TCONS_00002257-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002257-protein
Unique NameTCONS_00002257-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length134

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002257-protein ID=TCONS_00002257-protein|Name=TCONS_00002257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=134bp
MAFRLISHHRTMFSPMITAARRMLTIDITSPQEFDEKVLKSEVPVIIDFH
ATWCGPCKQMDPTLKSVIQNYEGKINLVKVDVDELQDLAMEYDVMSIPYL
VGLNKGKIVQTAVGAKPQDQIIQFVDDVLAASQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001194XLOC_001194Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002257TCONS_00002257Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
molecular_function GO:0015035 protein disulfide oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availableGENE3D3.40.30.10coord: 16..134
e-value: 1.3E-34
score: 119.3
NoneNo IPR availableSFLDSFLDG00337Thioredoxin-likecoord: 26..127
e-value: 1.1E-32
score: 107.1
NoneNo IPR availableCDDcd02947TRX_familycoord: 32..126
e-value: 1.90829E-32
score: 110.726
IPR005746ThioredoxinPIRSFPIRSF000077Thioredoxincoord: 23..129
e-value: 1.6E-32
score: 109.6
IPR005746ThioredoxinTIGRFAMTIGR01068TIGR01068coord: 31..127
e-value: 4.2E-31
score: 105.1
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 28..126
e-value: 3.4E-30
score: 103.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 19..130
score: 13.117
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 46..64
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 27..129

Blast
[Close]
BLAST of TCONS_00002257-protein vs. Swiss-Prot (Human)
Match: THIOM (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 4.297e-28
Identity = 44/121 (36.36%), Postives = 77/121 (63.64%), Query Frame = 0 
Query:   10 RTMFSPMITAARRMLTIDITSPQEFDEKVLKSEVPVIIDFHATWCGPCKQMDPTLKSVIQNYEGKINLVKVDVDELQDLAMEYDVMSIPYLVGLNKGKIVQTAVGAKPQDQIIQFVDDVLA 130
            RT+++  I+    + T +I    +F ++V+ SE PV++DFHA WCGPCK + P L+ ++    GK+ + KVD+D+  DLA+EY+V ++P ++ +  G +V   VG K +DQ+  F+  ++ 
Sbjct:   50 RTIYTTRIS----LTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 166
The following BLAST results are available for this feature:
BLAST of TCONS_00002257-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THIOM4.297e-2836.36Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2... [more]
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