|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002465-protein ID=TCONS_00002465-protein|Name=TCONS_00002465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=907bp
MIYWKIIGFLFLALVLISCHASATKDSRSKDKEDKNSDDKKKSKHGKKED
KKQSSVKKITDNNNNDDYETNQGFPILYPETHMSMRRNLTAVTSSNNSTN
HSTSNLLSDNTSEETITTESMGQHQKTNNTNNSTDGEEGKCHKDVDLLFL
LDSSESVRYSNWKIVIKFVKDLCNQFSLNTTRVAFIRFASEPEISVPLTQ
FNTTEARDEAIDNIFYKTGGTRTDIALKKAQEVFPVGEPRNQVIMLLTDG
PTNKLEISKDRFVEGKDLVAAPAERLKETGIALFCIGIEPDSETPEEIET
MREEMLTIASEPTNKHVFMSDGYHELQRKVQTVSQAACVVNGAWSHWSEF
SPCSVTCSYGTRVRLRTCTEPVPANNGADCTGPRVEDEECYMGPCKVGQS
APSIVYTTPFPTTRHHTATSSSYYSNASIIPTLPPASNTQKVMVTTPAYY
SPTNSTLLTSISFTNATNFQSTPQNITNTSSIVSSTNQNPSSPSVANQGS
LLNQATSNQNLSLPATASHNSKQPVEFPPADDNKPTTSSSKTEARLTTSN
KTSTDSLASNNQPTMNSLANVTSNKSTPSGFVDSKNNLLPTLTVEKVLHP
SLRANMTNNDAKKVSGASTRSPTESSEGSCSEASLLKLPLNDTQFTASSV
YSHDTDDDYVKREYAPPNARLNNEINGGGWCAEHKYSTQDDKDQFIQIDL
GKQMSVDGVATQGSHLLENWVKKYNLRYSDDGKSWQYYSKNPLNGNNDQN
SIQRSVISPPITGRYFQLNPIEWNQGVEPDKHDICMRIALFKCKETPSSE
AATSPTVKRSFIQPRPHHRSINNKRGVVIREQAWWTHYPEEKAKLTLLNV
NKIVGPSEARIRRQDEDVLTVFPGHKKGHKRIFSKIRKIAHNIMKKIRAK
SKKQRMK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00453 | VWFADOMAIN | coord: 145..162
score: 39.85
coord: 182..196
score: 19.1
coord: 243..251
score: 44.02 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 24..74 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 468..499 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 92..139 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 603..632 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 512..582 |
| None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..19
score: 5.0 |
| None | No IPR available | CDD | cd00057 | FA58C | coord: 642..791
e-value: 6.81147E-30
score: 115.527 |
| None | No IPR available | CDD | cd01450 | vWFA_subfamily_ECM | coord: 145..318
e-value: 3.2898E-30
score: 117.007 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | SMART | SM00209 | TSP1_2 | coord: 344..396
e-value: 1.5E-12
score: 57.7 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PFAM | PF00090 | TSP_1 | coord: 345..395
e-value: 7.5E-13
score: 48.4 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | GENE3D | 2.20.100.10 | | coord: 341..395
e-value: 1.2E-16
score: 60.3 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PROSITE | PS50092 | TSP1 | coord: 341..396
score: 13.078 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | SUPERFAMILY | 82895 | TSP-1 type 1 repeat | coord: 338..395 |
| IPR002035 | von Willebrand factor, type A | SMART | SM00327 | VWA_4 | coord: 144..331
e-value: 6.3E-29
score: 112.1 |
| IPR002035 | von Willebrand factor, type A | PFAM | PF00092 | VWA | coord: 146..327
e-value: 4.4E-30
score: 105.1 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 138..340
e-value: 5.2E-31
score: 107.5 |
| IPR002035 | von Willebrand factor, type A | PROSITE | PS50234 | VWFA | coord: 146..333
score: 22.281 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 138..338 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | SMART | SM00231 | disc_4 | coord: 629..793
e-value: 4.9E-11
score: 52.7 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | PFAM | PF00754 | F5_F8_type_C | coord: 646..787
e-value: 3.0E-25
score: 88.7 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | PROSITE | PS01285 | FA58C_1 | coord: 679..713 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | PROSITE | PS50022 | FA58C_3 | coord: 630..793
score: 30.375 |
| IPR008979 | Galactose-binding domain-like | GENE3D | 2.60.120.260 | | coord: 628..795
e-value: 5.1E-33
score: 113.8 |
| IPR008979 | Galactose-binding domain-like | SUPERFAMILY | 49785 | Galactose-binding domain-like | coord: 634..794 |
Blast
BLAST of TCONS_00002465-protein vs. Swiss-Prot (Human)
Match: CNTP4 (Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 6.933e-18 Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 0
Query: 664 YAPPNARLNNEINGGGWCAEHKYSTQDDKDQFIQIDLGKQMSVDGVATQGSHLLENWVKKYNLRYSDDGKSWQYYSKN----PLNGNNDQNSIQRSVISPPITGRYFQLNPIEWNQGVEPDKHDICMRIALFKC 793
+ P ARLN GGW +K Q++QIDLG++M V VATQG + NWV Y L +SD G +W+ Y + +GN + +S+ + P I R+ + P+EWN K I MRI +F C
Sbjct: 54 HGPGFARLNRRDGAGGWSP-----LVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWN-----PKGRIGMRIEVFGC 177
The following BLAST results are available for this feature:
|
