TCONS_00004361-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004361-protein
Unique NameTCONS_00004361-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length406

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004361-protein ID=TCONS_00004361-protein|Name=TCONS_00004361-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MSLTEMIFVGILCSFLSLTKSGKVKVVDAPFSFNNPIGSNPGTQNQEKKL
ILRFNPEKPSGPPFLIEKLNGKCFDLMHNNYKYQFCPFHNITQREQTYRW
NSYHGVLGVWKHWTIEKSLFTQMEMHHGDVCHGTQERQVFVVLQCGEENK
ILSVTEPETCKYKLIFKTPYVCPKDVFHVLPVLSKTSRQKWSKIENDFKN
GLLTKIGYDKRINAILSEEGLIINDRKILQQQATVPSILTDDKRPARPNS
YVETGNGKNVTVRDITNSFISRHQCVQAFENLYSEVSDLRNQLKLYQELD
KNTNSTQDLTNKDFKSTRAEKYKRGELGEKGLQNNKQNGRISNKIDLTNT
EDKKGVNSQEQSKTKEETIENPATLHSKQRGDDGLIDEDNNPLRHLQDRI
HEKEEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002438XLOC_002438Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004361TCONS_00004361Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009011Man6P_isomerase_rcpt-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 279..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..406
IPR009011Mannose-6-phosphate receptor binding domainGENE3D2.70.130.10coord: 69..176
e-value: 1.1E-16
score: 61.3
IPR009011Mannose-6-phosphate receptor binding domainPFAMPF13015PRKCSH_1coord: 51..177
e-value: 2.5E-14
score: 53.2
IPR009011Mannose-6-phosphate receptor binding domainSUPERFAMILY50911Mannose 6-phosphate receptor domaincoord: 71..173

Blast
BLAST of TCONS_00004361-protein vs. Swiss-Prot (Human)
Match: GNPTG (N-acetylglucosamine-1-phosphotransferase subunit gamma OS=Homo sapiens GN=GNPTG PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.136e-51
Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 0
Query:   23 KVKVVDAP--FSFNNPIGSNPGTQNQEKKLILRFNPEKPSGPPFLIEKLNGKCFDLMHNNYKYQFCPFHNITQREQTYRWNSYHGVLGVWKHWTIEKSLFTQMEMHHGDVCHGTQERQVFVVLQCGEENKILSVTEPETCKYKLIFKTPYVCPKDVFHVLPVLSKTSRQKWSKIENDFKNGLLTKIGYDKRINAILSEEGLI 222
            K+KVV+ P  F  NNP         Q  +L  + +P   SGP  L  +L+GKCF L+ + YKY+FCPFHN+TQ EQT+RWN+Y G+LG+W  W I  + FT M M  GD C  ++ RQ  V L CG+ N++  V+EP TC Y L F+TP VC      V P L +  +++W ++E D  + L+T  G++K +  +  + G +
Sbjct:   26 KMKVVEEPNAFGVNNPF------LPQASRLQAKRDPSPVSGPVHLF-RLSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWEIANNTFTGMWMRDGDACR-SRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTLPEALQRQWDQVEQDLADELITPQGHEKLLRTLFEDAGYL 219          
The following BLAST results are available for this feature:
BLAST of TCONS_00004361-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNPTG2.136e-5141.09N-acetylglucosamine-1-phosphotransferase subunit g... [more]
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