TCONS_00003415-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003415-protein
Unique Name	TCONS_00003415-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	630

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003415-protein ID=TCONS_00003415-protein|Name=TCONS_00003415-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
LQISLKTLPFYADYFGIKYPLPKMDLIAIPDFAAGAMENWGLVTYRETCL
LVDEKETSITAKQWVALVVGHEIAHQWFGNLTTMEWWTDLWLNEGFASWI
EYLCVDFCCPDFHIWKQFVSTDYTKALELDALKNSHPIEVEVKNPAEIDE
IFDAISYSKGASVIRMLHNWIGEKDFKSGLHSYLTTFSYKNGKTKDLWHH
LQMKSGKPVSTVMNTWTSQMGYPVISVCDEHTKDGSRILTLDAKKFNSDG
SQEGSDAKWDVPIWVATKSSKGESCYDTLVNGNDFPMNLHIQGCQQDDWI
KLNPGQVGFYRINYSPEMLQRLIPSIQSLGSVDRLGLESDLFALAYSGYT
TTNNFLDILNGYRSENDFVVWSNIDQNLSCLGILLQNTDHYENYKKFVLS
FFKPLADKLGWEPQEGESPLTGMLRGKAIRRLGLCGDADVVAKCQQMFQA
HVDGSESIPADLRDAVYCTVSRNGDEETFNNMVKLYNDTTHMEEQGRLVR
VLGFNQDEAIIQKALDFCMSDKVRSGDTVFALAGCTGSLLGRRMTWRTVK
DNWEELYGRYQGGFLLSRLIKISTENFVTQEEEDDVTNFFSGKEVPAAER
VIRQSIESIQCNKRWLARDKDVIIDWLSKN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001909	XLOC_001909	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003415	TCONS_00003415	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014782	Peptidase_M1_N
IPR024571	ERAP1-like_C_dom
IPR034016	M1_APN-typ

Vocabulary: **Molecular Function**
Term	Definition
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal	PRINTS	PR00756	ALADIPTASE	coord: 68..83 score: 67.52 coord: 87..99 score: 68.68 coord: 32..42 score: 80.19
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal	PFAM	PF01433	Peptidase_M1	coord: 2..216 e-value: 2.3E-88 score: 295.4
IPR024571	ERAP1-like C-terminal domain	PFAM	PF11838	ERAP1_C	coord: 299..610 e-value: 1.2E-86 score: 291.0
None	No IPR available	GENE3D	1.10.390.10		coord: 54..220 e-value: 1.4E-56 score: 190.6
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 3..227
IPR034016	Aminopeptidase N-type	CDD	cd09601	M1_APN_2	coord: 1..223 e-value: 1.04008E-143 score: 426.98

Blast

[Close]

BLAST of TCONS_00003415-protein vs. Swiss-Prot (Human)
Match: PSA (Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2)

HSP 1 Score: 679.478 bits (1752), Expect = 0.000e+0
Identity = 331/631 (52.46%), Postives = 434/631 (68.78%), Query Frame = 0

Query:    1 LQISLKTLPFYADYFGIKYPLPKMDLIAIPDFAAGAMENWGLVTYRETCLLVDEKETSITAKQWVALVVGHEIAHQWFGNLTTMEWWTDLWLNEGFASWIEYLCVDFCCPDFHIWKQFVSTDYTKALELDALKNSHPIEVEVKNPAEIDEIFDAISYSKGASVIRMLHNWIGEKDFKSGLHSYLTTFSYKNGKTKDLWHHLQMKSGKPVSTVMNTWTSQMGYPVISVCDEHTKDGSRILTLDAKKFNSDGSQEGSD-AKWDVPIWVATKSSKGESCYDTLVNGNDFPMNLHIQGCQQDDWIKLNPGQVGFYRINYSPEMLQRLIPSIQ--SLGSVDRLGLESDLFALAYSGYTTTNNFLDILNGYRSENDFVVWSNIDQNLSCLGILLQNTDHYENYKKFVLSFFKPLADKLGWEPQEGESPLTGMLRGKAIRRLGLCGDADVVAKCQQMFQAHVDGSESIPADLRDAVYCTVSRNGDEETFNNMVKLYNDTTHMEEQGRLVRVLGFNQDEAIIQKALDFCMSDKVRSGDTVFALAGCT-GSLLGRRMTWRTVKDNWEELYGRYQGGFLLSRLIKISTENFVTQEEEDDVTNFFSGKEVPAAERVIRQSIESIQCNKRWLARDKDVIIDWL 627
            L+++ KTLPFY DYF + YPLPK+DLIAI DFAAGAMENWGLVTYRET LL+D K +  +++QWVALVVGHE+AHQWFGNL TMEWWT LWLNEGFASWIEYLCVD C P++ IW QFVS DYT+A ELDAL NSHPIEV V +P+E+DEIFDAISYSKGASVIRMLH++IG+KDFK G++ YLT F  KN  T+DLW  L+  SGKP++ VMNTWT QMG+P+I V  E  +D  R+L L  KKF + GS  G D  +W VPI ++T     ++    L++  +  MN+ ++  + D W+KLN G VGFYR  YS  ML+ L+P I+  SL  VDRLGL++DLF+LA +G  +T   L ++  + +E ++ VWS++  NL  L  LL +TD YE  ++FV   F P+ ++LGW+P+ GE  L  +LRG  + +LG  G    + + ++ F+ HV+G + + ADLR  VY TV ++GD  T + M+KL+      EE+ R+ RVLG      +IQK L F +S++VR  DTV  + G   GS  GR+  W+ +KDNWEELY RYQGGFL+SRLIK+S E F   +   +V  FF     P+AER I+Q  E+I  N  WL RD + I  +L
Sbjct:  282 LEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVED-DRLLRLSQKKFCAGGSYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPE--MNVVLKNVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLLPDLIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYL 909

The following BLAST results are available for this feature:

BLAST of TCONS_00003415-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003415-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PSA	0.000e+0	52.46	Puromycin-sensitive aminopeptidase OS=Homo sapiens...	[more]

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TCONS_00003415-protein (polypeptide) - C. hemisphaerica