TCONS_00001987-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001987-protein
Unique Name	TCONS_00001987-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	290

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001987-protein ID=TCONS_00001987-protein|Name=TCONS_00001987-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MDWSFFNPKSEEFFAAIVKKAMIDRQESGSKRNDFIDIFIDILKKGLAIE
DGTRPSETGEATLKENSTANDSETTLKKEEIEKLIIANSLLMFFAGFDTL
SSASSIMLYFLAMHPEYQEKLYQEIKEAAESNGSDQLDYATIMGLSYMEK
FFQESFRMYPLTHLERASVNDFKIPDTDMVIPKDVYVLIASSAFVKDEKY
FPNPTVFDPENFAPEMKAARHPFVSGGFGHGPRNCIAQRFATMEVKIIMS
RILMKYRVLKCDKTVEKLIPDPTSMSQDPIGSVWFTVEKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001025	XLOC_001025	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001987	TCONS_00001987	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002403	Cyt_P450_E_grp-IV
IPR001128	Cyt_P450
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	heme binding
GO:0004497	monooxygenase activity
GO:0005506	iron ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002403	Cytochrome P450, E-class, group IV	PRINTS	PR00465	EP450IV	coord: 235..253 score: 30.36 coord: 145..161 score: 18.78 coord: 195..213 score: 25.3
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 150..161 score: 28.63 coord: 235..246 score: 36.34 coord: 95..112 score: 35.04 coord: 226..235 score: 50.5
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 29..273 e-value: 9.2E-56 score: 189.4
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 11..52 coord: 79..290
None	No IPR available	GENE3D	1.10.630.10		coord: 7..290 e-value: 1.2E-56 score: 191.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..73
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 228..237

Blast

[Close]

BLAST of TCONS_00001987-protein vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 127.487 bits (319), Expect = 1.990e-33
Identity = 82/254 (32.28%), Postives = 122/254 (48.03%), Query Frame = 0

Query:   13 FFAAIVKKAMIDRQESGSK-RNDFIDIFIDILKKGLAIEDGTRPSETGEATLKENSTANDSETTLKKEEIEKLIIANSLLMFFAGFDTLSSASSIMLYFLAMHPEYQEKLYQEIKEAAESNGSDQLDYATIMGLSYMEKFFQESFRMYPLT-HLERASVNDFKIPDTDMVIPKDVYVLIASSAFVKDEKYFPNPTVFDPENFAPEMKAARHPFVSGGFGHGPRNCIAQRFATMEVKIIMSRILMKYRVLKCDKT 264
            F    VK+    R E   K R DF+ + ID                       +NS   +S   L   E+    +A S++  FAG++T SS  S ++Y LA HP+ Q+KL +EI     +       Y T++ + Y++    E+ R++P+   LER    D +I    M IPK V V+I S A  +D KY+  P  F PE F+ + K    P++   FG GPRNCI  RFA M +K+ + R+L  +    C +T
Sbjct:  248 FLRKSVKRMKESRLEDTQKHRVDFLQLMID----------------------SQNSKETESHKALSDLEL----VAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT--YDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET 471

The following BLAST results are available for this feature:

BLAST of TCONS_00001987-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001987-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP3A4	1.990e-33	32.28	Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1...	[more]

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TCONS_00001987-protein (polypeptide) - C. hemisphaerica