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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002876-protein ID=TCONS_00002876-protein|Name=TCONS_00002876-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1242bp
LSQLKKKGLADEMDVTLIRDCEKEIQKKLDGLLELTNALENALVALKKVK
ELPLDIDQVNVTEYLQGILKTCVQRKELPQQDEKEQKLKPKTDINSELNQ
GEIKEEKSEATVQKTNPQENDYILLDNDKFITELMCTSGAKVGVKYKVEV
TSPLQVDGTFWASNVETGFVQDKLEPLSEKLRQGTMKDRELWVVDDYSKM
VCVKSSQNNLWMRAKVIKDVNQSTVRVQFIDIGRSEECAKSKLSLVPEGF
EKIPYMAFHCTLSEDKVKIDYELKWKFSDLVKKKVLNFTVQKLIDRDNEK
FALGKLETILDSPPVIINEQILSGCSNSQGRKDQSKPDSIKSRDIRVHEG
DQDITSVSAVIRNNSVSSSQEDKITEKPKEEANKSSDEKKTATLPSKESI
QDAQQDITPEKCNKDTTEQANPNKEAPSLPPIKIPERTSSDVDWGESKTP
GAEEHFQISPLDDNAFDSPNNSMGEGQLKNALLGKPSTETTNAPTHQNAE
QISKLEQQLSDLIQQKDIILQKSPPAERDQAIQGLLLQIFNIQQQIKQES
ESRGRPVLPPSFLHQPSTFRGHQPSMNNLEPANFTPPQSFNPFGTRSPRP
GQFNNQQGIPEQGIPQQGIPQQGIPQQGIPQQGIPQQGFPQQGIPQQGIP
QQGIPQQGIPQQGIPQQPVMGNVSNPVLSGNDFNVKIQQLEAIKRCLQMP
SGLLDQNQIQNLHVMKQQLEQQFKAENLRQMQMGITQPTALPPNLQPHPT
MPPLTSNLPPLPAMQPKSPPLPTHLQPHPTMPPLTSNLPPLPAMQPKSPP
LPTHLQPHPTMPPLTSNLHPLPAMQPKSPPLPTNLQPQVTVPSLTSNLSP
PPPTIENQPPSNLCSTEFLDEINRETEEFRKQMISPGKSTDSLGGSRHSN
AASKEMLNKSMEDVKKTKSFIVPSYQTISTESKADWTARELRNLSNPLLS
DPTARFFSTIVSEREGKFFPSLLKTAQNGHFLFIDSDAAIFEREWAKTKG
PKFLIVKHKLTDGTWVAGGVLEVISKVKRRSGPLSAQCEVNIISSAMASD
TPWFRSEKATREIRSDIAERYIEMVVDKLKNGKSTTLFRFQEKQLQQSAE
LAQKQSRPNNPPILPQSSSYFSDSITTPKTNKTSQPSMEIDTASRSKNNT
NSSQQSSIGATNPSIQLSNPHSLHQADEDWESELSPKPTSPKPDSTNLQP
TPSNHLNVDTGSTEYLENSEDESERNMNAEYETFGLSEDDFS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002999 | Tudor |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 32..52 |
| None | No IPR available | COILS | Coil | Coil | coord: 502..522 |
| None | No IPR available | GENE3D | 2.40.50.90 | | coord: 235..327
e-value: 4.4E-9
score: 36.1 |
| None | No IPR available | GENE3D | 2.30.30.140 | | coord: 182..234
e-value: 2.7E-8
score: 32.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1098..1242 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 547..675 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 79..112 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 322..494 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 745..816 |
| None | No IPR available | CDD | cd04508 | TUDOR | coord: 199..243
e-value: 7.36256E-6
score: 43.7407 |
| None | No IPR available | SUPERFAMILY | 63748 | Tudor/PWWP/MBT | coord: 172..263 |
| IPR002999 | Tudor domain | SMART | SM00333 | TUDOR_7 | coord: 189..251
e-value: 8.5E-4
score: 28.6 |
| IPR002999 | Tudor domain | PFAM | PF00567 | TUDOR | coord: 157..263
e-value: 7.9E-14
score: 51.6 |
Blast
The following BLAST results are available for this feature:
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