TCONS_00002823-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002823-protein
Unique NameTCONS_00002823-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length435

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002823-protein ID=TCONS_00002823-protein|Name=TCONS_00002823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MLWVKLRKKKNQLESAKILENPYFTWGCSDDLALRLKKTLYCSEDDDCYD
VSSIALTDVAVSILKESARCSRRKITHRYASSLTRQLSISPCALIMSLLY
SERLRQCNPGYLDRISSSDLYVISMLVATKFLHDEGEQEEIYNDEWAEAA
GLAVSTVNRLEREFLDAIDWNIYVKPADFLDYCSKIETKIALKYGLQRGW
FSYTDLAQFLHAIQYQTVLKDVIEKTVTVICGCALVYGMSLSILVSTALT
YASQTSHRIQTITQTSTNHTRVNDFTPLSMLPSSSIFASFSDRRLTRRRG
FRSHRKTTDMNANQPEANLEEISDLALERLQENVTASRPTLPCTADSQTH
ALRFESQLQHRARQTRLSITFDLTDRRFMAFDEVGYHEEFSKNVAKCYGY
AATNVKKKIDPIGSILRRNAKKFMYDPRILGMTVI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001540XLOC_001540Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002823TCONS_00002823Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR013922Cyclin_PHO80-like
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0019901 protein kinase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 60..173
e-value: 1.1E-4
score: 21.6
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 78..172
e-value: 1.5E-6
score: 28.6

Blast
[Close]
BLAST of TCONS_00002823-protein vs. Swiss-Prot (Human)
Match: CNPD1 (Protein CNPPD1 OS=Homo sapiens GN=CNPPD1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 4.467e-53
Identity = 87/209 (41.63%), Postives = 139/209 (66.51%), Query Frame = 0 
Query:   32 LALRLKKTLYCSED--DDC-YDVSSIALTDVAVSILKESARCSRRKITHRYASSLTRQLSISPCALIMSLLYSERLRQCNPGYLDRISSSDLYVISMLVATKFLHDEGEQEEIYNDEWAEAAGLAVSTVNRLEREFLDAIDWNIYVKPADFLDYCSKIETKIALKYGLQRGWFSYTDLAQFLHAIQYQTVLKDVIEKTVTVICGCALVY 237
            L+ R+++ LY   D   DC  +  S  + D+AV +L+++A    R++  +Y + ++R+  ISPCA++++L+Y ERLR  NP YL  +SSSDL++ISM+VA+K+L+DEGE+EE++NDEW  A G+AV T+N LER FL A+DW++Y  P +  +  S +E+ +A + G  RGW++YTDL   L    +Q  L  + ++ V + C  A+ Y
Sbjct:   31 LSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDLCVLLEQPTWQLALGSLCQRLVKLSCLLAVAY 239
The following BLAST results are available for this feature:
BLAST of TCONS_00002823-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNPD14.467e-5341.63Protein CNPPD1 OS=Homo sapiens GN=CNPPD1 PE=2 SV=2[more]
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