XLOC_045296 (gene) - C. hemisphaerica

Overview
NameXLOC_045296
Unique NameXLOC_045296
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1146959..1155854-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045296 ID=XLOC_045296|Name=XLOC_045296|organism=Clytia hemisphaerica|type=gene|length=8896bp|location=Sequence derived from alignment at scaffold_86:1146959..1155854- (Clytia hemisphaerica)
TTTGGCGGATTTGACTGAAATCCGCCAAATTAAGTTCCCGCCAAAATTTC TTTTTTCCGCCATCCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCG TCCATCGGCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGGCCATCCGC CAAATTAAATTCCCGCCAAATTAAACATTTTGAAAATATGATCTCTTTTA AGGTGTTTTTGCTTTTTTTGCTGTTTTGACGCCATTTTAAGGTTAAATTT TTAAGCGACCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCGTCCAT CGGCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGGCCATCCGCCAAAT TAAATTCCCGCCAAAATTTCTTCCTTTAAGGTATATAATAAAAAAACTTA CTTCTCAGTTTCCAAGCAATACAACTAAATTAGGAGGGATGTATATTTTC GCACGCTCTGTAAGAAAGTTGGTTGCCAACCCTGCTAAGTTGACACAAGC TGCTCTCAACACGTTGGCAAAGAGGAATGCTAGGAGTTATGCAAGATCAA GGATAATTGAGCAACAAAAAGTCAAAACAGGAGCCGGAGGTTTTAGAGGT GTGTAAAAAAATTACTGTTTTAATTTTTTTGGTTCTGTACTGTACCAGGG CCTGAAATAATGATCCTGCATTGGACATTGTCTGACCCAAATAGCTTCTT GTCCTACCCAAAAATCATAATTTTCAAGCTAAAGCAACTCTAATTACCCA CTTAAAATCGTTATTTCAAACCTTGTGTATTTTGTAATGTTTATCCTGTT ACACTACAGTACCTCTTAAAGAAAGTTAATGATTAAAACTTTTAGCATTT TAAGAATGAAATTTGAAAAAACCTGACCTCCTTCTCGTTTCAGCTGAGAA AATTGGTCAAGCAGTTTTAGGTGGATCTGCAGCTGCTGGTATTGGTGCAT TGTGTTTTTATGGTCTTGGTCTATCCAATGATGTTGGTGCTATTGATAAA GCAAGGTTAGCTGCAGCACTAATAACTTTTTCTTTAAAACAAACCTTAAA AGAAAAGCCTGGGAAGTTTATCGGACAAGCAGTGGTATTCTTCGGTCTTA ACAAATCTGATGAAACCGTTTCCGACACTTTTATTTCTAATGATTCGTAT CTTCTTAGAATGTTGAATCTATGAATTCCTAAGACTCCGTTACTACTCCA TCATGTATTTATTGTATTATGTACATACTGTAATATTAAAAACATTTAAT TTTGAATTTTGTTTAGTCAAAGTAATCCATTTTTCTCAACGTTATTTTTC CTTGATAGTAAGTGTCTTAACTGAAACCAACTATGGTTTAAATAAAAGTA TATTATAAAAAGTGCTTGATAATTGCCTGATAATCGTAACCTTTTTTAAT TCTATGATAGATTTTGGCCACCTGAGATGCGTTCAATGATCAAATCGACC TATTTGTATTTTCTTGGAAGTTTGAGTATAACTGCTGGGTCAGCATATTA TTTGCATCGATCAGCACTTGTCACTCGTATGATGTCTGGAAATCCTTGGG TTGTAAGTTCAATTTCTCCGTTCTGCTGTTTGTTTTTTCTAATTTCTCAA GATCGAAGAAATTTTGTCGACTACTCTAAGGTTCCAAACAAACGGCCCCC CGCTTATTAATTTTTCGAAAATTTTTCGAGAAGGTCCCTTATTCTGCCCT AAATATCCCGATTTTAGCCTATATTTACCTTATTTTCGGGTTTTTCGTAA TTACAATTTCCAACCTCCGGCAATTAGGTCCATCTCATTTATTAAAATTT TGAAAATTTTCCAACCCCTCTCCGTTTATTCGAACCCCCCGTTTATTTGG AACCTAAGAGTATTGATCGAATCAAACAAATCATTTTCACAGAAGCAAAT AATCTAAATAATCTCATCGTTAAGATGTGTTGTTATAGAATGTCTTGATT CCAAAAATCTTATTGGGGGGATCTATTTTGAAGGTGGAAGCATAGTTGAT TGGGAGTTTTAATAATGTGGTTGGAATTATAATTTTTGGTGGAACCTTTA CCCCTCTTGCATACTTTGTACTTATTGGCACATTATCCCCGTCTTTATTT CAGGTTTTTGCAGGTAGCATGGCAGCCTTGATCGGAAGTTCTATGGCTTG TCGATCCATTGAATATGAAGCAGGATTGAATGCAAAACATTTAGCTTGGG GAGGTTTGTTGAATTTGATTCCTTATTTCTTTTTCAAAAGATCTCTCAAG AAGAAATATTTTTTAAAGAACATTCTTGAATCTAAACCTGTTGAAATTAG AAATTAAAAAATGTTTATCTTTGAGTTTCCAAAGATTTTCAATTACAATC GAACGATTCTTATCTAGGTAGGTAGATTTCACCTTGAATTTTTTTTTTAA AAGGAAACTTAATCGTCTGAAACATTTTTCTTGGGGTATATATAATTAAA GTTTGCGAAAAATCACTTTTTTAAGAAACTTTGTCACAACATCCTTGGAG TTGACCAGAACGGGGGAACTTCATTACTTACATTACTTCATTGCCTAATA TAAGAAATTTCGTGACTATTCCCGAAAAGTAGTAAGTCATCCATTTGCTA AATCGGCCCTACAGTACTTTCTGTAATTCTATTCTAAAATATTAATCCCA ATCTTTCATTAACTCTAAGAATATTCGCGGTTCTTTGAAGATCGAATTAG AAAGAGTTAACTTGAAATTGATATTTCTTTTTTTTTTTACAATTTTTAGT CCACAGTGGCGTTGTTGGGCTTGTCGTTGCACCCTTGATGTTCTTGGGCG GACCACTCATCTTGCGAGCCGCCACATACACCGCCGGAACCGTAGCGGCG CTTTCACTGACGGCTGCATGTGCACCCGATGAGAAATTCTTATCATGGGG CGGACCATTGTCATTGGGACTGGGTGGAATTTGCGTTGCTTCATTGGGTA AGTCAAGTTTATAGAGTTTCTTATTCGAAAAAATAAATATTTTAGAGACC TCGAAATGGAGGATTACAATCTATTGCTCTCCAAATGCTAAAGTTGGTAT CAATAAAAATTCAAAATTCAAAAAAGATTTCCTTGATTTCTTAGTCAAGG GATAGGTTCAGAAATTGCTTAAAACATTCTACCGCCAGGTCTCATACAAA GAGTTCAGCATGGGTAAACCTAAAATAAAAGAAACAAAAAACTTGATACC TTAATGGTAATAAATTTCGCGTGTTACAATCGCGAAATTTTTTTCAGGAA ACGTGTTTCACATGTATTGAATTTCGCGATTCACTAAATTGGGCATTTTC AAAAAGTGGGAATAAAGAAAGAAAATGGCTGATTTCGCTTGAAACACAAC GTATTGGGTGTAAACATATTAAAAAAGTAACTAAGTGTAACAAAAAAATT CGCGATTTTTGGTCTATTTTGAAATTTTTTCACGTGTATTTAATTTTGTG ATTTTGAAAAATTTAAACGGTATTAAATTTCGCGAAATGTGACCTAAAAA ATCGCGAAATTAAGTACCCGCGAAATTTGTAACACGCGAAATTTAATACC ATTAAGGTAAACCTGTTAAAGGGAACCTTTACTTGACTAAGATACTTACA TTCGAAACTTACAAACGACCCCATCTACTTTCTTAACCAATCAGATGAAA AAGTCAAATTTAATTTTTGAAAACGGTTTCAAATGTCTTGTTTGTAGAGT TTTGTATTGACAATTGACGCCATTATGAAATGCTCCAAAAGGGTTCAAAA TTCTTTAAGGTGGTTCTAGGACCCATATAAGAAACCTGTGTACCGAATTT CAGCCAAATTATTTTTGAAAGGTAAAATCTAACTTGGATCCAAAAAGTGA GTAAATCACCCGGATGTGAAAAGTTAATTTCACACCTTGGAGCGTGAATG ATTTTCCTGCCCCTTTGAATTTCTTTCACGCTCTAAGGTGTGAAATGCAC TTTTCATACCCAGATGATTCATCCATATTTTGTCACCATTTTCCAGGTGG TATGTTTTTGCCAGCCACTTCGGCAGCAGTACCGGTCATCCAATCTTTGG TGACGTACGGTGGTCTTGTTGTCTTTGGAGGATTCATGTTGTACGATACA CAGAAGATCATCAAGAAGGCTGAACTTGCCACGTACAGTGGAAAGAAATA TGATCCTATCAATGCGTAAGTTTATCGTTGGTCGTAAAAAGCCTTCTTTA TACATGACTGTCTTTATGACATTGTACTTTTCGATATCTAATTAAAGGTA CTGTTGTGCGCAGATTTGTAATACTTTCTGCGCAGATTTGTAATACCTGC GCAGATTTGTAATAAACTTTGCGCAAATTTGTAATACTTGAGCTGCGCAG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTGCGCAGAAAT GTAATACTTCTCTGCGCAGATTTGTAATTTGGAATTGATATTTTCATTGG TAACCAAATTCTATTCTGCGAACAAAATGCATTAAAAATGACTTAGAAAA TAATACCCAAATAAAGTTGTGATTATTGAGCACACCGAATAAATAATCAA TCAATATTTCTTTTCTAAGCAGTGCTTTTATAAGAAATTTATCTGTTAAT ATAAAAATTGTTTATGAGAATAGCGTGGACATAATTTTTATAAGAACTGC TTTTATAAGAAACTAATCAATAACTCGTAAAATAAAAATTATTTGTTGTC GGTAATTGTTTATTTCGAAGTAAACAAGGTACGAAGAATAACATGAACAT ATTTATTTTTTATAAGCACTGCTTTTATAAGAAACTAATTTCCTTTAGAT CAAAAGATATTGATTAGTTTCTTATAAAGTTGATACTTATAAGAAAAATG AAAATACTTAAAATAAGCAAAATCCCATATTTGTATTGAAAGAACCAAGC GCCGAAAGCCAATTTCCATTAGATTAAAAGATATTGATTCGTTTCTTATA AAGTTGATTCTTATAAGGAAAATGAAAATATTAAAATTATTCCCAATCCC ATGTTTGTATTGAAAGAACCAACTGCCAAAAGCCAATTTCCATTAGATTA AAATATATTGATTCGTTTCTTATAAAGTTGATACTTATAAGAAAAATGAA AATATTAAAATTATTCCCAATCCCATGTTTGTATTGAAAGAACCAACTGC CAAAAGCTTATTTTCATTAGATTAAAATATATTGATTCAATTCTTATAAA GTTAATGTTCATACAAAAGATCTACAACCTTTGTGTTTTTTTCTGATTAT TTTCTAAGTCTTTTTTTCGAAACTTTTCTTCGTGGAAAACATATGCCCTC GAAGTAAAAATCTAAATTCCAAATTGCAAATCTGCGCAGAGAAGTATTAC ATTTCTGCGCAGCTCAAGTATTACAAATTTGCGCAAAGTTTATTACAAAT CTGCGCAGGTATTACAAATCTGCGCAGAAAGTATTACAAATTTGCGCAGG TATTACAAATCTGCGCAAGTATTACAAATCTGCGCACAACAGGTACACAG AAGACCTCTTAAATAGCTGGAGTAGTCTTTGAAAAGCTAACCAATTATTA ATGACATTCTCAAAAACCAGTCCTTTTTTCCATTCCTGGGACTGGATTAA GGTCTCATTTGTTAAAAGTCTATGAAATGGGATCGTAACCATAATACTGT AATTGGTGGAAAATAAGGACCTCGAAAAAATTTGATAAGGTGGGGAGCTG GAGTTAATTTGGAGTACACTCTTTTTTTTATTAGCATATGGAAAAATCCG TTCGAGGCTCAATATGCTTAGCAAAGTTTAATTTATGCTTTATTTTATGT GCTTAGACTTCGATTTGTTAGTTTCTCTGGGTTCATGAAAATTTCGAACT ATAAGTCTGCACATTGATCGGTTCAAAGAATGAAAGTTATCTTTGTAATT TGGAGCAGCAGGCGAAAATCTTTGGTCTAAGAAAGTTTAAACAGCTTTAA AAGTAACCCTAAAAAGGTCAGCGTTTTAGAAAAGCAGCACGAATTTTTTT GCATATCAGCTTGGAGGTATGCTTAGCATTATGCTTTTTTTACCGAATTT GACCCCTAGTGTGCTTATAAAACGTTATGCTTATTAAAAAAGAGTGTATC CAAATTGGAATGTTTCCGAAAAATTGAATGACCGTTGCGTATGGTCATTT TTCTCAACATTTCAGATCGATCGGTATTTATATGGATACTATCAACATTT TCATTCGAATTGCTATGATTATGGCTGGAAATAACCGTCGAAAGTAAAAA AGAAGAAGTTTGTTGGTAGATTTTTGAAGAACTTGAAAAATGAAAGTGGT GTTAGTTAACGTTATGAAAGAAGGAGGTTGTATGATGTCAATTTGTTTAT ATTTTTGGTTAAACAGAACATTATGATCCATAATAGCAGCAGGCAATAGT TGACAATACATCGTTTCGACCGTAGTCGCGTGCCACTTAATTATTTGATT ATCCCCCTTAATCGACCGAATCCTTTTTTGACACATTTTACTATTGTCTA TAGGGGCAAAAAAAAGGCTGGTACGGGCAAAAAAAACCCTGCGCGGCAAT TGGCGGCGGCTACAGTCGAAAAGGTGTATTATTAATCATGTGTTTCAAGC CGAAGGCTAGAGGCGAATCTTCAACCTTTTTTTTAAACAAGAAAAAGTGA AAGCCTTAAGGTCTGCGCTGCGTTTCGGAATACAGATTGAATCTACAATC AGTTCCAAAATACTTGGCACAAAAGGGAAATTCCCCACGAAATTTTATAA CCACAAACGATTTGTAAGTGCTCCAAATTAGGTTGGAAAGGTAGAGTTTT AACTCTTGAGTTTTAACGCCAGACCTTAGGATCTGAGGATCCAAAAGTTC AAAAATGGTCCGGTAGGGCTTGAAATATAGCCTAGAAACCAATAAATCCC TCCCAGATCGAAATATTCGATGAAATCAAGTTGAAGGCCCGAAATTGACA ATCTCGCTCGAACTTCAATTTTTGTAAAATGGTAAAATAGCCAAAATTGC CAATATGTTATGGCACTGATTGTAGCATTTCCTTTGCGTTGGCGTTTTTT ATTTTTCAAATTGTTGCGGTGAATGTAATACTTTTGATTCAGCGTTTGTA TGAAAACCATGCGGGCCGTGCAACTTATGTAGGAAATAAGTGGCTTCAAA TCCTACAAAGGAGATTCAACTCTGTAGTCTTCCGCTAAACCGTATTGCTA TTAGCTTCTTAAGTAACCTGAAGTTGTAAAAAAACCTGGATCAACTTGAA CCCATTCTCCTTATAATGTATATAAGACATACATTGTATGTAGACATTCA TCAAAATTAAAAATTCAAATTCCAACATTTCCGAAGGCTTTACTTAGGAA GTCCTTTAAAATGGAGTAATATTTGCATACAAATGCGAACTTATAAACGT CATAACAGAGAATATTTATAAATTTGAAATTTTATAATATTGCAAAATTA ATTTTTTTTTAAAGAAGAACAATGGAAATAATTCAAGTGAAACAAACTTT TTTCAATCCTCGATATTTAGATGATACTAAAATTCGAAAGCTTTTCGAAT GTGATTGTGTATTTATGTACAAGTTAAATGTTTTGCAAATACTACTTAAC TGCCTAAAAATAAAAATGATTTTGCAATAAAAGTTCTTGCCATATTTTCT CACTCAGGATCATGACAACTGTGTAATCTTTCTGAGTTATGCTTACATTT TGCCTTTATGACACCATAACGATTTTGTTACTCTATTACAAGTGTTTGTA TTACAGCAAAGTGGCATTCTGTTTCCCTGCGTTGGTTGCGGATTATATTT ATTTAGGTCTTGATTGTTCGGTTCAATAGATGCAGGGTTTTCGTTTTTCG GTTCAGTAGATGTTGGTTTTTCGTCTTTCGTTTCAGTAGATGCAGGTATT TCGTTTGTCGGTTCAGTAGATGCAGGTTTTTCGTTCGAAGGCTCAGTAGA TGCGGGTTTTTCGTCTTTCGGCTCAGTGGATTCAGATTTTTCGTCTTTCG GTTCCGTGGATGCAGGATTCTCGTCTTTCGGTTCAGTGGATGCGGGTTTT TCGTCTTTCGGCTCAGTGGATTCAGATTTTTCGTCTTTCGGTTCCGTGGA TGCAGGATTCTCGTCTTTCGGTTCAGTGGATGCGGGTTTTTCGTCTTTCG GCCCAGCGGAAGCGGGTTTTTCGTTCGAGGGCTCAGTAGATGCAGGTTTT TCGTCTTTCGGTTCAGTGGGTGCGGGTTTTTCGTCTTTCGGTTCAGTGGA TGTGGGTTTTTCGTCTTTCGGTTCAGTGGATGCGGGTTTTTCGTCTTTCG GTTCAGTGGATGCGGGTTTTTCGTCTTTCGGTTCAGTGGATGTGGGTTTT TCGTCTTTTGGTTCAGTGGAAGCGGGCTTTTCATTCGAGGGCTCAGTAGG TGCAGGTTTTTCGTTTTTCGGTTCAGTGGATGTGGGTTTTTCGTCTTTCG GTTCAATAGACACGGGCTTTTCGTTTGAGGGCTCGTTATTCGATGGAGGT TTTGTAGGGTCGTCCTCCGGCTTCTTTTCGGGGTCTTTTTCTTCAAAAGG GGACTAAAAGAGTAAGTAAACAAAAAAAAATTGAAATATGCACGCATTTG ATTGTAGATTTCATACTGTTTTTTTTTCATGTTAAATTCACAAAATAATA AAGAACTATAACAAATACAAATTACAAACTAAGTTAGTACTCTGAAAATT CTTCAGTAATGGTTGTTACAAAACCCGATTTATGCTTTCAAATAAAATTA TTCTTTGACCTCTTCACATTTGAATTTTTCTTTCAAACTTGGGTTGGGAA TGCATTTCTCGTTTGGTTTGCATGGATTTTTGGAACAAGGTCCAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073059TCONS_00073059Clytia hemisphaericatranscript
TCONS_00073058TCONS_00073058Clytia hemisphaericatranscript
TCONS_00073057TCONS_00073057Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073059-proteinTCONS_00073059-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1146959..1155854 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GHITMgrowth hormone-inducible transmembrane protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.95 9.53 8 8.31 11.38 8.26 17.85 21.27 26.97 31.63 42.49 26.37 25.99 24.73 18.64 23.72 27.05 26.6 17.64 23.62 30.94 32.47 16.34 20.05 37.98 42.26 45.44 43.01 30.54 21.98