TCONS_00003343-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003343-protein
Unique NameTCONS_00003343-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003343-protein ID=TCONS_00003343-protein|Name=TCONS_00003343-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MPSEAAKKRKEKKKNQGKAKPAAKTNGTEQTNGNAPNGNAPNGSLDNKFA
KIKLSNLSVSGVLASHPESRDLHLSTISLRYHGAELLTDASCELNSGRRY
GLLGPNGCGKSTLMEALASRELPIPRHFDIFHLQNEVEPSDKTALECVME
VDEERKLLEEEADELASRSDDEMAHDRLMDIYERLDELEAGTAEATACRL
LHGLGFTPIMQATKTRDFSGGTRMRVSLARALFVKPSILLLDEPTNHLDL
EACVWLEEELKTYKRILVLVSHSQDFLNGVCSNIITMAQKKLITYTGNFD
QYCITKSELEENQMKAYKREQDEIAHMKDYIARFGHGSAKLARQAQSKEK
TLAKMVEGGLTQKVETERSINFYFPDCGKLPPPVLAVNHISFGYREDRPL
IYKDLDFGMDLDTRIALVGPNGAGKSTLLKLLCGELTPTDGIVRTHQHLK
FGRFHQHLHEILEMDCSSLDWMLKTFPKEKDVEKMRKFLGRYGLTGKQQT
CPIGQLSDGQRSRVIFAWLSFQNPHMLLLDEPTNHLDIETIDALAEAINE
FDGGMVLVSHDFRLIMQVAKEIWVCEKGTVKKWKGDIFSYKKTLKEKVKA
DLKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001849XLOC_001849Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003343TCONS_00003343Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR032781ABC_tran_Xtn
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availableGENE3D3.40.50.300coord: 110..148
e-value: 0.011
score: 14.6
NoneNo IPR availableGENE3D3.40.50.300coord: 380..605
e-value: 7.5E-44
score: 149.7
NoneNo IPR availableGENE3D3.40.50.300coord: 53..109
e-value: 1.5E-6
score: 27.3
NoneNo IPR availableGENE3D3.40.50.300coord: 149..366
e-value: 1.8E-36
score: 125.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableCDDcd03221ABCF_EF-3coord: 385..579
e-value: 8.10896E-53
score: 177.641
NoneNo IPR availableCDDcd03221ABCF_EF-3coord: 72..291
e-value: 4.94059E-41
score: 144.514
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 411..579
e-value: 1.0E-8
score: 45.0
coord: 96..300
e-value: 1.8E-11
score: 54.1
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 87..246
e-value: 2.8E-20
score: 73.1
coord: 403..534
e-value: 6.1E-23
score: 81.7
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 72..314
score: 14.446
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 385..602
score: 15.28
IPR032781ABC-transporter extension domainPFAMPF12848ABC_tran_Xtncoord: 286..360
e-value: 1.4E-21
score: 76.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 367..581
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 66..144
coord: 187..307

Blast
[Close]
BLAST of TCONS_00003343-protein vs. Swiss-Prot (Human)
Match: ABCF2 (ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2 PE=1 SV=2)

HSP 1 Score: 767.303 bits (1980), Expect = 0.000e+0
Identity = 368/550 (66.91%), Postives = 450/550 (81.82%), Query Frame = 0 
Query:   49 FAKIKLSNLSVSGVLASHPESRDLHLSTISLRYHGAELLTDASCELNSGRRYGLLGPNGCGKSTLMEALASRELPIPRHFDIFHLQNEVEPSDKTALECVMEVDEERKLLEEEADELASRSDDEMAHDRLMDIYERLDELEAGTAEATACRLLHGLGFTPIMQATKTRDFSGGTRMRVSLARALFVKPSILLLDEPTNHLDLEACVWLEEELKTYKRILVLVSHSQDFLNGVCSNIITMAQKKLITYTGNFDQYCITKSELEENQMKAYKREQDEIAHMKDYIARFGHGSAKLARQAQSKEKTLAKMVEGGLTQKVETERSINFYFPDCGKLPPPVLAVNHISFGYREDRPLIYKDLDFGMDLDTRIALVGPNGAGKSTLLKLLCGELTPTDGIVRTHQHLKFGRFHQHLHEILEMDCSSLDWMLKTFPKEKDVEKMRKFLGRYGLTGKQQTCPIGQLSDGQRSRVIFAWLSFQNPHMLLLDEPTNHLDIETIDALAEAINEFDGGMVLVSHDFRLIMQVAKEIWVCEKGTVKKWKGDIFSYKKTLKEKV 598
            F   K +  +V+GVLASHP S D+H+  +SL +HG ELL+D   ELNSGRRYGL+G NG GKS L+ A+  RE+PIP H DI+HL  E+ PSDKT L CVMEVD ER +LE+EA+ LA    ++   ++LM++YERL+EL+A  AE  A R+LHGLGFTP MQ  K +DFSGG RMRV+LARALF++P +LLLDEPTNHLDL+ACVWLEEELKT+KRILVLVSHSQDFLNGVC+NII M  KKL  YTGN+DQY  T+ ELEENQMK +  EQD+IAHMK+YIARFGHGSAKLARQAQSKEKTL KM+  GLT++V ++++++FYFP CGK+PPPV+ V ++SF Y +D P IY +L+FG+DLDTR+ALVGPNGAGKSTLLKLL GEL PTDG++R H H+K GR+HQHL E L++D S L++M+K +P+ K+ E+MRK +GRYGLTGKQQ  PI  LSDGQ+ RV  AWL++QNPHML LDEPTNHLDIETIDALA+AINEF+GGM+LVSHDFRLI QVA+EIWVCEK T+ KW GDI +YK+ LK K+
Sbjct:   63 FEMKKAAARAVTGVLASHPNSTDVHIINLSLTFHGQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSDKTPLHCVMEVDTERAMLEKEAERLAH---EDAECEKLMELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLELEENQMKRFHWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMMASGLTERVVSDKTLSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKL 609
The following BLAST results are available for this feature:
BLAST of TCONS_00003343-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCF20.000e+066.91ATP-binding cassette sub-family F member 2 OS=Homo... [more]
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