TCONS_00003050-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003050-protein
Unique NameTCONS_00003050-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003050-protein ID=TCONS_00003050-protein|Name=TCONS_00003050-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
MKKSTINNVLSAFRRKVRKKRNGKTKNLSVFVLGAANTGKSSIINVLCDD
EFSDAYSPTKFDIYEKELIGSGNNNPTVKFVFFDISGKDSCPIMRREYIS
KADIFLLVYSADQPSSYKQLLRYKTEIEQVKEDRISELSVAIIRNKTDLE
TKKVDEKKLAWCRSVYHCSAKYGHNISHLTEFLTTESLCAGNIIEQKLNK
GLSGRYIYGDNDQSKSIRLIRPKSYYKHHEGEERSELYEDFALAEGLGTP
SLPKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001681XLOC_001681Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003050TCONS_00003050Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 136..149
score: 29.31
coord: 51..67
score: 26.31
coord: 28..49
score: 24.39
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 25..190
e-value: 2.0E-8
score: 6.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 28..190
e-value: 2.8E-4
score: -56.3
NoneNo IPR availableGENE3D3.40.50.300coord: 8..199
e-value: 1.4E-26
score: 92.2
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 30..180
e-value: 1.7E-20
score: 73.2
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 26..183
e-value: 5.6E-12
score: 43.7
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 18..244
score: 9.66
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..184

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003050-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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