Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003348-protein ID=TCONS_00003348-protein|Name=TCONS_00003348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=859bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00003348-protein vs. Swiss-Prot (Human)
Match: PCDP1 (Cilia- and flagella-associated protein 221 OS=Homo sapiens GN=CFAP221 PE=1 SV=2) HSP 1 Score: 374.015 bits (959), Expect = 1.641e-116 Identity = 250/782 (31.97%), Postives = 408/782 (52.17%), Query Frame = 0 Query: 28 VHNHLIDTKIYAAIGENELLHTRPSSIHFRGFQVGKKYTQKLRIVNASSECQRMLIVPPSSSNFQIQYQKKDS-LVPGMYLEVDVIFTPKTNEYQQDAIRIHSQTSSNLIVPIHAYLQINISSTFPSKINFRPTVVGQKSQKKIPLNNPTSVDFDFHVSFAEKHTSFVVEPSSGVIPANGHVLITLTYNPTEYCTSCAKLQVIVAQFNNQPHFCSLMGSSVPGLASKKKLEVLPEQVSEKILDPRTISPLERTRAKKKVADNTFK--SAKTTSQKT--IVKDGIQFSTNLNNTNAVNHVLMQKAGQMKAKELREVIRRKTEDDIEKEGGSHQMKEAVFEHLVGRNIAEEQRNQLRWCVRIGERDLEESTQSRVFNSRQQAEQEFQVFRRDGNLEAECNRSTTQTLTNQRIIRSANQH-ADATPTFDLYLNNEWDRRHRVLTKFIQATRKVIIRNRAKNNIQQL-TLHLDSWRR--GNFQSAISQKPKYDTNKELEIVEDVNT---VFNQENIKSFSFPEYQDPDKKTDMAIDALGSFDMSSTSVKVKRRIETYKLKVPQQYKTLSYSKHHLTNSVRKYIPKSFARTLRVGAESEIIQSDHGTTLNAPLTADRTTLDDIEPQSVTVKFSVPTKFLEPNVYHPLHIFNPLPGVQGHAQKMLYSEVDDDHKLC--PLVPRMTSNSNGE-------------DVVPGVMDWKKFPSQALMSISLPTLANCYLPRWSDPFGEDLCSSQTPSLMTSLPPDDVMDIDEHDEEYEEARIVPTLDMIRHEF 782 V NHL+++K+YA + N+++ RP IHF G+QV K++ Q L +VN S+E R+ I+PP + F+I Y +K+ LVPG+ L V V F+P Y D IR+H + L+VPIHAY +N S FPS IN ++G+ IPL VDF+F+++ + H +F +EP+SG+IPANG + +T+ + P +Y T+ K+Q+ ++QFN+QP+ C G+ P +A LP + E++ T+S +K + F AK QK I ++F +L+N AV VL Q+ G++K KELREV+ + TE I K + QMKEA+FE V ++I EE N L+W V +G+ + + + Q+A ++++ R D L+ E R T+ ++++R++R+ + + PTFD +NN W R R +F Q RKV+I+ R N + + + +S R G + +I+Q+ + I +D T + + + F+FP+ P ++A D LG + S+ V++K+ + L+VPQ YK Y + S Y P+ AR L+ GAE E+ TT+ A D TT + ++ + P Y PL++FNP PG+ + Y+E D+ LC P + +G D++PG+M WK F Q+L+ SLP + + D F + P+++ +LP +D ++ E + + ++ T +MI+ EF Sbjct: 39 VPNHLLESKVYAKLVNNKVIQARPGIIHFGGYQVEKQHQQILHLVNVSNEDTRVHILPPQTKYFEINYVRKEHHLVPGLSLTVTVTFSPDEWRYYYDCIRVHCKGDDTLLVPIHAYPVMN-SLDFPSFINLSNVLLGESKTYVIPLQCSCPVDFEFYITLIQSHQAFAIEPTSGIIPANGKMTVTIKFTPFQYGTAQIKMQLWISQFNSQPYECVFTGTCYPNMA-------LPLEEFERL---NTLSKKVNVPPEKAMMHINFHRPPAKPKPQKVKEIEYQNLRFPVDLSNPFAVATVLNQEPGKLKIKELREVLDQGTE--ISK---TRQMKEALFEQKVRQDIHEEMENHLKWQVHLGKDPMSFKLKKELTEEWQKACAKYKLDRGDPILDEEFQRLKTE-VSHKRVVRNQEEKIKEFHPTFDPLINNTWLSRSRAQKRFQQVARKVMIQGRLFNMLSAVREMDKESILRKIGQAKQSIAQEANFFKFFLRRISQDDYTSRFSVSPKEVLPFAFPDCSPPQDSNELAPDGLGLVPIKSSEVQIKQSYSFFNLQVPQLYKIKRYQPFSVHKSSTSYRPQKLARALKQGAEDEV------TTITALPKQDSTT--QLSGKTSVLSMKPPEALAMSLDYDPLYVFNPNPGLFAVMHPLTYAETLIDYHLCSHPKYKFTKESRHGSSIPVTQKQFLHHTDIIPGIMHWKSF--QSLVLSSLPDPSKMETTKSCDSFNSFMLPIDVPAILDALPEEDRLETVERELCEQNVEVMLTPEMIKVEF 793 The following BLAST results are available for this feature:
BLAST of TCONS_00003348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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