TCONS_00003994-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003994-protein
Unique NameTCONS_00003994-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length231

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003994-protein ID=TCONS_00003994-protein|Name=TCONS_00003994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
MAHEQKKNILITGVTKGIGLAMTSWFAKNGHSVYGCGRNVDAIRKLNESE
WASKSNFQSVDTSSAKGVQDWIKVVIEKAGSLDLVINNAAISGKPGPLWE
ISVEDFDKLIDINIKGINYVIHSVLPHMLEANKGVIINLSSGWGRSTAAG
MAPYCCSKWAIEGLSLALAKDLPSPLACAPLNPGMINTEMLEGIFSEDAS
MSRTPEQWIQTAGPFLLSLDRSCNGQRLTAP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002243XLOC_002243Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003994TCONS_00003994Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 80..91
score: 45.68
coord: 134..142
score: 51.92
coord: 154..173
score: 34.06
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 8..25
score: 38.38
coord: 154..173
score: 33.35
coord: 174..191
score: 22.9
coord: 80..91
score: 47.55
coord: 128..144
score: 35.86
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 7..196
e-value: 8.0E-42
score: 142.8
NoneNo IPR availableGENE3D3.40.50.720coord: 6..217
e-value: 1.7E-47
score: 161.5
NoneNo IPR availableCDDcd05233SDR_ccoord: 9..230
e-value: 3.57053E-47
score: 156.675
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 141..169
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 5..228

Blast
[Close]
BLAST of TCONS_00003994-protein vs. Swiss-Prot (Human)
Match: DHRS4 (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.409e-16
Identity = 55/186 (29.57%), Postives = 94/186 (50.54%), Query Frame = 0 
Query:    7 KNILITGVTKGIGLAMTSWFAKNGHSVYGCGR---NVDAIRKLNESEWASKSNFQSVDTSSAKGVQDWIKVVIEKAGSLDLVINNAAISGKPGPLWEISVEDFDKLIDINIKGINYVIHSVLPHMLEANKGVIINLSSGWGRSTAAGMAPYCCSKWAIEGLSLALAKDL-PSPLACAPLNPGMINT 188
            K  L+T  T GIG A+    A++G  V    R   NVD      + E  S +         A+  +  +   ++  G +D++++NAA++   G + +++ E +DK +DIN+K    +  +V+P M +   G ++ +SS    S + G +PY  SK A+ GL+  LA +L P  +    L PG+I T
Sbjct:   33 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG-TVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKT 217
The following BLAST results are available for this feature:
BLAST of TCONS_00003994-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHRS43.409e-1629.57Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
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