TCONS_00003862-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003862-protein
Unique NameTCONS_00003862-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length660

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003862-protein ID=TCONS_00003862-protein|Name=TCONS_00003862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=660bp
MIINRKIAMSFGIICSMKSISKFAGVRYFAATTTNHGTSWSQKWFKNVQL
KSPVFYCDANDIEVMKDPHEFYNSLKELSSNAKERITLASLYLGNGKLEK
DLVDIIYKTMDNASQPIKCNVLLEYTRGSRGSNNSRTMLLPIVNKFTKDT
NVALFHTPNLRGLLRKIVPERFNETINVSHLKVYLFDDTLIISGANLSND
YFTNRQDRYIMFKNNKQLCDYFDDLVQTISQFSFQLTPHDTVKMKDNFPF
HPYKSRKKDFNKAAERLLKDFILKYSTRREIFDGNCVERLTCTAGTELPK
DQHSTLKKNNKDTLIFPLLQMKTMGIDQDEEVTSNIISFAPPPSQLVLAT
AYFNLTDRYWDAVCENDSENRLIMAHPKAMGFYKAPGMAGGIPNAYSLIA
LRRYRQLQNNRQTDKTKFYEFHHPGWTFHGKGLWGILSDVKNAPIVTLIG
SPNFGKRSVYRDMEAQVAIVTVNKQLKEDLIEERDSFFENTTLVSRQTFN
DKERAPSWWVWDKDAPIQLSLTQAPKQLPIQNNATLHISAGVQIKNYTVP
RNIRVEVDVSKKILFWVKIPCFGCDFSLSCDKMPEICMVNDFCKDCSVNV
RNIKVRMPADIEQQLPRFLPNFVINGHYWARLRLINKDKPKETVACIEVE
TDVKSHAKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002169XLOC_002169Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003862TCONS_00003862Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025202PLD-like_dom
IPR001736PLipase_D/transphosphatidylase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025202Phospholipase D-like domainPFAMPF13091PLDc_2coord: 77..224
e-value: 3.0E-7
score: 30.3
NoneNo IPR availableGENE3D3.30.870.10coord: 50..272
e-value: 1.6E-18
score: 66.3
NoneNo IPR availableGENE3D3.30.870.10coord: 321..498
e-value: 2.4E-7
score: 29.7
NoneNo IPR availableGENE3D2.70.220.10coord: 511..656
e-value: 1.5E-10
score: 40.7
NoneNo IPR availableCDDcd09135PLDc_PGS1_euk_1coord: 61..229
e-value: 1.25075E-84
score: 264.411
NoneNo IPR availableCDDcd09137PLDc_PGS1_euk_2coord: 313..499
e-value: 3.96083E-71
score: 229.386
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 50..227
IPR001736Phospholipase D/TransphosphatidylasePROSITEPS50035PLDcoord: 175..201
score: 9.92

Blast
[Close]
BLAST of TCONS_00003862-protein vs. Swiss-Prot (Human)
Match: PGPS1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial OS=Homo sapiens GN=PGS1 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 1.983e-120
Identity = 194/475 (40.84%), Postives = 296/475 (62.32%), Query Frame = 0 
Query:   43 KWFKNVQLKSPVFYCDANDIEVMKDPHEFYNSLKELSSNAKERITLASLYLGNGKLEKDLVDIIYKTMDNASQP-----IKCNVLLEYTRGSRGSNNSRTMLLPIVNKFTKDTNVALFHTPNLRGLLRKIVPERFNETINVSHLKVYLFDDTLIISGANLSNDYFTNRQDRYIMFKNNKQLCDYFDDLVQTISQFSFQLTPHDTVKMKDNFPFHPYKSRKKDFNKAAERLLKDFILKYSTRREIFDGNCVERLTCTAGTELPKDQHSTL--KKNNKDTLIFPLLQMKTMGIDQDEEVTSNIISFAPPPSQLVLATAYFNLTDRYWDAVCENDSENRLIMAHPKAMGFYKAPGMAGGIPNAYSLIALRRYRQLQNNRQTDKTKFYEFHHPGWTFHGKGLWGILSDVKNAPIVTLIGSPNFGKRSVYRDMEAQVAIVTVNKQLKEDLIEERDSFFENTTLVSRQTFNDKERAPSWWV 510
            +W +N+    P F   ++ + V+  P EF+  +K     AK R+ +ASLYLG G LE++LVD +  T++ + Q      +K ++LL++TRGSRG  NSRTMLLP++ +F +   V+LFHTP+LRGLLR ++PERFNETI + H+KVYLFD+++I+SGANLS+ YFTNRQDRY+  ++  ++ D+F +LV  +   S QL   DTV++ D    HPYK  + ++ KAA + + D I    TR+++         T  + + L ++  +    ++   DT I+PL+QMK   I  DE VT  +++ A   +++ L T YFNLT  Y D V    +E ++++A P+  GF+ A G+AG IP AY  I  + + ++ +  Q ++ +  E+   GWTFH KGLW  L+   + P +TLIGSPNFG RSV+RD+EAQ+AIVT N+ L++ L +E++  +  + +VS  TF    R    WV
Sbjct:   81 QWIRNL---VPEFGVSSSHVRVLSSPAEFFELMKGQIRVAKRRVVMASLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSILLDFTRGSRGRKNSRTMLLPLLRRFPEQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDSYFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQLQGDDTVQVVDGM-VHPYKGDRAEYCKAANKRVMDVINSARTRQQMLHAQ-----TFHSNSLLTQEDAAAAGDRRPAPDTWIYPLIQMKPFEIQIDEIVTETLLTEAERGAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFGAKGVAGAIPAAYVHIERQFFSEVCSLGQQERVQLQEYWRRGWTFHAKGLWLYLAG-SSLPCLTLIGSPNFGYRSVHRDLEAQIAIVTENQALQQQLHQEQEQLYLRSGVVSSATFEQPSRQVKLWV 545
The following BLAST results are available for this feature:
BLAST of TCONS_00003862-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PGPS11.983e-12040.84CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
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