XLOC_045248 (gene) - C. hemisphaerica

Overview
NameXLOC_045248
Unique NameXLOC_045248
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1043605..1053205+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045248 ID=XLOC_045248|Name=XLOC_045248|organism=Clytia hemisphaerica|type=gene|length=9601bp|location=Sequence derived from alignment at scaffold_86:1043605..1053205+ (Clytia hemisphaerica)
AGATTTTATGAGACACATAATAATTTGATAACAAATATTTGATTATTTga aataatataatattataATAATGGATGATTTGATGTATCTGGAACGCCTA AAAGCAGGTCAACAAAAGGTAAGGCTGTTTTCAATTTAAATTCTTATTGT AGAATTCCATTAATACTCATTTGAAACCTCTCGTAACGACTTCAGTTAAT GCTGATATCACTTTCTTTCTTATCTGAACAGATTTtctccccccccccta gtaATCAATACTAAAAGGTCGACATAATGATCAGTTTCCCAAAAAATTGA TATCATTTAGGTAGATGGATTTTAAAAAGTAAAGTTTAACTATTTTCCTg agtttctacaaaaccttgaaaacctttaaTCATAACATTTCTGAGAAAAA ACTTGCAAGTCATTTAATAAACCTTGAAAAgcatgatttttaaattttat atattttattataGTTTTGGCTTATCTGAGGCTTTGAAATGTCTTTTTGT TTTATCTGAGGTTACGATTGCATGGATTCAATTTTGGACTTTTCGTACCT CCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtgtattttgaccagttatgtcttatgtgtttcat tgtttcaatgttcactgattagtttgataaccaggtaggtccataaaagt atcgcttgtttctGTTACATTGCTAAAAAGAACCTTTAAAAATCCACTAG GATTTTATTTggttaaaaacattgaaaacgtTTTAAGGGTCGTAGTCTTA AGGGTAGGGACTATATTTGCCTGATAGATTTTAGTAGCTGATTGTAGCTG TATGCTATGATTATAGCATTTAGAGTGTTTTAATTAGAGACTGAATCCTT GAGTGTTTGGGGAGCCCCTtctttctaaataaattttagtTGGTGGACTA GTTGAcaattaattatttttattttagtttctcGAAGATAACTTGCAAAG GCAAGGAATAAGGTAACAAAAACTGTTCTCtacatttttttcattggaCA GCATTTTTTTGAATGGTTTTATATAGTCATATATGGTATTACAGgctttt ttacaagaatatgGTGTGTTTTTCCACTTCATCATTATCATGATAATCTC AAcattttaaagataattttCCAACGTTGGAAAACACATGGAATTTAGAG TATATAATATGTagacaaagtaaaaaaaattaatgtctgattagtccaaa tattttgttgtgtaaagtttttcaattctttcaaGTTACTCACAGCAAGC tactcttttgaaaatgtaTAACATTGGGGAATTTCTTACAATTTTATAGG AAAAATCTTGTGGAAGATTACAGCAAGCTAATTAAAAGATTGAAAACACT TCCTGATACTACAACGCAGTCTACTATGGTTGgttaaaaatgtctttttt tttctttttcacatttttctaaaaaaaaagtcatttgaaGGAGTCTGTAC TCCTGGAAAGAAGTGGTCTATAATGCATAAACTCCCATATTATGTCTTCT TCGATGAGTTGTATAAAAAAGAGCACATTAAAATTGACTGACCTTGTCGT TATATATGAAATACTTACTACTTGAATACTTTTTCAGAATATCATTAAAA TATTCATTGctgatattttgttttgttcaaaCTTTCAGGTGCCAGTTGGA GACATTGCATTTTTACCCGGAAATATTGTCCACACCAACGAAATTATGGT GTTACTCGGTGACAACTGGTTTGTAGAGCGATCAGCCAAACAAGCATCAG AAATTGCTGACAGAAGACTTAAAAGTAAGAAATGTTTTATTAAACTGTTT TGTTTGTGTCTTCTCGCTAGCGATtttaaatacaaataaaaaatagttCA TTTGACGTTCATTGAACGTTCAATAATTGCCTGGAGCCTTCCAGAATATT TCCTTCTTTTTTCAAGAGATTGGTCCCCAAAAAGAACTACATTGCCAttg gtattcatgatatgcaccattgcaatgtcttcaacggacctaaaagctga ttggttttacgtcacttatacaaccaatcagctattgggtccNNNNNNNN NNNNNNNNNNTGGAATTTTAccgattttcagtatttccctaaatctatgc tttagatttaagcatcccctcaagcatttttcagccttattaagctttcg atcTAAGCAtttctgagcctgttttcggatttttgtatgcttataaaaaa aaaaacatgtattttcaGTGGTTGAAAAACAGTTGGATGATTTGGTGAAA GAACATGAGCACATCAAAAGCAACTTGACGTATGCTGATCAATTCTCAAT GGTATGCCTTTGCATTACATATCTTTCTTTGCGTTCTGTTTATATAACAT AACCTGTTGGCTCTggattaaaaactgtttttaaaCTTTCTAGATCAATT GACTCTGCTCTTGTCTAGAAACAGTGTGAATATTCTATAGCTTACTTTTG TAAGTTTACATTTTTGTTTCGTCAAACTCGGGTTGGCTCTGTCAAGTTTT TTGAAGGCTTAAATTGTTGCTTCAAGAgagttttataaaaagaaaaaaga aaaacaaaaagcatACCTTTTCTGCAATTGGAAAGcgttttaaatattat attgctgcTTATAGCTTTTTAAACATAATTTTGGTTGCTTCACATTTGTA GGACAATGAAACAAAGGAGATCAAAGAGACAGTACCGGAAGATTACCAAT CTACTAAAGGTAGGTTTCGTACATGTTGTCTAGTTCAATCATcccatttc aaaatttgttcattttgattttaaagaaaGAATAAAGGAAAACAATTCAT TTCGCTACAATTGATTACAGTAGTAGAAATGACTTATTCATAAGACACTA GAAATGGCTGTTCGTTTAATTCCTTTTATGTAGTTTAAAATATCCTAATC tataattcttttaaaattcaattttgggtcaaagtaggaaaaaattaaga aaaaagtttacgAACCCCTACAATTGCAGAGTATTTAAGGCCCCATGCAG TTGTTGACATGTTTTAACCATCCGAAATCATTACTACATTGAAAGAAGAA TCCCTTCCCTAATGAATTGTTAATGACTTGGGATTTCTTGTTTTTCCTTC CTGATTTATTTCCTGCTTCTATGAGAaggaaattctaaaaaaaaaaacag gtatCTTACCATGTTGTTTTTGAGGACGAGATTTGTTTTctagatagatg tttttttaagTCGAGCATTTTAAATCGAATCGGAAAGGGTAAGAGGAAGT TATGGCGGATCTTGAAAAGTTTGAATGAAGTTAATTTCATATTGTCCTTG TTTGCCATAGATCTATCTTATTTCTGAACACAATCCAACTATTCCTAATA ATGCACTTGCCACAGGGGgcgggggtcatgcagttactaTGTGAACACTG TGGCACTGAGTACGTGGTGGTGTAAcaactaaaaaaatttaaacagttac tccaaagtgcacattttttcacttttttgaaaaatttccctaaatttttg tcaaaaatttgaaattgttcgaagaaaaattgaattgtttttggaaaaat atctgaaatttttccatgaaaataaattttttgtcatACTTATGAAAATA GAGATCGTGGAATGCTTTGATAGTGACTTAAACCAAGTATATAAACTTAT TCCAACAATTCttttaaatacaaaaatcaaaaaaaaaatttgaccagTGG ATATGTCTTATAATTATATCTAAAAAAGCCTCAAATTACCCATTTTATGG GGTGGTGTACCCCTTTTTGAGCACtaaaaacagttactccacagTGGAGT AAGTAATGTTGGTGGTGGTGTGAcaagaaatttgccaaaatgaCAGCAGT AACTCATCATAGTGTCACGgagtaactgcatgaccccccctgcTTTCCAG TATAAACTAGAGTCCCCCTGTTTCCTCTCAAAGAGCGAGAACTCGGCCAA TTCACCATGCATCGTTACTCCCTCCTCAATATCATTATATCAAGAATTAC TACATTAAACTTACTGGTTTCTATAAACTATCTTAAGAAAATACACATTC CCTAAATATTATTTACAGcttgtttttttaaaaatcCAACGTGTCTTTTA CAGTCAATTTACAGTATTGTGCGCATTCTTTGCGCTTATAAGTTCTGCTT CAAGTTCCTAAGAAGCGCGCCTCTCCTTTCTATAACATAGACAAAAATAT CTTTAAGGGTTTGCTTTATGACGCGCTACCAAATTTTTCCTCCTTTCGAG ATGAAGTTTTAAATTTCATAATGTTTATCTCGGTTAATTGACtgcaaaat actttttttcttaAAGGGAAACGAAAGATTGCTCACAAGGCAAAACACAA CGTTGTTCCAAGAGCAGTGTCCTTTAAAAACACCGACGCGGCAATCAAAA GCCTCGGGAAAGATTTGATGACGAAAAAAGATTCGGTGACCGGACAATCA TCGACCGACCAAACAATCGATCACGAAGAATTAATGTCTCGTTTAAACGA ACTTGAACGAGAAGAACAGGAAGCCGAGCAACGGGAACACGACAAAATCA TGGAAAGTATAATGGAAGGCTCGTATGTACCACCGAACGCAACCGACGAT AATCCTCGTAAATCCTCGGTAACAAACGGCGCTAAAAGACAACCTCGAAG ACACGTAAAATTTCATAATCTGGAGAACGAGCCCTTGTCGAGTGAAGACG AAGAAGAGAGGTTGATTCGTTTCGACCATACCAACCTACCACcagtaaaa atctttttcttttgttgttgtaaTTTTTACGTTCTATATAGAGCTTGCAC TTTCGAAAACTTTACAAACAGCAACAATGAAAATGTGGAGTTtattttat gtttcaaaaaaatgttttggcgTGCGAGATTGAAGATCTCTTGAGAATTG AATGGATCTGAGATCTAATACATTTCGAAATgttaaaagatttagaaaaa ttcaatttttcttttcttcatagCTGGAAAGATCATTGAGTGATTCGGAC CTCGCAAAAGAAAGCACTATCAAAACACCAGCTGATATTTACGAACAGTT CTACTGTGGAAGTGCTCACCTCTCCGACTCTGACGACTCCAAACCACTCA AATCAATCCTGAAGAAAGATAGTCGATCGGGCTCCTCTGAGAATCTACGC TTAAAACCGATTTTGAAATCGTCTCCAGAACACAGGCCTGGAACACCTGA TAATCTCCAAGACGAGCCTCAGTCCATTCTCAAAACACCTCCCGATACTC AGGCTAGTGACAAACGGCCAGGCACTCCGGAACACGTCTTGGACGGGCCG TCTCCGACCCCTCAATCAATCTTAAAACCAGGAGGATTTACTAAAGAAGA AATCCCAATGGTCGAAGATATAGATCCATCTGACTCCTCCGAAATCAGAC CTATCCTCAAAAGCCACGAGACACCGCTATTCATTCCACCCACGGCCACT ATTCCGACCTACGGTGATGATAGTCAGCCGCCTTCAAGACCTTCGATCCT GAAACATTCCACAAATGCTGATAATAGTAATCCGAACACGAGATCTTTCA GCCCTGAAGCAGCAATGGCTGGAGATTCAAACAGTATTTGGAGAAACGAT TCGAATTCACCAGCTCGTTCTGCTCGAATTGTGTCACAAGAACCTCAACA TCCCAATACTTCTGCCAATGAGTCGTTTGGCGAACCAAGGCCTATCCTAA AGGCTCAGCCACAGCACAACCCACAAAGTAAAATGGTAAGcgttttgctt tttttagtCTTGACACTTTTTGGGCATTCGGAAACAATTTaaaaccattt gaaaccattgtgaaaaattattaaacGTTGTTTTTCAAATCCATAGTTGA TATTTCAGGAAGAATCATAACATGAATAATATAGTAAAAATGTTACATGG CATAAGGAGTCTGTCAAAACTAAAGCTTCACAAAGGCTTTCAATTGAATA TCAAGCGAGGGATTGTTTTCAAATATTCTTCTAATCATTACTTTAGATCA TCGTCATCTTGCTCTAACGCTCTAGCGATGAATTCCTCNTCTAATCTATA CTTTAGATCATCGTCATCTTGCTCTCACGCTCTAGCGATGAATTCCTTTG ATTGTAACACCTCTAATAATGATATCCACTTTTCCTTAAGGCTTTCTCTG GTACCATTGTTGAAAGAGACACTGCTGAAGCAACTTCTACAACGTCCCGA CAAAATAAAGTATGTGTTAATTCTTTGCAAAAATAAGTGTTTGGTTACTT ACACTTAAGGCTAATGGATGAGCCTTATCTCTCTAAGTTTAATAGAAATT AGGTAAATTACATCTAGGGGTAGACCTATAATTTTACCATCTAACTCGTA TAAAGACTCCTTCTTGCCGAACGTAGGTCCTTGCCTATATGTTGTTTGTT AGCCATTTTTTAAacacacttttttttctttcttgcaGCCTTCCAGTAAC AAACCAATGTCGAAATTCAAAGCCTCAAGAATGAAGAAATGAGCTCAAAA AAGTTGATAGCGATCGTACACGAATGTGTAGAGGGGAAGGTGaagaatgt tttgaaatatttacaggCTTAGATCCTGGAAGCAGACGAGGTATCACAAT ATCTTTACTTTAGATGTATTctgtttgatttttgaaaatcttaagTTATT ATTGTGTaaatgttattattttgttgATGGCATTCAACGAAATGTAGCAA TGCTGTTCTTGCTTACAAACTTTACCGAGATTCTATGTGGAGATGAAAAT GGCGTCTCGGAATCTTAGGAATTCCGTAAAGGCACTCGAAAGCATGATTG AGTCAAGTGGCTGCTCTGGTCTGCCGGCTGTATTTTGCTGCTGTGCTGTT TAAAGTTATAGTTTTGTTACAAATGGAGATTAATTTGTCAAATCGAAAAG TTTGTTACAAAAGCGCAAGTTAAAAGCATTACAATGatgaaataaaacat tttacaaaaCGTGGAAAACAAAATGTACAATACTGCTGTTTTGTTCATTG TTCAGAGACAAATGAAATTCTGCTTTCTTGTCTATCGCAACATTAAAGTC CCAAAAATTTGAGTACTGGGTTTAATTCCAAACAATGATGTTGTCAAAAA TGCATTTCTGTGGTTGAATGTATGATTTTTGTTCATTTGGAGTTGGAAAA AAGACTACTTTTTCATTCAAGCTTTAACGCTGGCTTTTTGCCCCttattt ttttacataaatTTTTACGCAGATTTATACCCAAAACTTATcaagatttg taaaaaaatattatcatttACAGCAGTGTTAATAAAAACTGAAAgctctt ttgttaaaaaaggaTTCTGGGTTCAATAAAGGGCATTTTTTGACCTACCC C
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072936TCONS_00072936Clytia hemisphaericatranscript
TCONS_00072937TCONS_00072937Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072936-proteinTCONS_00072936-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1043605..1053205 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.09 50.41 24.1 19.53 21.04 15.13 11.05 11.35 5.9 8.92 6.21 4.69 6.46 7.62 6.76 7.09 10.61 9.31 3.7 3.42 7.53 8.34 34.51 30.25 7.98 10.81 3.23 3.07 23.56 29