TCONS_00003475-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003475-protein
Unique NameTCONS_00003475-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003475-protein ID=TCONS_00003475-protein|Name=TCONS_00003475-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MEENEKENRFPSIFNNAGTAIANVGKMSGTAIADRAGRIGGTVANFARKT
KKKSQQSLSDSLTIEEINEYKQAFALYDRNSNGTINQNELLSVLRSLGQN
PTEQEVQDIINEMDANKNGKIEFQEFLEKMAERNERNDMSEDLRNAFRVF
DANGDGRISVEELRHVMVNLGDPLTDEEVDEMMREADKDNDGYVDYEEFV
TMMTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001932XLOC_001932Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003475TCONS_00003475Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 105..133
e-value: 1.6E-5
score: 34.3
coord: 69..97
e-value: 1.7E-5
score: 34.3
coord: 142..170
e-value: 4.0E-7
score: 39.7
coord: 178..205
e-value: 9.8E-6
score: 35.0
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 141..203
e-value: 1.8E-17
score: 63.4
coord: 70..130
e-value: 3.1E-16
score: 59.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 174..205
score: 13.509
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 16.382
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 65..100
score: 14.486
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 101..136
score: 13.007
IPR002048EF-hand domainCDDcd00051EFhcoord: 142..204
e-value: 7.0403E-23
score: 87.2181
IPR002048EF-hand domainCDDcd00051EFhcoord: 69..131
e-value: 2.42702E-18
score: 74.8917
NoneNo IPR availableGENE3D1.10.238.10coord: 119..157
e-value: 1.8E-21
score: 75.2
NoneNo IPR availableGENE3D1.10.238.10coord: 96..118
e-value: 8.3E-17
score: 60.6
NoneNo IPR availableGENE3D1.10.238.10coord: 57..95
e-value: 2.1E-15
score: 55.9
NoneNo IPR availableGENE3D1.10.238.10coord: 158..205
e-value: 6.5E-24
score: 83.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 187..199
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 151..163
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 78..90
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 114..126
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 58..204

Blast
[Close]
BLAST of TCONS_00003475-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.772e-60
Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 0 
Query:   58 LSDSLTIEEINEYKQAFALYDRNSNGTINQNELLSVLRSLGQNPTEQEVQDIINEMDANKNGKIEFQEFLEKMAERNERNDMSEDLRNAFRVFDANGDGRISVEELRHVMVNLGDPLTDEEVDEMMREADKDNDGYVDYEEFVTMMT 204
            ++D LT E+I E+K+AF+L+D++ +GTI   EL +V+RSLGQNPTE E+QD+INE+DA+ NG I+F EFL  MA + +  D  E++R AFRVFD +G+G IS  ELRHVM NLG+ LTDEEVDEM+READ D DG V+YEEFV MMT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00003475-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.772e-6061.22Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
back to top