TCONS_00004480-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004480-protein
Unique NameTCONS_00004480-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004480-protein ID=TCONS_00004480-protein|Name=TCONS_00004480-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
LISENSFQAFYESKMVLVNKIALGLLPCGILTSLVIIGFIFYQDDFTRIH
GHLLRVSRSRRFITHHTFTKTTNTSVKTEKAYKEGARKILQIHGDKNLYF
SLRNFTVELSQRFQHLMEIKNKEEEGWERKKKEEIERYEIQQLHSRNLKG
YSECRSQLNIVFLKTHKTGSSTLTNILNRFADINNLRMLLPRGVAHRFSW
PSIFSGYYVEENYLDKRNNFKANLLVNHARLNKTEMSYFFPRDVKFISLL
RHPVTNFESFYNYQGYSKIFQSYENRSSSVTLHEFFETPMKYLHRALNNK
EEATPLLHNGMLFDLGRDFYNKTYYNDTIIYNEIRELDNEMDMFLIMEHF
DESLILXNGYVPNYGAFR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002522XLOC_002522Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004480TCONS_00004480Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009729Gal-3-0_sulfotransfrase
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0009247glycolipid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0001733galactosylceramide sulfotransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009247 glycolipid biosynthetic process
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0001733 galactosylceramide sulfotransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009729Galactose-3-O-sulfotransferasePFAMPF06990Gal-3-0_sulfotrcoord: 151..357
e-value: 3.9E-42
score: 144.5
NoneNo IPR availableGENE3D3.40.50.300coord: 120..338
e-value: 2.6E-12
score: 46.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 160..295

Blast
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BLAST of TCONS_00004480-protein vs. Swiss-Prot (Human)
Match: G3ST3 (Galactose-3-O-sulfotransferase 3 OS=Homo sapiens GN=GAL3ST3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.693e-23
Identity = 63/201 (31.34%), Postives = 99/201 (49.25%), Query Frame = 0 
Query:  158 LNIVFLKTHKTGSSTLTNILNRFADINNLRMLLP-RGVAHRFSWPSIFSGYYVEENYLDKRNNFKANLLVNHARLNKTEMSYFFPRDVKFISLLRHPVTNFESFYN-YQGYSKIFQSYENRSSSVTLHEFFETPMKYLHRALNNKEEATPLLHNGMLFDLGRDFYNKTYYNDTIIYNEIRELDNEMDMFLIMEHFDESLIL 356
            + + FLKTHKT  +T+ NIL RFA+ +NL + LP     H+F +P  FS ++V             ++L +H R ++ E+    P    ++++LR P   FES ++ Y  Y   F+   N S    L  F   P  Y +RA    E      HN + +DLG D       +   +   IR+++    + +I E+FDESL+L
Sbjct:   64 MTVAFLKTHKTAGTTVQNILFRFAERHNLTVALPHPSCEHQFCYPRNFSAHFVHP------ATRPPHVLASHLRFDRAELERLMPPSTVYVTILREPAAMFESLFSYYNQYCPAFRRVPNAS----LEAFLRAPEAY-YRA---GEHFAMFAHNTLAYDLGGDNERSPRDDAAYLAGLIRQVEEVFSLVMIAEYFDESLVL 250
The following BLAST results are available for this feature:
BLAST of TCONS_00004480-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G3ST32.693e-2331.34Galactose-3-O-sulfotransferase 3 OS=Homo sapiens G... [more]
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