TCONS_00002658-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002658-protein
Unique NameTCONS_00002658-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length927

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002658-protein ID=TCONS_00002658-protein|Name=TCONS_00002658-protein|organism=Clytia hemisphaerica|type=polypeptide|length=927bp
MLKGKFKSLLGKESDEINPGHIDISEATKATNDFVQQEEVVREFENDPTP
DTDIIDTIESTYFSDMDFDSSLHELQKLPEELSEEDLDKYRNNLRRQLQA
VSKQLSQKILDNQRAYVQGLDRVMELESNLQKATKTCKDGRRKLAQAEEA
ISVNALQLLSKNRRKVLLENLLKSLRFIKTLQQTDLRLKELLQEQNYASA
IQLCLECQQAAITFHQYHCISELSSNLQEILEQIEEQLDNALSKVCRVFS
KESYGKIQEAYALLGKTQIAMDQLQMHFVNTINTVAQSSLAEAVSIEDNI
QFSNICSKIPFEKFIPCLLELSKRFWCIMFNYKHIMQWHEEKRSKENESE
SESDSLFGDEYIKCKLDQGIERIWQDVQQKIKVFVLSANFAYFKYDDFIR
VLDIINRLICVGEDFSKNKSETLQESIQMQTINYFKAYHKVTLEELKMFL
ENEAWQLCPVKSSFKIHHLQEFCFMKTQLLTRSASNDDILSDRKGFFEQS
EFTYEKTPFHNLHAADKEAEDAKKYDYFDDEDDDDDDEDDIPDELKQDFV
DENTGEDVQPRRRSQRKGSTFSENTLIVTNTTLNVLRSFGKYMQMMSVLK
PIAFDVVLCMSQLFDYYMYSVFTFFACRQDSHTEDCLSKLDEGKLKICLQ
RIHSTINSNEVSPPSLSMMVDLNEVENMHGFNYRIIGVESLSFLASQLRL
IYKNLESLIPINKRAFLSQFYSQTVDVASDLRLPVFQMVGKKVIPYDKIL
QKMLQVRWDPKEIMSQHNSYVDALVQEYQNLQNRINQMKNMVPVPKSSAQ
NLWKSVLKKSNRIFVEGFSSAKKCSNEGRALMLLDFQQFLMKVDKITNVK
PVPDREYVENYIKAFYLSEAILEQWLSEHQEYTPKQLNNLVTCGTASHIG
KKMRQKLLGLLDELESKHKPNTQHDNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001440XLOC_001440Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002658TCONS_00002658Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019514DUF2451_C
IPR019515VPS54_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 764..791
NoneNo IPR availableCOILSCoilCoilcoord: 220..244
NoneNo IPR availableCOILSCoilCoilcoord: 123..150
NoneNo IPR availableGENE3D1.20.5.1230coord: 67..917
e-value: 0.0018
score: 17.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..569
IPR019514Protein of unknown function DUF2451, C-terminalPFAMPF10474DUF2451coord: 678..911
e-value: 9.5E-80
score: 267.6
IPR019515Vacuolar protein sorting-associated protein 54, N-terminalPFAMPF10475Vps54_Ncoord: 55..338
e-value: 9.2E-84
score: 281.0

Blast
[Close]
BLAST of TCONS_00002658-protein vs. Swiss-Prot (Human)
Match: VPS50 (Syndetin OS=Homo sapiens GN=VPS50 PE=1 SV=3)

HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 427/925 (46.16%), Postives = 602/925 (65.08%), Query Frame = 0 
Query:   41 VREFENDPTPDTDIIDTIESTYFSDMDFDSSLHELQKLPEELSEEDLDKYRNNLRRQLQAVSKQLSQKILDNQRAYVQGLDRVMELESNLQKATKTCKDGRRKLAQAEEAISVNALQLLSKNRRKVLLENLLKSLRFIKTLQQTDLRLKELLQEQNYASAIQLCLECQQAAITFHQYHCISELSSNLQEILEQIEEQLDNALSKVCRVFSKESYGKIQEAYALLGKTQIAMDQLQMHFVNTI-NTVAQSSLAEAVSIEDN-------IQFSNICSKIPFEKFIPCLLELSKRFWCIMFNYKHIMQWHEEKRSKENESESESDSLFGDE-------YIKCKLDQGIERIWQDVQQKIKVFVLSANFAYFKYDDFIRVLDIINRLICVGEDFSKNKSETLQESIQMQTINYFKAYHKVTLEELKMFLENEAWQLCPVKSSFKIHHLQEFCFM-KTQLLTRSASNDDILSDRKG--FFEQSEFTYEKTPFH-NLHAADKEAEDAKKYDYFDDEDDDD------DDEDDIPDELKQDFVDENTGED----VQPRRRSQRKGSTFSENTL---IVTNTTLNVLRSFGKYMQMMSVLKPIAFDVVLCMSQLFDYYMYSVFTFFACRQDSHTEDCLSKLDEGKLKICLQRIHSTINSNEVSP------------------PSLSMMVDLNEVENMHGFNYRIIGVESLSFLASQLRLIYKNLESLIPINKRAFLSQFYSQTVDVASDLRLPVFQMVGKKVIPYDKILQKMLQVRWDPKEIMSQHNSYVDALVQEYQNLQNRINQMKNMVPVPKSSAQNLWKSVLKKSNRIFVEGFSSAKKCSNEGRALMLLDFQQFLMKVDKITNVKPVPDREYVENYIKAFYLSEAILEQWLSEHQEYTPKQLNNLVTCGTASHIGKKMRQKLLGLLDELE 915
            +RE  +DP  + ++I++IE  YFS   FD   +EL+KLP  L+ ++L+ YR+ L++Q  AVSK+++  IL+ Q AYV+ L+RV  L++ LQ A   C +GRR L  A+E  +  +L LL+  R++ LL  LLKSLR IKTLQ+TD+RL E+L+E++Y  AIQLCLECQ+AA TF  Y CISEL+S LQ+ LEQIEEQLD ALSK+C+ F    Y K+Q+AY LLGKTQ AMDQL MHF   I NTV Q  L        N       +Q+ ++C+ +  + +IPCL +L K  W +M +Y   M+WHE+  +++  S SE  ++ G E       YIK KL+ G+ RIWQDVQ K+K ++L  + + FKYDDFI VLDII+RL+ VGE+F  +KSE LQESI+ Q++NYFK YH+  L+EL+MFLENE W+LCPVKS+F I  L EF FM +++  + S S   + +  K    FEQ  +     PF    +  D+E ED    + ++ ++ +       D + D+P+ELK+D+VDE TG+     V       RK S +S N +   I+TNTTLNV+R  GKYMQMM++LKPIAFDV+  MSQLFDYY+Y+++TFF  R DS     L  L   +L+  L RI  ++   EVS                   P LS +V L   + ++G   R++  ESL FLA Q   +  +L++++P  K+ FL QFYSQTV  AS+LR P++ +V  K + Y+++L  M  V+WD KEIMSQHN YVDAL++E++    R+N++   V +P   +  LW+  ++ +NR  VEG+++ KKCSNEGRALM LDFQQFLMK++K+T+++P+PD+E+VE YIKA+YL+E  +E+W+ EH+EY+ KQL NLV     SHI KK RQKLL  +D+++
Sbjct:   40 LREQPSDPQAEQELINSIEQVYFSVDSFDIVKYELEKLPPVLNLQELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTASASEGSNMIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQ--YCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDGPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFG-RNDSLESTGLG-LSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKALDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID 960
The following BLAST results are available for this feature:
BLAST of TCONS_00002658-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS500.000e+046.16Syndetin OS=Homo sapiens GN=VPS50 PE=1 SV=3[more]
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