TCONS_00003348-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003348-protein
Unique NameTCONS_00003348-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length859

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003348-protein ID=TCONS_00003348-protein|Name=TCONS_00003348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=859bp
MEVEVGIKNSIWNDGISKFIKTPEPFPVHNHLIDTKIYAAIGENELLHTR
PSSIHFRGFQVGKKYTQKLRIVNASSECQRMLIVPPSSSNFQIQYQKKDS
LVPGMYLEVDVIFTPKTNEYQQDAIRIHSQTSSNLIVPIHAYLQINISST
FPSKINFRPTVVGQKSQKKIPLNNPTSVDFDFHVSFAEKHTSFVVEPSSG
VIPANGHVLITLTYNPTEYCTSCAKLQVIVAQFNNQPHFCSLMGSSVPGL
ASKKKLEVLPEQVSEKILDPRTISPLERTRAKKKVADNTFKSAKTTSQKT
IVKDGIQFSTNLNNTNAVNHVLMQKAGQMKAKELREVIRRKTEDDIEKEG
GSHQMKEAVFEHLVGRNIAEEQRNQLRWCVRIGERDLEESTQSRVFNSRQ
QAEQEFQVFRRDGNLEAECNRSTTQTLTNQRIIRSANQHADATPTFDLYL
NNEWDRRHRVLTKFIQATRKVIIRNRAKNNIQQLTLHLDSWRRGNFQSAI
SQKPKYDTNKELEIVEDVNTVFNQENIKSFSFPEYQDPDKKTDMAIDALG
SFDMSSTSVKVKRRIETYKLKVPQQYKTLSYSKHHLTNSVRKYIPKSFAR
TLRVGAESEIIQSDHGTTLNAPLTADRTTLDDIEPQSVTVKFSVPTKFLE
PNVYHPLHIFNPLPGVQGHAQKMLYSEVDDDHKLCPLVPRMTSNSNGEDV
VPGVMDWKKFPSQALMSISLPTLANCYLPRWSDPFGEDLCSSQTPSLMTS
LPPDDVMDIDEHDEEYEEARIVPTLDMIRHEFHTQDILSSLETTSFDSNT
QLNDSLQNATSHLPQLGNSGHLQRDGIQTTLDAFLKSKQNALGERMKSRV
QNLQSDWSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001852XLOC_001852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003348TCONS_00003348Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 859..859
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 41..136
e-value: 3.1E-9
score: 36.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 145..248
e-value: 5.6E-15
score: 55.0

Blast
BLAST of TCONS_00003348-protein vs. Swiss-Prot (Human)
Match: PCDP1 (Cilia- and flagella-associated protein 221 OS=Homo sapiens GN=CFAP221 PE=1 SV=2)

HSP 1 Score: 374.015 bits (959), Expect = 1.641e-116
Identity = 250/782 (31.97%), Postives = 408/782 (52.17%), Query Frame = 0
Query:   28 VHNHLIDTKIYAAIGENELLHTRPSSIHFRGFQVGKKYTQKLRIVNASSECQRMLIVPPSSSNFQIQYQKKDS-LVPGMYLEVDVIFTPKTNEYQQDAIRIHSQTSSNLIVPIHAYLQINISSTFPSKINFRPTVVGQKSQKKIPLNNPTSVDFDFHVSFAEKHTSFVVEPSSGVIPANGHVLITLTYNPTEYCTSCAKLQVIVAQFNNQPHFCSLMGSSVPGLASKKKLEVLPEQVSEKILDPRTISPLERTRAKKKVADNTFK--SAKTTSQKT--IVKDGIQFSTNLNNTNAVNHVLMQKAGQMKAKELREVIRRKTEDDIEKEGGSHQMKEAVFEHLVGRNIAEEQRNQLRWCVRIGERDLEESTQSRVFNSRQQAEQEFQVFRRDGNLEAECNRSTTQTLTNQRIIRSANQH-ADATPTFDLYLNNEWDRRHRVLTKFIQATRKVIIRNRAKNNIQQL-TLHLDSWRR--GNFQSAISQKPKYDTNKELEIVEDVNT---VFNQENIKSFSFPEYQDPDKKTDMAIDALGSFDMSSTSVKVKRRIETYKLKVPQQYKTLSYSKHHLTNSVRKYIPKSFARTLRVGAESEIIQSDHGTTLNAPLTADRTTLDDIEPQSVTVKFSVPTKFLEPNVYHPLHIFNPLPGVQGHAQKMLYSEVDDDHKLC--PLVPRMTSNSNGE-------------DVVPGVMDWKKFPSQALMSISLPTLANCYLPRWSDPFGEDLCSSQTPSLMTSLPPDDVMDIDEHDEEYEEARIVPTLDMIRHEF 782
            V NHL+++K+YA +  N+++  RP  IHF G+QV K++ Q L +VN S+E  R+ I+PP +  F+I Y +K+  LVPG+ L V V F+P    Y  D IR+H +    L+VPIHAY  +N S  FPS IN    ++G+     IPL     VDF+F+++  + H +F +EP+SG+IPANG + +T+ + P +Y T+  K+Q+ ++QFN+QP+ C   G+  P +A       LP +  E++    T+S       +K +    F    AK   QK   I    ++F  +L+N  AV  VL Q+ G++K KELREV+ + TE  I K   + QMKEA+FE  V ++I EE  N L+W V +G+  +    +  +    Q+A  ++++ R D  L+ E  R  T+ ++++R++R+  +   +  PTFD  +NN W  R R   +F Q  RKV+I+ R  N +  +  +  +S  R  G  + +I+Q+  +       I +D  T     + + +  F+FP+   P    ++A D LG   + S+ V++K+    + L+VPQ YK   Y    +  S   Y P+  AR L+ GAE E+      TT+ A    D TT   +  ++  +    P        Y PL++FNP PG+      + Y+E   D+ LC  P       + +G              D++PG+M WK F  Q+L+  SLP  +     +  D F   +     P+++ +LP +D ++  E +   +   ++ T +MI+ EF
Sbjct:   39 VPNHLLESKVYAKLVNNKVIQARPGIIHFGGYQVEKQHQQILHLVNVSNEDTRVHILPPQTKYFEINYVRKEHHLVPGLSLTVTVTFSPDEWRYYYDCIRVHCKGDDTLLVPIHAYPVMN-SLDFPSFINLSNVLLGESKTYVIPLQCSCPVDFEFYITLIQSHQAFAIEPTSGIIPANGKMTVTIKFTPFQYGTAQIKMQLWISQFNSQPYECVFTGTCYPNMA-------LPLEEFERL---NTLSKKVNVPPEKAMMHINFHRPPAKPKPQKVKEIEYQNLRFPVDLSNPFAVATVLNQEPGKLKIKELREVLDQGTE--ISK---TRQMKEALFEQKVRQDIHEEMENHLKWQVHLGKDPMSFKLKKELTEEWQKACAKYKLDRGDPILDEEFQRLKTE-VSHKRVVRNQEEKIKEFHPTFDPLINNTWLSRSRAQKRFQQVARKVMIQGRLFNMLSAVREMDKESILRKIGQAKQSIAQEANFFKFFLRRISQDDYTSRFSVSPKEVLPFAFPDCSPPQDSNELAPDGLGLVPIKSSEVQIKQSYSFFNLQVPQLYKIKRYQPFSVHKSSTSYRPQKLARALKQGAEDEV------TTITALPKQDSTT--QLSGKTSVLSMKPPEALAMSLDYDPLYVFNPNPGLFAVMHPLTYAETLIDYHLCSHPKYKFTKESRHGSSIPVTQKQFLHHTDIIPGIMHWKSF--QSLVLSSLPDPSKMETTKSCDSFNSFMLPIDVPAILDALPEEDRLETVERELCEQNVEVMLTPEMIKVEF 793          
The following BLAST results are available for this feature:
BLAST of TCONS_00003348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCDP11.641e-11631.97Cilia- and flagella-associated protein 221 OS=Homo... [more]
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