TCONS_00002332-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002332-protein
Unique NameTCONS_00002332-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length695

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002332-protein ID=TCONS_00002332-protein|Name=TCONS_00002332-protein|organism=Clytia hemisphaerica|type=polypeptide|length=695bp
MAYRLLRKHSFAALLKNTRLVRHASTTNAKPFDKVLIANRGEIACRVMET
CRRLGIKTVAVYSEADARSKHVDMADEAVCIGPARSNESYLVIDKVIEAC
HQTGAQAVHPGYGFLSENYHFYEELEKAGITFVGPNKYALQAMGDKIESK
RIGVQAKVNVIPGFDGVVKDPDEAVQLAESIGYPVMLKASAGGGGKGMRI
AYNEKEVRSGFVLSSQEAAKSFNDDRLLIEKFVEEPRHIEIQIMADSHGN
CVYLNERECSVQRRNQKVVEEAPSPFIDPDTRAAMGQQAVMLAKEVGYNS
AGTVEFLVDKHKNFYFLEMNTRLQVEHPITECITGVDLVELMLRSAAGQT
LPLEQKDVPLNGWAVECRVYAEDPYKNFGLPSIGLLSNYVEPKQINNVRC
DSGIKEGSEISIYYDSMICKLVTYGKDRASALNTMDKALDSYVIRGLAHN
ISLLRDICDNPNFRAGTITTGFLPQEYPEGFHGKQLKVQELDELLAGVAF
MHLKRDEISRTFLDRPISLKSKESVDLYITVGGEKHLVTGLYDTDSIKIT
VNGDREIVLKSNWDYSSLIYEANVNGKDVIFQKHERNGNSYKLQHCGTVF
SLDVKTELENQLDEYMLEKPDEGASPMLRTPMPGTVISVDCKVGDKVFEG
QEVAVIEAMKLQNSLTMGKGGIVKKIYVSPGQNLNEDDLILELEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001233XLOC_001233Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002332TCONS_00002332Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005482Biotin_COase_C
IPR013815ATP_grasp_subdomain_1
IPR005481BC-like_N
IPR000089Biotin_lipoyl
IPR005479CbamoylP_synth_lsu-like_ATP-bd
IPR011761ATP-grasp
IPR011764Biotin_carboxylation_dom
IPR011053Single_hybrid_motif
IPR016185PreATP-grasp_dom
IPR011054Rudment_hybrid_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0046872metal ion binding
GO:0004075biotin carboxylase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0004075 biotin carboxylase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005482Biotin carboxylase, C-terminalSMARTSM00878Biotin_carb_C_2coord: 366..474
e-value: 2.1E-47
score: 173.5
IPR005482Biotin carboxylase, C-terminalPFAMPF02785Biotin_carb_Ccoord: 366..474
e-value: 2.4E-33
score: 114.3
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 154..239
e-value: 4.0E-21
score: 74.5
NoneNo IPR availableGENE3D3.30.470.20coord: 240..477
e-value: 1.0E-99
score: 332.3
NoneNo IPR availableGENE3D3.40.50.20coord: 31..153
e-value: 1.5E-53
score: 179.9
NoneNo IPR availableGENE3D2.40.50.100coord: 623..695
e-value: 2.8E-14
score: 51.9
NoneNo IPR availableCDDcd06850biotinyl_domaincoord: 628..693
e-value: 5.83442E-22
score: 89.7827
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 113..382
IPR005481Biotin carboxylase-like, N-terminal domainPFAMPF00289Biotin_carb_Ncoord: 32..139
e-value: 3.9E-44
score: 149.6
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 628..693
e-value: 1.2E-15
score: 56.9
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 619..694
score: 23.003
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domainPFAMPF02786CPSase_L_D2coord: 145..352
e-value: 3.0E-79
score: 265.3
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domainPROSITEPS00867CPSASE_2coord: 316..323
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domainPROSITEPS00866CPSASE_1coord: 183..197
IPR011761ATP-grasp foldPROSITEPS50975ATP_GRASPcoord: 152..347
score: 44.367
IPR011764Biotin carboxylation domainPROSITEPS50979BCcoord: 31..478
score: 52.025
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 614..694
IPR016185Pre-ATP-grasp domainSUPERFAMILY52440PreATP-grasp domaincoord: 15..143
IPR011054Rudiment single hybrid motifSUPERFAMILY51246Rudiment single hybrid motifcoord: 361..477

Blast
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BLAST of TCONS_00002332-protein vs. Swiss-Prot (Human)
Match: PCCA (Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo sapiens GN=PCCA PE=1 SV=4)

HSP 1 Score: 751.51 bits (1939), Expect = 0.000e+0
Identity = 384/677 (56.72%), Postives = 488/677 (72.08%), Query Frame = 0 
Query:   28 NAKPFDKVLIANRGEIACRVMETCRRLGIKTVAVYSEADARSKHVDMADEAVCIGPARSNESYLVIDKVIEACHQTGAQAVHPGYGFLSENYHFYEELEKAGITFVGPNKYALQAMGDKIESKRIGVQAKVNVIPGFDGVVKDPDEAVQLAESIGYPVMLKASAGGGGKGMRIAYNEKEVRSGFVLSSQEAAKSFNDDRLLIEKFVEEPRHIEIQIMADSHGNCVYLNERECSVQRRNQKVVEEAPSPFIDPDTRAAMGQQAVMLAKEVGYNSAGTVEFLVDKHKNFYFLEMNTRLQVEHPITECITGVDLVELMLRSAAGQTLPLEQKDVPLNGWAVECRVYAEDPYKNFGLPSIGLLSNYVEPKQINNVRCDSGIKEGSEISIYYDSMICKLVTYGKDRASALNTMDKALDSYVIRGLAHNISLLRDICDNPNFRAGTITTGFLPQEYPEGFHGKQLKVQELDELLA-----GVAF----MHLKRDEISRTFLDRPISLKSKESVDLYITVGGEKHLVTGLYDTDSIKITVNGDREIVLKSNWDYSSLIYEANVNGKDVIFQKHERN-GNSYKLQHCGTVFSLDVKTELENQLDEYMLEKPDEGASPMLRTPMPGTVISVDCKVGDKVFEGQEVAVIEAMKLQNSLTMGKGGIVKKIYVSPGQNLNEDDLILELE 694
            N K FDK+L+ANRGEIACRV+ TC+++GIKTVA++S+ DA S HV MADEAVC+GPA +++SYL +D ++EA  +T AQAVHPGYGFLSEN  F   L    + F+GP+ +A+QAMGDKIESK +  +A+VN IPGFDGVVKD +EAV++A  IGYPVM+KASAGGGGKGMRIA++++E R GF LSSQEAA SF DDRLLIEKF++ PRHIEIQ++ D HGN ++LNERECS+QRRNQKVVEEAPS F+D +TR AMG+QAV LA+ V Y+SAGTVEFLVD  KNFYFLEMNTRLQVEHP+TECITG+DLV+ M+R A G  L  +Q D+ +NGWAVECRVYAEDPYK+FGLPSIG LS Y EP  +  VR DSGI+ GS+ISIYYD MI KL+TYG DR  AL  M  ALD+YVIRG+ HNI+LLR++  N  F  G I+T FL   YP+GF G  L   E ++LLA      VAF     H +  E SR  + +P     + SV L+  V    H V    +     + V+G + + + S W+ +S +   +V+G     Q   R  G +  +Q  GTV+ +++ T L  +L+++MLEK  E  S +LR+PMPG V++V  K GD V EGQE+ VIEAMK+QNS+T GK G VK ++   G  + E DL++ELE
Sbjct:   59 NEKTFDKILVANRGEIACRVIRTCKKMGIKTVAIHSDVDASSVHVKMADEAVCVGPAPTSKSYLNMDAIMEAIKKTRAQAVHPGYGFLSENKEFARCLAAEDVVFIGPDTHAIQAMGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLGDKHGNALWLNERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAGTVEFLVDSKKNFYFLEMNTRLQVEHPVTECITGLDLVQEMIRVAKGYPLRHKQADIRINGWAVECRVYAEDPYKSFGLPSIGRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLITYGSDRTEALKRMADALDNYVIRGVTHNIALLREVIINSRFVKGDISTKFLSDVYPDGFKGHMLTKSEKNQLLAIASSLFVAFQLRAQHFQ--ENSRMPVIKPDIANWELSVKLHDKV----HTVVASNNGSVFSVEVDGSK-LNVTSTWNLASPLLSVSVDGTQRTVQCLSREAGGNMSIQFLGTVYKVNILTRLAAELNKFMLEKVTEDTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 728
The following BLAST results are available for this feature:
BLAST of TCONS_00002332-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCCA0.000e+056.72Propionyl-CoA carboxylase alpha chain, mitochondri... [more]
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