TCONS_00002240-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002240-protein
Unique NameTCONS_00002240-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length339

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002240-protein ID=TCONS_00002240-protein|Name=TCONS_00002240-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MSTTNKKFFSLECAVQNYHWGKFGEQSTVASLGRMQKNFNFDAEKHYAEL
WMGDHHRGPSIVQNMSEPTTLTQLLQNNPSLVGENIIKRFGKANLPFLFK
VLSVETALSIQAHPNKEHAEILNRTRPDVYQDDNHKPEIAIAITPFEALC
GFRPASEILSYFHEVEELLFVVGQKAVDELINAEMATDKKAKDEAVRRAI
KGCLSQLMACDPNTIKEQLAKLITRLNECHKKHEDTSLYLGRLLLRVHSQ
YPGDVGCFVIYFLNYIQLEPFESIFLGPDVPHAYIYGDIIECMANSDNVV
RAGFTPKFKDVDTLIEMLDYKPQTVEETKXQIQRCRHFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001185XLOC_001185Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002240TCONS_00002240Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016305Mannose-6-P_Isomerase
IPR001250Man6P_Isoase-1
IPR014710RmlC-like_jellyroll
IPR018050Pmannose_isomerase-type1_CS
IPR011051RmlC_Cupin
Vocabulary: Biological Process
TermDefinition
GO:0009298GDP-mannose biosynthetic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004476mannose-6-phosphate isomerase activity
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009298 GDP-mannose biosynthetic process
molecular_function GO:0004476 mannose-6-phosphate isomerase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016305Mannose-6-phosphate isomerasePRINTSPR00714MAN6PISMRASEcoord: 263..282
score: 46.0
coord: 95..116
score: 75.91
coord: 301..320
score: 63.0
coord: 247..262
score: 41.25
coord: 130..153
score: 70.42
coord: 282..301
score: 71.5
coord: 11..29
score: 46.32
coord: 46..61
score: 57.5
IPR016305Mannose-6-phosphate isomerasePIRSFPIRSF001480PMIcoord: 5..337
e-value: 4.6E-111
score: 369.9
IPR001250Mannose-6-phosphate isomerase, type ITIGRFAMTIGR00218TIGR00218coord: 6..333
e-value: 2.7E-70
score: 235.3
IPR001250Mannose-6-phosphate isomerase, type IPFAMPF01238PMI_typeIcoord: 9..333
e-value: 2.1E-105
score: 352.9
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 4..328
e-value: 6.6E-87
score: 290.9
IPR018050Phosphomannose isomerase, type I, conserved sitePROSITEPS00966PMI_I_2coord: 282..307
IPR018050Phosphomannose isomerase, type I, conserved sitePROSITEPS00965PMI_I_1coord: 130..138
IPR011051RmlC-like cupin domainSUPERFAMILY51182RmlC-like cupinscoord: 6..333

Blast
[Close]
BLAST of TCONS_00002240-protein vs. Swiss-Prot (Human)
Match: MPI (Mannose-6-phosphate isomerase OS=Homo sapiens GN=MPI PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 5.370e-99
Identity = 157/323 (48.61%), Postives = 200/323 (61.92%), Query Frame = 0 
Query:    7 KFFSLECAVQNYHWGKFGEQSTVASLGRMQKNFNFDAE-KHYAELWMGDHHRGPS-IVQNMSEPTTLTQLLQNNPSLVGENIIKRFGKANLPFLFKVLSVETALSIQAHPNKEHAEILNRTRPDVYQDDNHKPEIAIAITPFEALCGFRPASEILSYFHEVEELLFVVGQKAVDELINAEMATDKKAKDEAVRRAIKGCLSQLMACDPNTIKEQLAKLITRLNECHKKHEDTSLYLGRLLLRVHSQYPGDVGCFVIYFLNYIQLEPFESIFLGPDVPHAYIYGDIIECMANSDNVVRAGFTPKFKDVDTLIEMLDYKPQTVEE 327
            + F L CAVQ Y WGK G  S VA L          AE K YAELWMG H RG + I+ N     TL+Q +  N   +G  +   F   NLPFLFKVLSVET LSIQAHPNKE AE L+   P  Y D NHKPE+AIA+TPF+ LCGFRP  EI+++  +V E  F++G +A   L    M+ D     +AV  +++ C S LM  +   + EQL  L+ R+++      +     G LLL++H QYPGD+GCF IYFLN + L+P E++FL  +VPHAY+ GD +ECMA SDN VRAG TPKF DV TL EML Y P + ++
Sbjct:    5 RVFPLSCAVQQYAWGKMGSNSEVARLLASSDPLAQIAEDKPYAELWMGTHPRGDAKILDNRISQKTLSQWIAENQDSLGSKVKDTF-NGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQHYPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHL-KQTMSHD----SQAVASSLQSCFSHLMKSEKKVVVEQLNLLVKRISQQAAAGNNMEDIFGELLLQLHQQYPGDIGCFAIYFLNLLTLKPGEAMFLEANVPHAYLKGDCVECMACSDNTVRAGLTPKFIDVPTLCEMLSYTPSSSKD 321
The following BLAST results are available for this feature:
BLAST of TCONS_00002240-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPI5.370e-9948.61Mannose-6-phosphate isomerase OS=Homo sapiens GN=M... [more]
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