TCONS_00002643-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002643-protein
Unique NameTCONS_00002643-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length431

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002643-protein ID=TCONS_00002643-protein|Name=TCONS_00002643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MAYRKGESHMEGNKKLYFPEGALLNQMEVAVVESERRKSEILKEPFVVYL
VESRPVENHLGSEPECALWRRYSEFELLRNFLMANYPYIVLPPLPEKRPI
PFQINVQKFQIAHDKFDPDFIERRRQGLECFLLRLASHPVISQDGVFRGF
LKQEEGWKESVAATNWQQKVDGRFKSISASLSIKKPDQRFENIKNYAESL
NTNINGILKIQQRLSTKQYAILKSHTDYGKLFSEWSAIEPEIGDTLQQAG
HQMDRLASNTESILTEEEISYVDQLKEYLYFTESLRSVVRKQALRQHDLE
KAEEQLSSKSKQRDEIQKEVTAAENGEELPNQGFTLKSVSTMLFGQDSLE
TKQEKLLACEQQVKDAEEMVKIAENDVNVFMDKSLKDYDRFKKQKVRDIN
EIMENYVKSQLKINKQGLQQWQQMREYFMNM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001430XLOC_001430Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002643TCONS_00002643Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 349..383
NoneNo IPR availableCOILSCoilCoilcoord: 24..44
NoneNo IPR availableCOILSCoilCoilcoord: 299..319
NoneNo IPR availableGENE3D1.20.1270.60coord: 178..431
e-value: 1.4E-27
score: 96.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..325
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 24..154
e-value: 5.8E-21
score: 85.6
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 22..173
e-value: 2.7E-27
score: 94.8
IPR001683Phox homologous domainPFAMPF00787PXcoord: 31..153
e-value: 5.6E-19
score: 68.1
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 27..157
score: 17.349
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 39..156
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 366..428
coord: 188..309

Blast
[Close]
BLAST of TCONS_00002643-protein vs. Swiss-Prot (Human)
Match: SNX4 (Sorting nexin-4 OS=Homo sapiens GN=SNX4 PE=1 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 1.739e-113
Identity = 175/412 (42.48%), Postives = 270/412 (65.53%), Query Frame = 0 
Query:   24 LNQMEVAVVESERRKSEI---LKEPFVVYLVESRPVENHLG-SEPECALWRRYSEFELLRNFLMANYPYIVLPPLPEKRPIPFQINVQKFQIAHDKFDPDFIERRRQGLECFLLRLASHPVISQDGVFRGFLKQEEGWKESVAATNWQQKVDGRFKSISASLSIKKPDQRFENIKNYAESLNTNINGILKIQQRLSTKQYAILKSHTDYGKLFSEWSAIEPEIGDTLQQAGHQMDRLASNTESILTEEEISYVDQLKEYLYFTESLRSVVRKQALRQHDLEKAEEQLSSKSKQRDEIQKEVTAAENGEELPNQGFTLKSVSTMLFGQDSLETKQEKLLACEQQVKDAEEMVKIAENDVNVFMDKSLKDYDRFKKQKVRDINEIMENYVKSQLKINKQGLQQWQQMREYFMNM 431
            L ++E++V E+E+R       ++E +  YL+E+R VE+  G S    +LWRRYSEFELLR++L+  YP+IV+PPLPEKR           +++ D  DPDF+ERRR GLE FLLR+ASHP++ +D +F  FL QE  WKE+V  T +Q K D R K+++A+  +K PD+RF ++K+Y++ L + I+ +L+++ R++ + Y + K H +YG++FSEWSAIE E+GD LQ AGH MD  AS+ + IL +EE  Y DQLKEYL++ E+LR+V RK  L Q+DLE A + L+SK +Q +E+   VT          + F+LK ++T LFGQ++ E ++ ++   E+Q+ + E+ +K    +   F+  +  D +RFK+QK RD+ E + +Y   Q+ + K+G+Q W   +E F  M
Sbjct:   55 LKKIEISVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRA-----EFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEE-HYADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEEL---VTGT-------VRTFSLKGMTTKLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKEALISYAVMQISMCKKGIQVWTNAKECFSKM 450
The following BLAST results are available for this feature:
BLAST of TCONS_00002643-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX41.739e-11342.48Sorting nexin-4 OS=Homo sapiens GN=SNX4 PE=1 SV=1[more]
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