TCONS_00002617-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002617-protein
Unique Name	TCONS_00002617-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	621

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002617-protein ID=TCONS_00002617-protein|Name=TCONS_00002617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=621bp
MNLFKTWLLALLMSLMVTASSAKSLSSETDWEERLEEEVEILRTLREEIE
DSMSNDQEKHIPDETDIDQEAGTNEILGNEIKKEDASDQGKHIPDETDID
QKSGTNEILGNGTKKDGSTMTEVEINELLGYEGDEMILSEEQQKRGVSTS
IRLWRDQNTGVIHIPYEIDSSIASSDHPKILRHISEMNEAIRCSQEAWKP
KTPQDKHYVLFRNSAGCSSYLGITKFQDSKDPSKTYQPISLAAGCIRFNQ
GTVLHEMLHCMGFSHEQSRSDRDEYVTINWSNIIANRERNFQKVSNMMDG
SKETDYDYGSVLHYGRNSFGKTVNGVKQETITPKDSNAAIGQRNGMSKLD
IEELNLIYCPEAPETTSAETTPAKMTTPLTTTTTISTTTTTTPTTTTTTT
TPTTTMTTTTPKTTTTTPKTTTTTPTTTTTTTTPTTTTTIPTTTTTTTTP
TTTTTTTTPTTTTTTTTTPSTTTTVPATTTTSTSPKPKLQSLFRCSGVCQ
ANQCYQISSRRLTANSKGYQSTNAWRSGFIAFRFKDCLMKKICSDDDFYN
LQTKKLCLSIDHKRTKWWWSPRLVVYSRAFVNMRHVNYAPRRTNGTYKLD
INMKCKSSNWGYTSNKQYLIT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001418	XLOC_001418	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002617	TCONS_00002617	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001506	Peptidase_M12A
IPR006026	Peptidase_Metallo
IPR024079	MetalloPept_cat_dom
IPR034035	Astacin-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 28..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..485
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 151..360
IPR001506	Peptidase M12A	PRINTS	PR00480	ASTACIN	coord: 266..283 score: 55.46 coord: 346..359 score: 35.83 coord: 305..320 score: 50.0 coord: 247..265 score: 39.82
IPR001506	Peptidase M12A	PFAM	PF01400	Astacin	coord: 163..360 e-value: 5.4E-44 score: 150.0
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 150..310 e-value: 2.6E-23 score: 93.4
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 146..362 e-value: 1.7E-38 score: 132.0
IPR034035	Astacin-like metallopeptidase domain	CDD	cd04280	ZnMc_astacin_like	coord: 164..358 e-value: 1.506E-59 score: 197.408

Blast

[Close]

BLAST of TCONS_00002617-protein vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 109.768 bits (273), Expect = 1.309e-25
Identity = 108/412 (26.21%), Postives = 167/412 (40.53%), Query Frame = 0

Query:   76 ILGNEIKKEDASDQGKHIPDETDID--QKSGTNEILGNGTKKDGSTMTEVEINELLGYEGDEMILSEEQQKRGVSTSIRLWRDQNTGVIHIPYEIDSSIASSDHPKILRHISEMNEA--IRCSQEAWKPKTPQDKH-YVLFRNSAGCSSYLGITKFQDSKDPSKTYQPISLAAGCIRFNQGTVLHEMLHCMGFSHEQSRSDRDEYVTINWSNIIANRERNFQK--VSNMMDGSKETDYDYGSVLHYGRNSFGKTVNGVKQETITPK-DSNAAIGQRNGMSKLDI-EELNLIYC-PEAP---------ETTSAETTPAKMTTPLTTTTTISTTTTTTPTTTTTTTTPTTTMTTTTP-------------KTTTTTPKTTTTTPTTTTTTTTPTTTTTIPTTTTTTTTPTTTTT 455
            ILG  +    A   G   PD    +  Q SG  +I        G  + E   +  L  EGD   +      R +S +   W    +GV+ +P+ + S         IL  ++E   +  IR         T QD+  ++      GC S +G          S   Q +SLA  C++  +G VLHE++H +GF HE +R+DRD Y+ +NW+ I+   E NF K   SNM+     T YDY SV+HYGR +F +   G+   TITP    +  IGQR  +S  DI   L L  C P  P          +T     PA ++         + + +  P+ ++    P       +P             + +   P+T  ++P +      P            +T PT  ++
Sbjct:   21 ILGAPLASSCAGACGTSFPDGLTPEGTQASGDKDIP---AINQGLILEETPESSFL-IEGD---IIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRF-------VTYQDQRDFISIIPMYGCFSSVGR---------SGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML-----TPYDYSSVMHYGRLAFSR--RGLP--TITPLWAPSVHIGQRWNLSASDITRVLKLYGCSPSGPRPRGRGSHAHSTGRSPAPASLSLQRLLEALSAESRSPDPSGSSAGGQPVPAGPGESPHGWESPALKKLSAEASARQPQTLASSPRSRPGAGAPGVAQEQSWLAGVSTKPTVPSS 400

The following BLAST results are available for this feature:

BLAST of TCONS_00002617-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002617-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ASTL	1.309e-25	26.21	Astacin-like metalloendopeptidase OS=Homo sapiens ...	[more]

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TCONS_00002617-protein (polypeptide) - C. hemisphaerica