calmodulin (polypeptide) - C. hemisphaerica

Overview
Namecalmodulin
Unique NameTCONS_00002839-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002839-protein ID=TCONS_00002839-protein|Name=calmodulin|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ
DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIKEAFRVFDKDGNGF
ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMMSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001548XLOC_001548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002839TCONS_00002839Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 85..113
e-value: 4.2E-9
score: 46.2
coord: 48..76
e-value: 7.2E-9
score: 45.5
coord: 12..40
e-value: 8.5E-9
score: 45.2
coord: 121..149
e-value: 3.8E-9
score: 46.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 83..146
e-value: 2.0E-18
score: 66.5
coord: 13..73
e-value: 1.5E-15
score: 57.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 44..79
score: 14.792
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 8..43
score: 17.303
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 117..149
score: 14.904
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 81..116
score: 18.056
IPR002048EF-hand domainCDDcd00051EFhcoord: 12..74
e-value: 9.30555E-21
score: 79.8993
IPR002048EF-hand domainCDDcd00051EFhcoord: 85..147
e-value: 2.44656E-22
score: 84.1365
NoneNo IPR availableGENE3D1.10.238.10coord: 1..38
e-value: 8.0E-26
score: 89.2
NoneNo IPR availableGENE3D1.10.238.10coord: 100..147
e-value: 3.1E-25
score: 87.5
NoneNo IPR availableGENE3D1.10.238.10coord: 62..99
e-value: 3.7E-29
score: 99.9
NoneNo IPR availableGENE3D1.10.238.10coord: 39..61
e-value: 1.7E-21
score: 75.6
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 94..106
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 130..142
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 57..69
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 21..33
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 2..148

Blast
[Close]
BLAST of calmodulin vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.739e-103
Identity = 144/149 (96.64%), Postives = 148/149 (99.33%), Query Frame = 0 
Query:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMMSK 149
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI+EAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of calmodulin vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM33.739e-10396.64Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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