TCONS_00000923-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000923-protein
Unique NameTCONS_00000923-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length236

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000923-protein ID=TCONS_00000923-protein|Name=TCONS_00000923-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
MEENAKLPVEISIENEKLLKLELELQETLQIVELKSQTLLEFEEGIQRAR
TALASLRKANEKFSNSILEWDDEKIFEDKLRPLVGSHKSILQSHQSHFQK
ACLSGRARIQKLESDHLLARSDKPTDATGKSDLRNRKLQKAEAATKSKDA
TQDLKRIALLMASQVEQNEQSNVILETSSQQIVKMHDEYKGLTGIIALSR
KLLNKYNRRELTDTLLIFFGLLLFFATVLYILSKRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000548XLOC_000548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000923TCONS_00000923Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005606Sec20
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..147
IPR005606Sec20PFAMPF03908Sec20coord: 146..236
e-value: 1.1E-21
score: 76.5

Blast
[Close]
BLAST of TCONS_00000923-protein vs. Swiss-Prot (Human)
Match: SEC20 (Vesicle transport protein SEC20 OS=Homo sapiens GN=BNIP1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.715e-22
Identity = 84/228 (36.84%), Postives = 123/228 (53.95%), Query Frame = 0 
Query:    9 VEISIENEKLLKLELELQETLQIVELKSQTLLEFEEGIQRARTALASLRKANEKFSNSILEWDDEKIFEDKLRPLVGSHKSILQSHQSHFQKACLSGRARIQKLESDHLLARSDKPTDATGKSDLRNRKLQKAEAATKSKDATQDLKRIALLMASQVEQNEQSNVILETSSQQIVKMHDEYKGLTGIIALSRKLLNKYNRRELTDTLLIFFGLLLFFATVLYILSKRL 236
            V + I N++++K +LE++  +Q +   S  L    E   + +     LR   +       E D E   +  L+  V +HK  + S+Q+ ++KA L+ +  I  LE   LL          G   LR RK  K   A  S   T+ L  I+ +MA QV+Q+E++   L TSS+ I+  ++E+K ++G I L RKL+ KYNRRELTD LLIF  L LF ATVLYI+ KRL
Sbjct:    7 VHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQDLEQLAKEQDKESEKQLLLQE-VENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQ---------GGDLLRQRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRL 224
The following BLAST results are available for this feature:
BLAST of TCONS_00000923-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEC201.715e-2236.84Vesicle transport protein SEC20 OS=Homo sapiens GN... [more]
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