TCONS_00002472-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002472-protein
Unique NameTCONS_00002472-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length241

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002472-protein ID=TCONS_00002472-protein|Name=TCONS_00002472-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MLPTPAKFHYVFNLRDLSRIWQGMLNAVSDVITETSTLLSQWQHECTRVI
CDRFVNEMDKSWFRKVAVQICDEEIGASHDLSCLEEEAYFVDFLRDAPEP
TGDEPDDADFEAPKIYEPIESMDSLRERLSHFMHQYNESVRGSGLDLVFF
EDAITSLLKISRILATPRGNALLVGVGGSGKQSLTRLASFIAGYKTFQIT
ITRSVSFRKSLLPIFKIFLRSFFLDYRCTVQSSRSLTFIYP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001322XLOC_001322Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002472TCONS_00002472Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024317Dynein_heavy_chain_D4_dom
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 52..222
e-value: 6.5E-4
score: 18.6
NoneNo IPR availablePFAMPF12775AAA_7coord: 2..45
e-value: 2.4E-9
score: 36.8
IPR024317Dynein heavy chain, P-loop containing D4 domainPFAMPF12780AAA_8coord: 144..206
e-value: 2.1E-22
score: 79.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 146..206

Blast
[Close]
BLAST of TCONS_00002472-protein vs. Swiss-Prot (Human)
Match: DYH5 (Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3)

HSP 1 Score: 285.419 bits (729), Expect = 2.133e-88
Identity = 141/242 (58.26%), Postives = 173/242 (71.49%), Query Frame = 0 
Query:    1 MLPTPAKFHYVFNLRDLSRIWQGMLNAVSDVITETSTLLSQWQHECTRVICDRFVNEMDKSWFRKVAVQICDEEIGASHDL--SCLEEEAYFVDFLRDAPEPTGDEPDDADFEAPKIYEPIESMDSLRERLSHFMHQYNESVRGSGLDLVFFEDAITSLLKISRILATPRGNALLVGVGGSGKQSLTRLASFIAGYKTFQITITRSVSFRKSLLPIFKIFLRSFFLDYRCTVQSSRSLTFIY 240
            MLPTPAKFHYVFNLRDLSR+WQGMLN  S+VI E + LL  W+HEC RVI DRF    D +WF K  V + +EE G    L   C   + YFVDFLRDAPE  G+  ++AD E PKIYEPIES   L+ERL+ F+  YNES+RG+G+D+VFF DA+  L+KISR++ TP+GNALLVGVGGSGKQSLTRLASFIAGY +FQIT+TRS +   +L+   K+        YR   Q  + +TFI+
Sbjct: 2781 MLPTPAKFHYVFNLRDLSRVWQGMLNTTSEVIKEPNDLLKLWKHECKRVIADRFTVSSDVTWFDKALVSLVEEEFGEEKKLLVDC-GIDTYFVDFLRDAPEAAGETSEEADAETPKIYEPIESFSHLKERLNMFLQLYNESIRGAGMDMVFFADAMVHLVKISRVIRTPQGNALLVGVGGSGKQSLTRLASFIAGYVSFQITLTRSYN-TSNLMEDLKVL-------YRTAGQQGKGITFIF 3013
The following BLAST results are available for this feature:
BLAST of TCONS_00002472-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYH52.133e-8858.26Dynein heavy chain 5, axonemal OS=Homo sapiens GN=... [more]
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