TCONS_00002798-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002798-protein
Unique Name	TCONS_00002798-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	357

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002798-protein ID=TCONS_00002798-protein|Name=TCONS_00002798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
RKDLRSDENRCFYQLSKQETNMASRGGKTKKPTTYLGKTNKKFEHVKAVV
DTGSSVSNYMSKIEDLRKNYRFRKDELFKRMKISTFSQLVLQVAEVVNLE
MERISELDENSPRSLLPEQEEQTDGGGTDRSCLLDVIRGVGELSTSGNNN
NNNDTVESEEKEQHHHHREIIAPDPSSLPYLLLDIRDSDAFEEGHIIGAI
NYPSAMLNRTVNYLSKEICAFKNKPGKIIIVYDDDEKLAPQVATSLLQKD
VENVIMLSGGMKVLHKKFPSCFITGTVPSTCFSPKTDRKGKLKPPPKVIS
NIGVEWYTPELLESIQEHLDEVLLSNESSRMSSRTTTRNSKVSSARSSVP
STASSYR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001526	XLOC_001526	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002798	TCONS_00002798	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001763	Rhodanese-like_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 156..270 e-value: 1.3E-9 score: 47.9
IPR001763	Rhodanese-like domain	GENE3D	3.40.250.10		coord: 154..276 e-value: 4.1E-16 score: 58.6
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 181..262 e-value: 2.8E-10 score: 40.6
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 176..273 score: 14.115
IPR001763	Rhodanese-like domain	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 180..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..357
None	No IPR available	CDD	cd00158	RHOD	coord: 180..262 e-value: 1.27206E-15 score: 70.021

Blast

[Close]

BLAST of TCONS_00002798-protein vs. Swiss-Prot (Human)
Match: CEP41 (Centrosomal protein of 41 kDa OS=Homo sapiens GN=CEP41 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.871e-71
Identity = 133/342 (38.89%), Postives = 208/342 (60.82%), Query Frame = 0

Query:   40 NKKFEHVKAVVDTGSSVSNYMSKIEDLRKNYRFRKDELFKRMKISTFSQLVLQVA----EVVNLEMERISELDENSPRSLLPEQE--EQTDG--------------------GGTDRSCLLDVIRGVGELSTSGNNNNNNDTVESEEKEQHHHHREIIAPDPSSLPYLLLDIRDSDAFEEGHIIGAINYPSAMLNRTVNYLSKEICAFKNKPGKIIIVYDDDEKLAPQVATSLLQKDVENVIMLSGGMKVLHKKFPSCFITGTVPSTC---FSPKTDRK-GKLKPPPKVISNIGVEW-YTPELLESIQEHLDEVL-LSNESSRMS-SRTTTRNSKVSSARSS 348
            N +++H+K+ +DTG+S++ Y  K+E+++KNYR++KDELFKR+K++TF+QL++QVA    + + +  E I  L++N   +  P+ E   +T+G                    G + RS L  VI GVGEL          D  +   K+   H ++   PD    P+LLLD+RD D++++ HI+GA +YP A L+RT+N  S +I  +KN  GKIII+YDDDE+LA Q AT++ ++  EN+ MLSGG+KVL +KFP   ITG++P++C     P + RK    K PP    N   +W +TPE L+ I+ +L+E    ++  SR++ + ++ R SKV  ARS+
Sbjct:   20 NPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVTTFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPSPEQFINNAGAGDSSRSTLQSVISGVGEL----------DLDKGPVKKAEPHTKDKPYPD---CPFLLLDVRDRDSYQQCHIVGAYSYPIATLSRTMNPYSNDILEYKNAHGKIIILYDDDERLASQAATTMCERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSARKRSSPKGPPLPAEN---KWRFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESKVPGARSA 345

The following BLAST results are available for this feature:

BLAST of TCONS_00002798-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CEP41	4.871e-71	38.89	Centrosomal protein of 41 kDa OS=Homo sapiens GN=C...	[more]

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TCONS_00002798-protein (polypeptide) - C. hemisphaerica