TCONS_00002477-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002477-protein
Unique NameTCONS_00002477-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002477-protein ID=TCONS_00002477-protein|Name=TCONS_00002477-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
MSQAGFLQALQEFPKDTINEEMVELMEPYFKAKRVCGNVAGLCSWTKAMA
KFFSVNKEVLPLKANLSIQEAKLELAMSDLQTAQQQLDEKQKELDAAQAE
YESAMREKQILVDDAETCKRKMVAASALINGLGGEKERWTEQSKEFAQQT
ERLVGDVLLGTAFLSYSGPFNQEFRKSLEKNWQKELHQRQIPFTFKLNVT
SLLVDTATLAEWNLQGLPNDELSSQNGIIVSKAARYPLLIDPQSQGKIWI
KNKEKDHGLQVTSLNHKYFRTDLEDALSLGRPLLIEDVGEELDPVLDILE
KNFIKLGSSFKVKLGDKEVDVMNGFTMYITTKLPNPSYTPERIKRII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001323XLOC_001323Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002477TCONS_00002477Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024743Dynein_HC_stalk
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..114
NoneNo IPR availablePFAMPF12781AAA_9coord: 211..344
e-value: 3.6E-47
score: 160.2
NoneNo IPR availableGENE3D1.10.287.620coord: 45..153
e-value: 4.2E-6
score: 25.8
IPR024743Dynein heavy chain, coiled coil stalkPFAMPF12777MTcoord: 5..182
e-value: 5.9E-26
score: 91.2

Blast
[Close]
BLAST of TCONS_00002477-protein vs. Swiss-Prot (Human)
Match: DYH5 (Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3)

HSP 1 Score: 525.013 bits (1351), Expect = 3.780e-170
Identity = 250/350 (71.43%), Postives = 292/350 (83.43%), Query Frame = 0 
Query:    1 MSQAGFLQALQEFPKDTINEEMVELMEPYFK--------AKRVCGNVAGLCSWTKAMAKFFSVNKEVLPLKANLSIQEAKLELAMSDLQTAQQQLDEKQKELDAAQAEYESAMREKQILVDDAETCKRKMVAASALINGLGGEKERWTEQSKEFAQQTERLVGDVLLGTAFLSYSGPFNQEFRKSLEKNWQKELHQRQIPFTFKLNVTSLLVDTATLAEWNLQGLPNDELSSQNGIIVSKAARYPLLIDPQSQGKIWIKNKEKDHGLQVTSLNHKYFRTDLEDALSLGRPLLIEDVGEELDPVLD-ILEKNFIKLGSSFKVKLGDKEVDVMNGFTMYITTKLPNPSYTPE 341
            M+   FLQ LQ+FPKDTINEE++E + PYF+        AKRVCGNVAGLCSWTKAMA FFS+NKEVLPLKANL +QE +  LAM DLQ AQ +LD+KQ ELD  QAEYE AM EKQ L++DAE C+ KM  AS LI+GL GEKERWTEQS+EFA QT+RLVGDVLL TAFLSYSGPFNQEFR  L  +W+KE+  R+IPF   LN++ +L+D  T++EWNLQGLPND+LS QNGIIV+KA+RYPLLIDPQ+QGKIWIKNKE  + LQ+TSLNHKYFR  LED+LSLGRPLLIEDVGEELDP LD +LE+NFIK GS+FKVK+GDKEVDV++GF +YITTKLPNP+YTPE
Sbjct: 3357 MTAGNFLQNLQQFPKDTINEEVIEFLSPYFEMPDYNIETAKRVCGNVAGLCSWTKAMASFFSINKEVLPLKANLVVQENRHLLAMQDLQKAQAELDDKQAELDVVQAEYEQAMTEKQTLLEDAERCRHKMQTASTLISGLAGEKERWTEQSQEFAAQTKRLVGDVLLATAFLSYSGPFNQEFRDLLLNDWRKEMKARKIPFGKNLNLSEMLIDAPTISEWNLQGLPNDDLSIQNGIIVTKASRYPLLIDPQTQGKIWIKNKESRNELQITSLNHKYFRNHLEDSLSLGRPLLIEDVGEELDPALDNVLERNFIKTGSTFKVKVGDKEVDVLDGFRLYITTKLPNPAYTPE 3706
The following BLAST results are available for this feature:
BLAST of TCONS_00002477-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYH53.780e-17071.43Dynein heavy chain 5, axonemal OS=Homo sapiens GN=... [more]
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