTTCAACCACATACTCAGAGGCGTAAGTCCTTTGACTACC AGTATCAAACAAAAGCCTTGTATCGGTAGAGGTAATCTCACTACAAACTG AAGCTTTGGCTGTTTGCAACAAGATACCTCCCTTTGCTTGAATATGGGAG CCAATGTTTTCCTCTATTTCATCcacttctttttatttttccttttcttt ttgctCATCCTACTTGCCAGGAGTTGCAAAACACAAACTAACATGATGTC TTCCTTTGCATTTCCGACATGCATAACTTGAGCTGCATTCCTTGGCAAGA TGATCAGGACTGGAACAAATAAAACACCTTCCTTTCCTAATTACAATACC TTTCTGCGCTCTTGGTTTTGTAATTGTTCGGCATTGAGAAGACGAATGTC CTTTACTGCAATACAAGCAACGTAATTGAGACTGACCCTGAATGTGCATA CCACTCGTCGTGTACGGTGAATGCCGAtccttttctttctttactCCCTC GCCACTAGTCTTCGGCACAATACAGTTTTCGTAGGCTCTAAGCTCTTCGC ATTAAAATGCTGCATCATACTATCCAAATTCCAACTTGTGGCCCAAATTT TCTAGAAATCGTCAACAAAAGGTCACCAGGAAGCCTTTCCTTTAAAATTG GAATCAGAAGACTTCCATAAGCTGCTGtctttattttcaaagcttTCAAA TTCCTGAGACAATTCTCAACATCATTATACAACTTTCTAAGATTCTTTAA GTCATCTCTACTCCTAACCTTGTTCATCTTTAACAATGCTTCCATATGTG CTGATATAAGAATCTGCTAATTTTCGTATCTGTCATTCAATATCTGGATA GCCTGTTGGTAATTCTCACTATTCAAAGACAAACCTGAGACCGATCTCAA AGCTTCGCCACTCAAGAATCTATTCAAGTAATTGAACCTATCACTATCTT TCAAACTTTCGTTTTCATGTATTGCAACATTGTACTGATCCCGAAATCCT TGCCAAACAAGAGGGTCTCCCTTGAAACTGGGAAGCTCCATCTTTGGCAA CCTGCATGTCTGTATGTTGCTGGTGGAAGCTATGGATGAGGCTGAGCTTG GGGGCAGGACTGTCTTTTAAAACCAATTCCTGCAATTTGATATCAATACT CGCCCCTAGGTCATTGGCTGACTGGACATAGGTAAAAGACTGAACGATGT CCTCGCTAATCTTATCTGCTTCTAAGCCTTTGAGAACATCCTCATTTGCT GCCTCCAGCTATTTTATGACTTCCTTCTCTTAAAACCAGCTAACCTAGAC TGTTGAATACCTTCCCCTGCAAGATAATCTTTATCTGAATCCACCGCTAA ATTCAAAACTAGCCTCAAACCCTCTCTTTTCAAATATACGCAAACCTCCT ATTATTCTAAATTATTAGAACAATGTACCCAACTGTGCTataacaataaa aattaaacgtgctgtaaaaaacttaaaaatttggAAAGCAGAATTGCTGT AAGAGAGAAAATAGGAGTTTGAGTGaaataaaatttcagaaaaatttaaa agaagaaatcgttaaatttttcaaaacgtcCTCTAGGAgaatagcgagca cctcactaaaaaccgggatttttcatctcgtttcttagtgagttccactt tgacgattttcgaaaaatagaagcctttcaagtgttttgacgcaaattcg atttttttctatactgcaggagcttcgaaagttaaaagtgacgtcaaaaa ttcgaatgtttagagcccgaaaacccgggctcaaaacattcgtacaagtc gcaaagtggaatagacgttaattgcgttaaaaaacgcgggtgacgtctaa tATAGGCTACTAGGAGAAAAGtcctcagaaaaaaaaactccatCACAAct ctaaaaaattttcaaatttcagtaACTGTCTTTACCGCTGACAGTAACCA CACTTTATTTGCTCAAAATATCATAGGGGAGATAAACTTGCCTAGATTAA CTCCAAAAACTTCTTACTGCTAAGAAGTCTCAAATTTCAAAGGAATagcc ccccggggggggggcagctgggcaaaaggaccgacgggtatgtgcgggtc ctaagggtaccttttatATAGCAAAGAAGAAGGATATcggtgtgaaaaaa aatttagatgaTACGTAAATTTGTGTATATACCGTGCTGCTCTTAGTTCA TTTTGTACAGTTGAACGACTCGAATGCTGACTTCTCTGATGTCCCTAATC TGGGCGCCAtgtaaaatctttttaactCTTAATAGTTCTGGATCATGAGT ATCAGTAAAAACGTAGAAACATTGAAGATTTTAGATATAAACTTTATACG TATTTCCGCTCCTGAATATACTTTTAGAATGAATATAAAAGCTATGTACT GTACGCAATCTAAAAATCGTGTTTAAGTCACGTGATTGCGCACGCGCCGT TTCTTTCCCCAGACTTCTCGCTACTTTCCACACATAGTGCTTTTAGCAAA ATAAGAAAGtgttaaaatctaaattttctttGCACTTAGATATTAGATCG TTCGTCTGATATACAGAGCTAATAACAgttgaaaatgaagttttcaaCAG GCTATCTCTTACTCCTTATTTCATCAACAATTCTTGCAGTTGAAATACCT TTCCTCACGAAATAGTcctaaaataaaatctaaaacttGTCGGTGACCGT ATTTCTAGTTTATCTTTTCCGTTATTCTGgtattttgggaaaaaatcgcc ggtatttcggtattcagTACCAtttgagccccccccccctcttcaAAAGT AAACTGGGTCGCTTCAGAAAATTTCAGCTCTGGAAACTGAGCTTCTCTCC ATAAAAACTGGGAATTCagtattgttttttattaaactTAAAGCTATCAC CCAATTTTttcagggaagaaattttcgcggaagttAATTTCAcaaatcag agtttcaaaatgacaaattttgcggaatttaatttcgcgaatgagccgat ttcaaaagtttcacggaatttaatttcgcgattgagaaatttcaaaagaa tttctttttttacagagaaaatgtttttcatatttttcatcgatttcaag ACATATTTCAGTTACGTTAACAAACTTTAACAAACTTTATcaacaaaata ataacatcaaatatGAATGTTTCTATGATAATGATTAAACTTCATCGCCA TATTTGTCTATAtctgataaaaaatacacgttacatgcttaaaaatcaat tgtgtccatccTTTTTGGTAACACCTGGTtaataacaacaaaataaaaca agaaaaaaaatcgaatttcacggaatttgatttcgcgatttagccatttt ggtgtgtttcgcggaatttaatttcgcgaattacgcccaatttcgcgaaa ttaaattctgcgaaaatttcttccgcgaaaatttcttcctagaGGGTATG TCTCTCAGCTCCATATTATCTCTAAATGAAAGGCGGCCAGAAATATAAGC AGTCATCGAAGGTCATTACACGTGAATTTTTACAGAAGTTGAGCTCAGTA ATAATATATGATCCCGATTTGCTAGGGCAGAAGAGGTCAAAAAGGGTATT TCTAAGTCACTCAGGCGGGACGATATGGGTCGGGCGGTATTAGATAGGTT TTcagattatcaaaataaaagctttcaaataacGAAAGGTTCACTGGCAA AAATTAGGGAGGTAAAACTGCGGAGATAAATGTTTAAGTCAAAGTTTTAC TAAGAGTAAAGAAAGCCTGTTtcacaatttttcatatttttcaatttctc ggaACTATGTCACTTGACCTACTTGACCTACCCTATATACGCCCCTGCTG ATTGATCGGtcaaattattgattgattgattgacattgattgattgattg attttttatattatcgacttgttgatttattgattgatctatcgattgat tgattgattgattgattgattgattgattgattgattgattgattgattg attgattgattgattgaatgtTGAAGGTTTTGAACACCATTTCATTTTAC AGGTCTTAAAGCTGCTTCTGACGGATTACGTAGACATTACAANTTCATTT TACAGGTCGTAAAGCTGCTTCTGACGGATTACATAGACATTACGTAAACG ATTTGATCCATTGTCTGGTGGAGCAACCCTTATCTCAAGCAGATGAAGAT ACCAATTCCGTGTTGCGAGAAGATGTGTTTATTGATCTGGTTGTGCTACC ATCTTCGACCGTCGACAAAGAATGGTCAAACTCCGATCGTGCTGCTTTAA TGGAACAGCAAAACATTCCTAAGACCTCAACAAAAAGGGCAGTCAACAAC ATCTTTTCTCAAAAAGACGAATTGGTCTTCGTGAGGGGGATTGGAGGTAT CGGGAAAACGACACTTCTTGAGATGCTGACTTATAAATGGGCGAAAGGAG AGCTTGATGCAGAAGTCAatattgactttgttttcaaatttacatGTCGT AATTTGAACacaatttcaagtcaatttacAAACGTCCAAAAACTTTTCGA ACTGAAGTATCCTGAAGTCATGAAATTGATTTCATTCGACGATCTGATGG AGATTTCTGAGAGGGTTTTGATAGTTATTAATGGATTCGACGAACTAAAA GACTTATATCTTCCAGAAAGCTCATCAGCTTCAAATAGAGACAGTCTTAA TCTAACCGTTTTCAACCTGATAAATCCTAAAGCAGATTGCCTCCCAAACC ATAAGGTCATCGCATGCGGACGACCAAAAGCTGTCGAATTTCtgaagaaa gaaattcctatcAATTCCAATCGAAAGAACATTGAAGTTTGTGGGTTTGA CGATGAGAACATCTTGAAATATATTCAGAACTTTTTCGGTGAACGTAAAG ACAAAGCATTTTCTGTCCATCAACTTATCGAACGATCATACAATTTACGC ATAATGGCGCGTGTTCCAGTCTTTTTATCCGTAATCTGTACAGTTTTCGA GGaagatttgataaaaaatcccATTAACACACAAACTGAACTTTACTTCT TCACAACACTCATTTTCATTAGAAACTATCTCAAAAGACAATCGCAGTCT TACACAAACTTGATGGATATTACCAAAGATAAAACCGTCGCTGAAATATT GTTATGTTTAATGAAACTATCTGTCACAACGTATATGCAAAACAAGGTGG TCTTTAGTGAAGCAGAAATCGCATCGTTGAGGTGTCCGATACCGCTCGAG GAAACCGGCTTTATTACAAAGCACCAGAGATCAAATTCTACGGAAGTGAC TTTTCAATTCCGTCACTTAATACTCCATGAGTATTTGACAGGATTGTATA TCTCAATCACAAAAGATATCACACCATTTTTTGGGAATAAAGAATTATCG AGTTGCAAACCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072663TCONS_00072663Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072663-proteinTCONS_00072663-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_81supercontigscaffold_81:40668..49531 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.08 0.04 0.04 0.58 0.87 2.58 3.3 1.79 2.62 3.19 2.35 7.31 5.46 9.23 8.76 6.56 5.3 11.86 10.97 3.42 2.12 1.32 1.59 4.53 3.6 3.84 3.76 2.93 2.45