TCONS_00002457-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002457-protein
Unique NameTCONS_00002457-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002457-protein ID=TCONS_00002457-protein|Name=TCONS_00002457-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MIQRIAIVLSLWAVLVTAQKSGTLDIGEVTTDSIDTSFTFDVAPTKLTAT
LDQKDPFKRLINAEEMTMTDTTRKFDNLTPLTDYTVEIAGSDGAGAQVAL
KKDVQTKGPPVNNVKVDATEATGTKATVTFDEVTGLKDIQDTADVEVEAC
PADKTKCVTQTVKAKGGTTVEFEGLTPGTEYTYSAYVKNPANDAKGPPSE
GKFTTAPGTGEFDSFLCFLIELEPDINYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001314XLOC_001314Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002457TCONS_00002457Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 107..194
e-value: 0.0096
score: 25.1
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 110..191
e-value: 2.4E-6
score: 27.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 110..209
score: 11.44
IPR003961Fibronectin type IIICDDcd00063FN3coord: 108..205
e-value: 1.28708E-5
score: 40.5575
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 118..208
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 111..213
e-value: 1.2E-9
score: 37.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 15..110
e-value: 0.0016
score: 18.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002457-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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