|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002270-protein ID=TCONS_00002270-protein|Name=TCONS_00002270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
AKQEGFRSRSNHIKQLWKTHHKETAMDAEHKINLQLGLFSFLMILGILGN
VLVIYVYSRAKNRKRFLKFERMILILAVVDLLASTINPAFYIYQIKTNYK
SWHFGYAGCKVIPALGPIFSAISLGLILLMAIDRDRAVCTPFKKQFSLST
LYKAIAVTIFLSIGINVPYMYFLDVHEGGKRCLIGRKGALLYIKSLVSIN
IISDTCFFLIFSVTTVRVCLKLAYKTQLTYPRSREFRARETRRILKMIVS
MGVCFIALIFPRDIFITTTYMSYLHPPPIKVKNYFMVNAILKVIHTSNSV
VNVFLYSVFNRRFRRDALHLFMQFKYIRQLSGYTSEDSSYYSDDGASSRR
FSSRKQSDMNQSKRLQVLRSISVFKTEVSSINSSIQPSLQTSPDMTKRSN
GTHTPQYVANAPGTPYIGVSHLEDGEKEKVVRIATPPTVAEKRPKHETTI
TQTIDHLNIMEDPTPKCSISPRDLNNPIFGDVEIDHIKEDDENDDDRFDE
MIMSASLINEQSPML Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 69..90
score: 28.11
coord: 34..58
score: 28.96
coord: 116..138
score: 22.88
coord: 288..314
score: 24.34 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 49..306
e-value: 6.5E-21
score: 74.7 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 5..366
e-value: 5.3E-42
score: 143.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 335..360 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 385..406 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 34..335 |
| IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 49..306
score: 21.796 |
Blast
The following BLAST results are available for this feature:
|
