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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003313-protein ID=TCONS_00003313-protein|Name=TCONS_00003313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1284bp
MQVAGMVFRDVIAPFSRRRKSRKHIFWRVXFRDVIAPFSRRRKSRKYIFW
RVNNCAGRNKNKTWPGASNMDESESEGLLGKDDDYYFGDDYSFSESEESV
SSSSDDEEKRDPNDAVEGTDDVRQEEIKVKKDQEEAEYNGRDSLEDSAYN
AVNNKIHYLCKDVQEALTRLREYELRTITRFSSFKSTKNFGNTDLFAKNH
KVYWEAEGISNNGKPFVILSSKSMDCHHGPDRNVKHKQTYKEKKKERLST
NSDHYKGKSYLIVQDTKKFDCPAKVTMQEIVQFPEYNKAKSPPSIKLETF
KRNSSKTLKEKLADKSLANYERRILLSIDDVGCHKYHPMGKTQNISQSMD
PEISSKIDMFVKEGITSVREMKRLIKLVVADMFGKENLPPSNSRRFYPSI
PIIRSKMDKSKQKLRYSMIDQECLQQKIDEWKKANPSLNTFYRPKEDTGD
GKCQSFLFVHQEKWQRDLLQRYGDEILLLDATHKTTRYAIPLFFLVVPTN
LDYQIVATFVTENESFESILEALKVVKSWNPSLKPLFAMTDYCKEEINSL
ECVFPGCEVLICDFHREQAWGRWLKATKNGCSGRKDDILPRLRRIARSKT
IEEMNEALISLRSSEFWEEDKYNNLREYIENYWLQIKERWVWAYRKDRFM
VNINTNNGVERQNESFKYSYLQRFKNSSLTGMLTKLIENFLPDKYTKYTE
ENYKMDSRYRKYNSSIPLYLLNRPHHFVKHCMEKIALAKYVDLSGIVIKG
QGEFVVHSFENIHNHYIVKFGDEETMPSCTCPSWKHSRYLCKHFFAIFRK
YPEVWSWNALSNLYKKSPFLTLDNSGEEEPSISDYLKDTPIEEDEKPFEE
KDNEMDTDNTGDLHGDENKVEYQATGLKYGTMARDLLTQLRNISYEFDDA
SENNKELFEALSPILQAAELKRKRESNLPLLPPLKKKSTQGTKYLSLSLH
KKKNSNKRVGEKADQEKKSKLIKIEENEVKREKKTIQLIEEEVPMENVVT
YGNGDQFEAKEIIFVESDEEVDDGNDKNYQVLYPRWNLRIQDMELISNGR
MLNDKVIMALQSILHKTYPNTYGLQDTVLGQTFAFLHVKEPFLQVLHTGG
AHWLAISTIGCEKDEVNLLDSSFNRSMTLHTKRQICCLLKTPASKLTIRS
VPVQQQTGGVDCGLFAISFIQHLAQTKMNPTEVWFDQGKMRNHALKCLRD
NILHPFPTKEPGKRRRRAAVREFKLDIFCVCRTIWSPSDARTKGKEMVEC
DECGKWFHRMCLNIPEFEGDTVEWECPECIKNNR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008234 | cysteine-type peptidase activity |
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0008234 |
cysteine-type peptidase activity |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 972..992 |
| None | No IPR available | GENE3D | 3.40.395.10 | | coord: 1091..1204
e-value: 7.7E-8
score: 31.6 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 1029..1198 |
| IPR001965 | Zinc finger, PHD-type | SMART | SM00249 | PHD_3 | coord: 1228..1280
e-value: 1.2E-9
score: 48.1 |
| IPR003653 | Ulp1 protease family, C-terminal catalytic domain | PFAM | PF02902 | Peptidase_C48 | coord: 1096..1191
e-value: 2.3E-4
score: 21.0 |
| IPR019787 | Zinc finger, PHD-finger | PFAM | PF00628 | PHD | coord: 1228..1281
e-value: 1.5E-8
score: 34.3 |
| IPR019787 | Zinc finger, PHD-finger | PROSITE | PS50016 | ZF_PHD_2 | coord: 1226..1282
score: 9.766 |
| IPR018289 | MULE transposase domain | PFAM | PF10551 | MULE | coord: 476..568
e-value: 6.7E-15
score: 55.2 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1212..1284
e-value: 1.2E-11
score: 43.8 |
| IPR007527 | Zinc finger, SWIM-type | PFAM | PF04434 | SWIM | coord: 767..797
e-value: 8.4E-5
score: 22.0 |
| IPR007527 | Zinc finger, SWIM-type | PROSITE | PS50966 | ZF_SWIM | coord: 766..802
score: 10.385 |
| IPR029309 | Calcium-responsive transcription factor | PFAM | PF15299 | ALS2CR8 | coord: 198..413
e-value: 9.9E-33
score: 113.8 |
| IPR019786 | Zinc finger, PHD-type, conserved site | PROSITE | PS01359 | ZF_PHD_1 | coord: 1229..1279 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 1224..1281 |
Blast
The following BLAST results are available for this feature:
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