TCONS_00002962-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002962-protein
Unique NameTCONS_00002962-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length300

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002962-protein ID=TCONS_00002962-protein|Name=TCONS_00002962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MKIVLLATFLCVNFFAKTFSQEQGPYFEGDIILTPDQQDAILEQKSKNSF
ASVRTGLWLDNGKVQKIIEYGIDSKLARSPMAVRVIREAVEEYEKFTCLR
FKEVSGRPKTKYHMYFFIGRGCFSNVGRLEGGNRISLSANGCWTKGIAIH
EMGHSLGFFHEQSRVDRDNYVDIKWENMFDGAKRNFDKYSTEKLYDFETK
YDYESIMHYPENAFAKPGKITIVARDPKYQKVIGQRGGLSRIDKIQLNRM
YCNDNYTTPKPWTVAPKDCKDKDKETCRRLRNVCKADAVKKICPVTCRVC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001628XLOC_001628Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002962TCONS_00002962Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR003582ShKT_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 142..160
score: 50.61
coord: 161..178
score: 50.37
coord: 86..104
score: 36.32
coord: 239..252
score: 36.55
coord: 200..215
score: 52.4
IPR001506Peptidase M12APFAMPF01400Astacincoord: 67..253
e-value: 2.6E-59
score: 200.0
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 54..205
e-value: 1.8E-32
score: 123.9
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 51..255
e-value: 6.1E-53
score: 179.2
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 269..300
score: 7.729
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 66..251
e-value: 2.30387E-76
score: 232.462
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 62..253

Blast
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BLAST of TCONS_00002962-protein vs. Swiss-Prot (Human)
Match: MEP1A (Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.140e-35
Identity = 89/233 (38.20%), Postives = 120/233 (51.50%), Query Frame = 0 
Query:   27 FEGDIILTPDQQDAILEQKSKNSFASVRTGLWLDNGKVQKIIEYGIDSKLARSPMAVRVIREAVEEYEKFTCLRFKEVSGRPKTKYHMYFFIGRGCFSNVGRLEGGNRISLSANGCWTKGIAIHEMGHSLGFFHEQSRVDRDNYVDIKWENMFDGAKRNFDKYSTEKLYDFETKYDYESIMHYPENAFAKPGKI-TIVARDPKYQKVIGQRGGLSRIDKIQLNRMY-CNDNYT 257
            F+GDI+L          QKS+N       GL   N +    I Y +   L  +  A   I  A E +   +C+ FK   G      ++ F    GC+S VG    G  IS+   GC  K I  HE+ H+LGF+HEQSR DRD+YV+I W+ +  G + NFD Y    + D  T YDYES+MHY   +F K   + TI A+ P++  +IGQR   S ID  +LNRMY C   +T
Sbjct:   55 FQGDILL----------QKSRN-------GLRDPNTRWTFPIPYILADNLGLN--AKGAILYAFEMFRLKSCVDFKPYEGESS---YIIFQQFDGCWSEVGDQHVGQNISI-GQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIGQRLDFSAIDLERLNRMYNCTTTHT 264
The following BLAST results are available for this feature:
BLAST of TCONS_00002962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1A2.140e-3538.20Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE... [more]
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