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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003509-protein ID=TCONS_00003509-protein|Name=TCONS_00003509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
MRYEQKRFQSFSLCDPYNKHWPSNERLASAGFYFKDKKVGMKCFCCDVAI
EKWECAEQCPMTKHRALSSKCRFVIGSFCGNIPVGQESVHVGVPIAQQKP
TQPPRTSAPGLHFVHGKLQHEVQRPCNGSYNLNPREHVPNRTPNRYDSFD
EPSFMISVPPVGEVNGMKRDNRIQPEHLPQYQSTLPHHQPSLNVGHPSLY
KGTPTMTHHQNDMTCPSNGLTKYYQESQRLKTFFTWPKESLISGIALAKA
GFFYTNKNDVVECCMCSLTVGDWMPGDDPMRIHLQRRRNCPFLMNSNRAL
QHRHPAPQNMYNRLNQQINKNHQKQQSPKNQHQHFAINTPRIKHLPLNGI
SQQGFMNPNPQRYPHTSPSPQSPTFNTHQYQMSYQTPFSPHLSYSHVHNK
PIQYERNYDNTIPTLSTRHPQNQQKILDPTPGGQEIRLPQNTDEILQIHK
ANQERARIAYEEAQKEKHNSNRNLCKICQDNTVTITLVPCGHLVLCESCA
LGMFMCPVCRTEITKTIRTFFDGN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 446..473 |
| None | No IPR available | GENE3D | 1.10.1170.10 | | coord: 214..346
e-value: 1.7E-26
score: 92.3 |
| None | No IPR available | GENE3D | 1.10.1170.10 | | coord: 1..108
e-value: 5.9E-17
score: 61.4 |
| None | No IPR available | PFAM | PF13920 | zf-C3HC4_3 | coord: 472..515
e-value: 2.5E-12
score: 46.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 357..377 |
| None | No IPR available | SUPERFAMILY | 57924 | Inhibitor of apoptosis (IAP) repeat | coord: 1..85 |
| None | No IPR available | SUPERFAMILY | 57924 | Inhibitor of apoptosis (IAP) repeat | coord: 221..296
coord: 460..496 |
| IPR001370 | BIR repeat | SMART | SM00238 | bir_2 | coord: 224..295
e-value: 3.2E-19
score: 79.9
coord: 2..76
e-value: 8.6E-10
score: 48.5 |
| IPR001370 | BIR repeat | PFAM | PF00653 | BIR | coord: 229..293
e-value: 8.2E-17
score: 61.6
coord: 7..74
e-value: 9.5E-12
score: 45.3 |
| IPR001370 | BIR repeat | PROSITE | PS01282 | BIR_REPEAT_1 | coord: 226..293 |
| IPR001370 | BIR repeat | PROSITE | PS50143 | BIR_REPEAT_2 | coord: 7..75
score: 13.514 |
| IPR001370 | BIR repeat | PROSITE | PS50143 | BIR_REPEAT_2 | coord: 229..294
score: 18.658 |
| IPR001370 | BIR repeat | CDD | cd00022 | BIR | coord: 229..295
e-value: 1.25632E-20
score: 85.0099 |
| IPR001370 | BIR repeat | CDD | cd00022 | BIR | coord: 5..74
e-value: 4.7947E-14
score: 66.5203 |
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 475..509
e-value: 6.4E-4
score: 29.0 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 475..510
score: 11.309 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 475..513
e-value: 3.53261E-5
score: 40.5068 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 447..522
e-value: 2.7E-9
score: 35.9 |
Blast
The following BLAST results are available for this feature:
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