TCONS_00003291-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003291-protein
Unique NameTCONS_00003291-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length530

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003291-protein ID=TCONS_00003291-protein|Name=TCONS_00003291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=530bp
LAKQRCEKHFKTMWTYAYLVIGALWHVTSLKGVISTECNTALGMESGAIK
DAQITASHWLYKDQPSRHYDPTNARLNSKTPAGAWCSDGIEENLDQYIQI
DLLKDTKVTGIATQGRTKYKEYIEKFQLLYQRDGDSQFRMYNESGTWKEF
PANKDNDNTAHNYFIRPVIARRLRIYPRGEEFAIYCTRLEIYGCKWSHQL
SALQSYSGPFGSQKNGVVMEDSTYDGLKTNNFVSDGLGKLTDAVYGEKNS
LLGSSGSPWVAYNTQNPEITFHFSEKKVIKQVMIHVNNNGNDIKVFQHLD
VAISSDGKSFSNVKRYSTDDAQRQKIDAYPVVCNLGEVVAKHLRLRFTKD
GDWLLISEVVFMTDTYPPKPVIPDRTTDNTDRGDKNTDDKDGGNQPFFTF
APEIVTPRGEPEKSTKDKDSKGLSFPIILTIALVTIVLAIIVGVIIFKSY
NKKKNKKHERCNTSQPAHIQNNHKQDNLSLLAGGDERYMPAYHPQPMKTP
QNTALIPQNGMYFQPPAMHQGGYNTKIMMS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001829XLOC_001829Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003291TCONS_00003291Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000421FA58C
IPR008979Galactose-bd-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000421Coagulation factor 5/8 C-terminal domainSMARTSM00231disc_4coord: 37..194
e-value: 7.6E-24
score: 95.2
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 66..190
e-value: 2.4E-19
score: 69.6
coord: 245..359
e-value: 5.4E-8
score: 32.9
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS01285FA58C_1coord: 84..115
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 38..194
score: 34.007
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 35..197
e-value: 2.4E-39
score: 134.2
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 211..368
e-value: 4.2E-11
score: 42.5
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 248..359
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 37..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..420
NoneNo IPR availableCDDcd00057FA58Ccoord: 40..193
e-value: 4.7786E-34
score: 124.387

Blast
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BLAST of TCONS_00003291-protein vs. Swiss-Prot (Human)
Match: DDR1 (Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 7.867e-26
Identity = 100/354 (28.25%), Postives = 151/354 (42.66%), Query Frame = 0 
Query:   36 TECNTALGMESGAIKDAQITASHWLYKDQPSRHYDPTNARLNSKTPAGAWCSDG-IEENLDQYIQIDLLKDTKVTGIATQGRTKY---KEYIEKFQLLYQRDGDSQFRMYNESGTWKEFPANKDNDNTAHNYFIRPVIARRLRIYPRGEEFAIYCTRLEIYGCKWSHQLSALQSYSGPFGSQ---KNGVVMEDSTYDGLKTNNFVSDGLGKLTDAVYGEKNSLLGSSGSPWVAYN----------TQNPEITFHFSEKKVIKQVMIHVNNN-------GNDIKVFQHLDVAISSDGKSFSNVKRYSTDDAQRQKIDAYPVVCNLGEVVAKHLRLRFTKDGDWLLISEVVFMTDT 365
             +C  ALGM+   I D+ I+AS        +RH     +RL S    GAWC  G +    ++Y+Q+DL +   V  + TQGR      KE+   ++L Y RDG       +  G  +    N+D +         P++AR +R YPR +     C R+E+YGC W      L SY+ P G        V + DSTYDG         GLG+L D V G  +         W  Y+          +   E+ F F   +  + + +H NN           ++       A++ +G+   +    +  D +     A  V   LG  VA+ L+ RF   G WLL SE+ F++D 
Sbjct:   29 AKCRYALGMQDRTIPDSDISASSSWSDSTAARH-----SRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQ-EVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWR---DGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNLGDPR-----ARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISDV 368
The following BLAST results are available for this feature:
BLAST of TCONS_00003291-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDR17.867e-2628.25Epithelial discoidin domain-containing receptor 1 ... [more]
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