TCONS_00004131-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004131-protein
Unique NameTCONS_00004131-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length483

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004131-protein ID=TCONS_00004131-protein|Name=TCONS_00004131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=483bp
DLEHIFGINVSLLKESMATKIAFNSDDKIVDQNACVEQINVKDLEKYFDV
DKIVQYILQGKYSVIALQFPDELMTYSTSIASELKSKTEAQIFVLADTSY
GSCCVDEVAASHYNADLIIHFGQSCLSNTGKIAVYYSFGKELIDIDVLLS
KLGERFTPDDKILVLYDVQYDYPINSNLDVVKKNFQNASISCLNLCNSSE
IADNVTIKFGRVYTLTHSIEEYTLVFIGSNERTLYNTIVSYPRNTVYSYD
VKLEKLQKEDLNVNKYLMRRFYLIEKAKDAQIVGIVMGTLGVARYNDMVN
RLKSILKQSGKKFYTFIIGKINPAKLANFMEIDMFVLVACPENSLLDSKE
FYKPIITPYEMEMACLSGRSWSGDVVTDFRELLSGSKRFVELDGENDGKD
KKPEYSLITGKLRNNNTMSEPLCTDVATRNESNSLVASSARNASEYLASR
TWQGLQIDSGKTEVKLAVEGRSGIAMNYKNEKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002298XLOC_002298Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004131TCONS_00004131Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010014DHP2_eu
IPR016435DPH1/DPH2
Vocabulary: Biological Process
TermDefinition
GO:0017183peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010014Diphthamide synthesis DHP2, eukaryoticTIGRFAMTIGR00272TIGR00272coord: 27..479
e-value: 3.1E-109
score: 363.8
IPR016435Diphthamide synthesis DPH1/DPH2PFAMPF01866Diphthamide_syncoord: 69..374
e-value: 3.1E-95
score: 319.0
IPR016435Diphthamide synthesis DPH1/DPH2TIGRFAMTIGR00322TIGR00322coord: 47..365
e-value: 9.5E-103
score: 341.9
IPR016435Diphthamide synthesis DPH1/DPH2SFLDSFLDS00032Radical_SAM_3-amino-3-carboxycoord: 22..482
e-value: 0.0
score: 446.1

Blast
[Close]
BLAST of TCONS_00004131-protein vs. Swiss-Prot (Human)
Match: DPH2 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Homo sapiens GN=DPH2 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.040e-70
Identity = 141/471 (29.94%), Postives = 247/471 (52.44%), Query Frame = 0 
Query:   40 NVKDLEKYFDVDKIVQYILQGKYSVIALQFPDELMTYSTSIASELKSKTEAQIFVLADTSYGSCCVDEVAASHYNADLIIHFGQSCLSNTGK-IAVYYSFGKELIDIDVLLSKLGERFTPDDK--ILVLYDVQYDYPINSNLDVVKKNFQNASISCLNLCNS--SEIADNVTI-KFGRVYTLTHS--IEEYTLVFIGSNERT--------LYNTIVSY-PRNTVYSYDVKLEKLQKEDLNVNKYLMRRFYLIEKAKDAQIVGIVMGTLGVARYNDMVNRLKSILKQSGKKFYTFIIGKINPAKLANFMEIDMFVLVACPENSLLD--SKEFYKPIITPYEMEMACLSGRSWSG--DVVTDFRELLSGSKRFVELDGENDGKDKKPEYSLITGKLRNNNTMSEPLCTDVATRNESNSLVASS--------ARNASEYLASRTWQGLQIDSGKTEVKLAVEGRSGIAMNYKNE 481
             + DL+  ++++++  ++       +ALQFPD+L+  + ++A+ L+  T +++F+L DT+YGSCCVD + A    A  +IHFG +CLS   + + V +   +  + ++ L  K  E   PD K  +++L +    + + +   +++  + +  +S         S   + + + +FGR + L     +EEY   ++G ++ +        L   ++ + P     S      K Q E     +   RR YL+E+A+DA++VG++ GTLGVA++ + +  L+++ + +GK+ Y   +G+  PAKLANF E+D+FVL+ACP  +L    S  F++PI+ P E+E AC       G    +T + +LL GS   V L        + P+ SLITG LR              + N+  SL  +         +  A+ +L+SR+WQGL+   G+T V  AV GR GIA+ Y++E
Sbjct:   25 PLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLGDAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPVAFVLRQRSVALE-LCVKAFEAQNPDPKAPVVLLSEPACAHALEALATLLRPRYLDLLVSSPAFPQPVGSLSPEPMPLERFGRRFPLAPGRRLEEYGAFYVGGSKASPDPDLDPDLSRLLLGWAPGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVAQHREALAHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPPPAWK--------SSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVTEAVSGRRGIAIAYEDE 486
The following BLAST results are available for this feature:
BLAST of TCONS_00004131-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPH22.040e-7029.942-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
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