Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002645-protein ID=TCONS_00002645-protein|Name=TCONS_00002645-protein|organism=Clytia hemisphaerica|type=polypeptide|length=601bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00002645-protein vs. Swiss-Prot (Human)
Match: HERC4 (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 2.117e-50 Identity = 118/348 (33.91%), Postives = 190/348 (54.60%), Query Frame = 0 Query: 173 WGASTKGTLGHGEAEEELV--PRVVEALLGRDIRKIACGFEHTLAVSVTGEVFSMGSGRGGKLGDNIHDRYMPLKVGSLSEKKVVALSCSELHSAVVTSTGELYSFGR-TGPRLGYSIEGRKQEIPKQVDALKKHFIVKVSCGLKYTLALTKEGQVFAFGENGFGQLGLGHRDECK---TPTKIKAFDGLRITQISAGMEHAGAVTENGDVWLWGNNDFGQLGTGDTESRDSPHEAPSTFWNEEIQDIKCGGKHTVVLSCTGKIYCFGDGQYGQLGVNLRPTQTNLSTPCNVPIPSKVVQVDCGIAHTAA-VTDNGTLYTWGKGSGARLGHSDHRDRTTPTLVESLAY 513 WG ++ G LG G +EE+V PR + + + +R + CG HT+ V G V++ G G+LG R P +V +L + +VA+SC E H+ + G++Y++G + +LG +P+ + +L IV+V+CG ++LAL+K +VF +G+N +GQLGLG +CK +P +K+ G+ Q++AG H+ +T +G ++ WG N FGQLG D R P+ S +++I I CG HT L+ G ++ FG G YGQLG N + N + + S V ++ CG HT+A V +G +Y++G G +LG +R +P V+ Y Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE-KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL-MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346 HSP 2 Score: 157.918 bits (398), Expect = 2.102e-40 Identity = 104/292 (35.62%), Postives = 154/292 (52.74%), Query Frame = 0 Query: 243 PLKVGSLSEKKVVALSCSELHSAVVTSTGELYSFGRTGPRLGYSIEGRKQEIPKQVDALKKHFIVKVSCGLKYTLALTKEGQVFAFGENGFGQLGLGHRDEC-KTPTKIKAFDGLRITQISAGMEHAGAVTENGDVWLWGNNDFGQLGTG-DTESRDSPHEAPSTFWNEEIQDIKCGGKHTVVLSCTGKIYCFGDGQYGQLGVNLRPTQ--TNLSTPCNVPIPSKVVQVDCGIAHTAAVTDNGTLYTWGKGSGARLGHSDHRDRTTPTLVESLAYKNVQSIACGAHHTAASV 530 P K K+V + C H+ V G +Y+ G LG + ++ P+QV AL IV VSCG +TLAL +GQV+A+G + GQLGL +EC + P IK+ ++I Q++ G H+ A+++ +V+ WG N +GQLG G D + + SP S +Q + GG H+ VL+ +G I+ +G ++GQLG+N + NL K+V + CG HTAA+T G ++T+G G +LGH+ P V L V IACG HT+A V Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND--LGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR---SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310 HSP 3 Score: 137.887 bits (346), Expect = 7.267e-34 Identity = 89/293 (30.38%), Postives = 154/293 (52.56%), Query Frame = 0 Query: 170 IYTWGASTKGTLGHGEAEEELVPRVVEALLGRDIRKIACGFEHTLAVSVTGEVFSMGSGRGGKLGDNIHDR--YMPLKVGSLSEKKVVALSCSELHSAVVTSTGELYSFGRTGP-RLGYSIEGRKQEIPKQVDALKKHFIVKVSCGLKYTLALTKEGQVFAFGENGFGQLGLGHRDECKTPTKIKAFDGLRITQISAGMEHAGAVTENGDVWLWGNNDFGQLGTGDTESRDSPHEAPSTFWNEEIQDIKCGGKHT-VVLSCTGKIYCFGDGQYGQLGVNLRPTQTNLSTPCNV 458 +YT G + G LGH ++ ++ P V AL ++I ++CG HTLA++ G+V++ G G+LG + +P + SLS+ ++V ++C HS ++ E++ +G+ +LG + +KQ P+ + +L ++V+ G ++ LT G +F +G N FGQLGL ++ P +K+ +I I G +H A+T+ G V+ +G +GQLG T +P + + +I CG +HT + +G+IY FG G GQLG + +N +P V Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG---STSNRKSPFTV 341 HSP 4 Score: 128.257 bits (321), Expect = 9.393e-31 Identity = 84/239 (35.15%), Postives = 129/239 (53.97%), Query Frame = 0 Query: 166 DACDIYTWGASTKGTLGHGEAEEEL-VPRVVEALLGRDIRKIACGFEHTLAVSVTGEVFSMGSGRGGK--LGDNIHDRYMPLKVGSLSEKKVVALSCSELHSAVVTSTGELYSFGRTG-PRLGYSIEGRKQEIPKQVDALKKHFIVKVSCGLKYTLALTKEGQVFAFGENGFGQLGLGHRDECKTPTKIKAFDGLRITQISAGMEHAGA-VTENGDVWLWGNNDFGQLGTGDTESRDSP 399 D +Y WG + G LG +EE + VPR +++L I ++ACG+ H+LA+S EVF G + G+ LG + + P + SL + ++ HS V+T +G ++ +GR +LG + E + +P + +L+ IV + CG +T ALTKEG VF FG G+GQLG P K+ G +T+I+ G +H A V +G ++ +G GQLGTG T +R SP Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338 HSP 5 Score: 96.6709 bits (239), Expect = 9.705e-21 Identity = 69/219 (31.51%), Postives = 108/219 (49.32%), Query Frame = 0 Query: 325 VFAFGENGFGQLGLGHRDE--CKTPTKIKAFDGLRITQISAGMEHAGAVTENGDVWLWGNNDFGQLGTGDTESRDSPHEAPSTFWNEEIQDIKCGGKHTVVLSCTGKIYCFGDGQYGQLGVNLRPTQTNLSTPCNVPIPS--KVVQVDCGIAHTAAVTDNGTLYTWGKGSGARLGH-SDHRDRTTPTLVESLAYKNVQSIACGAHH----TAASVIRAW 534 + +G FGQLGLG DE P K F R+ + G+ H V ++G V+ G ND GQL G +SR P + + + I + CG HT+ L+ G++Y +G GQLG L ++ + P N+ S ++VQV CG H+ A++ ++ WG+ +LG +D + +T+P L++SL +A G H T + I W Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQL--GHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214 The following BLAST results are available for this feature:
BLAST of TCONS_00002645-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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